RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 GCKRQ14397 625 aa16.05■□□□□ 0.16
SMCO4-202ENST00000525141 DOK7Q18PE1 504 aa16.05■□□□□ 0.16
SMCO4-202ENST00000525141 CCDC152Q4G0S7 254 aa16.05■□□□□ 0.16
SMCO4-202ENST00000525141 USP50Q70EL3 339 aaPredicted RBP16.05■□□□□ 0.16
SMCO4-202ENST00000525141 DBNDD1Q9H9R9 158 aa16.05■□□□□ 0.16
SMCO4-202ENST00000525141 LMOD1P29536 600 aaPredicted RBP16.04■□□□□ 0.16
SMCO4-202ENST00000525141 DNAAF4Q8WXU2 420 aa16.04■□□□□ 0.16
SMCO4-202ENST00000525141 GREM2Q9H772 168 aa16.04■□□□□ 0.16
SMCO4-202ENST00000525141 PGAP2Q9UHJ9 254 aa16.04■□□□□ 0.16
SMCO4-202ENST00000525141 ZBTB12Q9Y330 459 aaPredicted RBP16.04■□□□□ 0.16
SMCO4-202ENST00000525141 PCNTO95613 3336 aa16.04■□□□□ 0.16
SMCO4-202ENST00000525141 F6X3S4 739 aa16.03■□□□□ 0.16
SMCO4-202ENST00000525141 CSF1RP07333 972 aa16.03■□□□□ 0.16
SMCO4-202ENST00000525141 HSP90B1P14625 803 aaKnown RBP16.03■□□□□ 0.16
SMCO4-202ENST00000525141 CTSWP56202 376 aa16.03■□□□□ 0.16
SMCO4-202ENST00000525141 NEXNQ0ZGT2 675 aa16.03■□□□□ 0.16
SMCO4-202ENST00000525141 TNIP1Q15025 636 aa16.03■□□□□ 0.16
SMCO4-202ENST00000525141 ADARB2Q9NS39 739 aaKnown RBP16.03■□□□□ 0.16
SMCO4-202ENST00000525141 MKRN1Q9UHC7 482 aaKnown RBP16.03■□□□□ 0.16
SMCO4-202ENST00000525141 CNOT7Q9UIV1 285 aaKnown RBP16.03■□□□□ 0.16
SMCO4-202ENST00000525141 CACNA1FO60840 1977 aa16.03■□□□□ 0.16
SMCO4-202ENST00000525141 TMEM88BA6NKF7 163 aa16.02■□□□□ 0.16
SMCO4-202ENST00000525141 PSMD14O00487 310 aa16.02■□□□□ 0.16
SMCO4-202ENST00000525141 FKBP5Q13451 457 aaPredicted RBP16.02■□□□□ 0.16
SMCO4-202ENST00000525141 BEND3Q5T5X7 828 aa16.02■□□□□ 0.16
SMCO4-202ENST00000525141 CST9Q5W186 159 aa16.02■□□□□ 0.16
SMCO4-202ENST00000525141 UBE3BQ7Z3V4 1068 aa16.02■□□□□ 0.16
SMCO4-202ENST00000525141 LINS1Q8NG48 757 aa16.02■□□□□ 0.16
SMCO4-202ENST00000525141 PLA2G12BQ9BX93 195 aa16.02■□□□□ 0.16
SMCO4-202ENST00000525141 MINPP1Q9UNW1 487 aa16.02■□□□□ 0.16
SMCO4-202ENST00000525141 RTL9Q8NET4 1388 aa16.01■□□□□ 0.15
SMCO4-202ENST00000525141 TRAF5O00463 557 aa16.01■□□□□ 0.15
SMCO4-202ENST00000525141 ANKRD18AQ8IVF6 992 aa16.01■□□□□ 0.15
SMCO4-202ENST00000525141 ZC3H12CQ9C0D7 883 aaKnown RBP16.01■□□□□ 0.15
SMCO4-202ENST00000525141 BSDC1Q9NW68 430 aaPredicted RBP16.01■□□□□ 0.15
SMCO4-202ENST00000525141 ECE2O60344 883 aa16■□□□□ 0.15
SMCO4-202ENST00000525141 EGFRP00533 1210 aa16■□□□□ 0.15
SMCO4-202ENST00000525141 VIL1P09327 827 aaKnown RBP16■□□□□ 0.15
SMCO4-202ENST00000525141 TRPM4Q8TD43 1214 aa16■□□□□ 0.15
SMCO4-202ENST00000525141 DPF2Q92785 391 aa16■□□□□ 0.15
SMCO4-202ENST00000525141 EYA3Q99504 573 aa16■□□□□ 0.15
SMCO4-202ENST00000525141 BCL2L13Q9BXK5 485 aa16■□□□□ 0.15
SMCO4-202ENST00000525141 MYH16Q9H6N6 1097 aa16■□□□□ 0.15
SMCO4-202ENST00000525141 ANKIB1Q9P2G1 1089 aa16■□□□□ 0.15
SMCO4-202ENST00000525141 SCN9AQ15858 1988 aa15.99■□□□□ 0.15
SMCO4-202ENST00000525141 UFL1O94874 794 aa15.99■□□□□ 0.15
SMCO4-202ENST00000525141 VEGFBP49765 207 aa15.99■□□□□ 0.15
SMCO4-202ENST00000525141 FOXO4P98177 505 aa15.99■□□□□ 0.15
SMCO4-202ENST00000525141 DLK2Q6UY11 383 aa15.99■□□□□ 0.15
SMCO4-202ENST00000525141 GGA1Q9UJY5 639 aa15.99■□□□□ 0.15
SMCO4-202ENST00000525141 CNTNAP1P78357 1384 aa15.99■□□□□ 0.15
