RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 AAASQ9NRG9 546 aa5.32□□□□□ -1.56
CSDE1-209ENST00000525132 TRPM2O94759 1503 aa5.32□□□□□ -1.56
CSDE1-209ENST00000525132 TECPR2O15040 1411 aa5.31□□□□□ -1.56
CSDE1-209ENST00000525132 ZDBF2Q9HCK1 2354 aa5.31□□□□□ -1.56
CSDE1-209ENST00000525132 ASH1LQ9NR48 2969 aaKnown RBP5.31□□□□□ -1.56
CSDE1-209ENST00000525132 PAPPAQ13219 1627 aa5.31□□□□□ -1.56
CSDE1-209ENST00000525132 SPATA31A3Q5VYP0 1347 aa5.31□□□□□ -1.56
CSDE1-209ENST00000525132 FAM187AA6NFU0 413 aa5.31□□□□□ -1.56
CSDE1-209ENST00000525132 POM121CA8CG34 1229 aa5.31□□□□□ -1.56
CSDE1-209ENST00000525132 C11orf95C9JLR9 678 aaPredicted RBP5.31□□□□□ -1.56
CSDE1-209ENST00000525132 SUPT5HO00267 1087 aaKnown RBP5.31□□□□□ -1.56
CSDE1-209ENST00000525132 ST8SIA5O15466 376 aa5.31□□□□□ -1.56
CSDE1-209ENST00000525132 UBTFP17480 764 aaKnown RBP5.31□□□□□ -1.56
CSDE1-209ENST00000525132 FSHRP23945 695 aa5.31□□□□□ -1.56
CSDE1-209ENST00000525132 MCCD1P59942 119 aaPredicted RBP5.31□□□□□ -1.56
CSDE1-209ENST00000525132 VAC14Q08AM6 782 aa5.31□□□□□ -1.56
CSDE1-209ENST00000525132 NFX1Q12986 1120 aaKnown RBP5.31□□□□□ -1.56
CSDE1-209ENST00000525132 WASHC4Q2M389 1173 aa5.31□□□□□ -1.56
CSDE1-209ENST00000525132 CTC1Q2NKJ3 1217 aa5.31□□□□□ -1.56
CSDE1-209ENST00000525132 CIAPIN1Q6FI81 312 aa5.31□□□□□ -1.56
CSDE1-209ENST00000525132 ZBTB33Q86T24 672 aa5.31□□□□□ -1.56
CSDE1-209ENST00000525132 GUCD1Q96NT3 240 aa5.31□□□□□ -1.56
CSDE1-209ENST00000525132 KCTD15Q96SI1 283 aaPredicted RBP5.31□□□□□ -1.56
CSDE1-209ENST00000525132 SBF2Q86WG5 1849 aa5.31□□□□□ -1.56
CSDE1-209ENST00000525132 TTC24A2A3L6 582 aaPredicted RBP5.3□□□□□ -1.56
CSDE1-209ENST00000525132 FAM181BA6NEQ2 426 aa5.3□□□□□ -1.56
CSDE1-209ENST00000525132 LILRA1O75019 489 aa5.3□□□□□ -1.56
CSDE1-209ENST00000525132 ABL2P42684 1182 aa5.3□□□□□ -1.56
CSDE1-209ENST00000525132 AGERQ15109 404 aa5.3□□□□□ -1.56
CSDE1-209ENST00000525132 KDF1Q8NAX2 398 aaPredicted RBP5.3□□□□□ -1.56
CSDE1-209ENST00000525132 UCN2Q96RP3 112 aa5.3□□□□□ -1.56
CSDE1-209ENST00000525132 TFCP2L1Q9NZI6 479 aa5.3□□□□□ -1.56
CSDE1-209ENST00000525132 HFM1A2PYH4 1435 aa5.3□□□□□ -1.56
CSDE1-209ENST00000525132 C5orf42Q9H799 3197 aa5.3□□□□□ -1.56
CSDE1-209ENST00000525132 CNTNAP4Q9C0A0 1308 aa5.29□□□□□ -1.56
CSDE1-209ENST00000525132 ZNF462Q96JM2 2506 aa5.29□□□□□ -1.56
CSDE1-209ENST00000525132 A0A1W2PPC1 479 aa5.29□□□□□ -1.56
CSDE1-209ENST00000525132 SOX11P35716 441 aa5.29□□□□□ -1.56
CSDE1-209ENST00000525132 NBPF20Q3BBV1 942 aa5.29□□□□□ -1.56
CSDE1-209ENST00000525132 Q6ZVU0 165 aa5.29□□□□□ -1.56
CSDE1-209ENST00000525132 VASH1Q7L8A9 365 aaPredicted RBP5.29□□□□□ -1.56
CSDE1-209ENST00000525132 LRRC4BQ9NT99 713 aa5.29□□□□□ -1.56
CSDE1-209ENST00000525132 CEP126Q9P2H0 1117 aa5.29□□□□□ -1.56
CSDE1-209ENST00000525132 CRB1P82279 1406 aa5.29□□□□□ -1.56
CSDE1-209ENST00000525132 LRRIQ1Q96JM4 1722 aa5.28□□□□□ -1.56
CSDE1-209ENST00000525132 DUOX2Q9NRD8 1548 aa5.28□□□□□ -1.56
CSDE1-209ENST00000525132 USP34Q70CQ2 3546 aa5.28□□□□□ -1.56
CSDE1-209ENST00000525132 PIK3C2BO00750 1634 aa5.28□□□□□ -1.56
CSDE1-209ENST00000525132 PKN2Q16513 984 aaKnown RBP5.28□□□□□ -1.56
CSDE1-209ENST00000525132 PPP1R26Q5T8A7 1209 aaPredicted RBP5.28□□□□□ -1.56
CSDE1-209ENST00000525132 TRIM46Q7Z4K8 759 aa5.28□□□□□ -1.56
CSDE1-209ENST00000525132 CCDC116Q8IYX3 515 aa5.28□□□□□ -1.56
CSDE1-209ENST00000525132 MAFAQ8NHW3 353 aaPredicted RBP5.28□□□□□ -1.56
CSDE1-209ENST00000525132 ITPKCQ96DU7 683 aa5.28□□□□□ -1.56
CSDE1-209ENST00000525132 CCDC85AQ96PX6 553 aaPredicted RBP5.28□□□□□ -1.56
CSDE1-209ENST00000525132 HNRNPABQ99729 332 aaKnown RBP5.28□□□□□ -1.56
CSDE1-209ENST00000525132 PRM3Q9NNZ6 103 aa5.28□□□□□ -1.56
CSDE1-209ENST00000525132 OVOS2A0A0G2JMS6 1433 aa5.28□□□□□ -1.56
CSDE1-209ENST00000525132 OVOS2A0A0J9YW53 1432 aa5.28□□□□□ -1.56
CSDE1-209ENST00000525132 USP6P35125 1406 aa5.28□□□□□ -1.56
CSDE1-209ENST00000525132 OVOS2Q6IE36 1432 aa5.28□□□□□ -1.56
CSDE1-209ENST00000525132 SSH2