SMCO4-202ENST00000525141 CAPN15O75808 1086 aa15.98■□□□□ 0.15
SMCO4-202ENST00000525141 ATP2B4P23634 1241 aa15.98■□□□□ 0.15
SMCO4-202ENST00000525141 EPHA10Q5JZY3 1008 aa15.98■□□□□ 0.15
SMCO4-202ENST00000525141 COL13A1Q5TAT6 717 aaPredicted RBP15.98■□□□□ 0.15
SMCO4-202ENST00000525141 IFFO2Q5TF58 517 aa15.98■□□□□ 0.15
SMCO4-202ENST00000525141 SAMD7Q7Z3H4 446 aa15.98■□□□□ 0.15
SMCO4-202ENST00000525141 MICALL2Q8IY33 904 aa15.98■□□□□ 0.15
SMCO4-202ENST00000525141 POLR2AP24928 1970 aaKnown RBP15.98■□□□□ 0.15
SMCO4-202ENST00000525141 E9PSI1 815 aa15.97■□□□□ 0.15
SMCO4-202ENST00000525141 SLFN5Q08AF3 891 aa15.97■□□□□ 0.15
SMCO4-202ENST00000525141 TXNRD3Q86VQ6 643 aa15.97■□□□□ 0.15
SMCO4-202ENST00000525141 CDCA7LQ96GN5 454 aa15.97■□□□□ 0.15
SMCO4-202ENST00000525141 CDC5LQ99459 802 aaKnown RBP15.97■□□□□ 0.15
SMCO4-202ENST00000525141 GLIS2Q9BZE0 524 aaPredicted RBP15.97■□□□□ 0.15
SMCO4-202ENST00000525141 XDHP47989 1333 aa15.96■□□□□ 0.15
SMCO4-202ENST00000525141 RASSF10A6NK89 507 aa15.96■□□□□ 0.15
SMCO4-202ENST00000525141 H7C1D1 291 aa15.96■□□□□ 0.15
SMCO4-202ENST00000525141 HSPA1AP0DMV8 641 aaKnown RBP15.96■□□□□ 0.15
SMCO4-202ENST00000525141 HSPA1BP0DMV9 641 aaKnown RBP15.96■□□□□ 0.15
SMCO4-202ENST00000525141 ITGA6P23229 1130 aa15.96■□□□□ 0.15
SMCO4-202ENST00000525141 DEFB115Q30KQ5 88 aa15.96■□□□□ 0.15
SMCO4-202ENST00000525141 MRPL50Q8N5N7 158 aaKnown RBP15.96■□□□□ 0.15
SMCO4-202ENST00000525141 ZC3H15Q8WU90 426 aaKnown RBP15.96■□□□□ 0.15
SMCO4-202ENST00000525141 GMLQ99445 158 aa15.96■□□□□ 0.15
SMCO4-202ENST00000525141 MYH3P11055 1940 aa15.96■□□□□ 0.14
SMCO4-202ENST00000525141 CCT4P50991 539 aaKnown RBP15.95■□□□□ 0.14
SMCO4-202ENST00000525141 FAM161AQ3B820 660 aa15.95■□□□□ 0.14
SMCO4-202ENST00000525141 TBC1D10BQ4KMP7 808 aaPredicted RBP15.95■□□□□ 0.14
SMCO4-202ENST00000525141 TRMT2AQ8IZ69 625 aaKnown RBP15.95■□□□□ 0.14
SMCO4-202ENST00000525141 RPS12P25398 132 aaKnown RBP15.94■□□□□ 0.14
SMCO4-202ENST00000525141 RBM26Q5T8P6 1007 aaKnown RBP15.94■□□□□ 0.14
SMCO4-202ENST00000525141 USP48Q86UV5 1035 aa15.94■□□□□ 0.14
SMCO4-202ENST00000525141 KAZALD1Q96I82 304 aa15.94■□□□□ 0.14
SMCO4-202ENST00000525141 SNAP23O00161 211 aa15.93■□□□□ 0.14
SMCO4-202ENST00000525141 KLRK1P26718 216 aa15.93■□□□□ 0.14
SMCO4-202ENST00000525141 PODNQ7Z5L7 613 aa15.93■□□□□ 0.14
SMCO4-202ENST00000525141 ASTN2O75129 1339 aaPredicted RBP15.93■□□□□ 0.14
SMCO4-202ENST00000525141 IGHMBP2P38935 993 aaKnown RBP15.92■□□□□ 0.14
SMCO4-202ENST00000525141 ZNF280AP59817 542 aaPredicted RBP15.92■□□□□ 0.14
SMCO4-202ENST00000525141 HNRNPUQ00839 825 aaKnown RBP eCLIP15.92■□□□□ 0.14
SMCO4-202ENST00000525141 RSBN1LQ6PCB5 846 aaPredicted RBP15.92■□□□□ 0.14
SMCO4-202ENST00000525141 LMBR1LQ6UX01 489 aa15.92■□□□□ 0.14
SMCO4-202ENST00000525141 CDC37L1Q7L3B6 337 aa15.92■□□□□ 0.14
SMCO4-202ENST00000525141 SSH1Q8WYL5 1049 aa15.92■□□□□ 0.14
SMCO4-202ENST00000525141 MXD3Q9BW11 206 aa15.92■□□□□ 0.14
SMCO4-202ENST00000525141 LEMD3Q9Y2U8 911 aa15.92■□□□□ 0.14
SMCO4-202ENST00000525141 TRPM7Q96QT4 1865 aa15.92■□□□□ 0.14
SMCO4-202ENST00000525141 WDR33Q9C0J8 1336 aaKnown RBP15.92■□□□□ 0.14
SMCO4-202ENST00000525141 IRS2Q9Y4H2 1338 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms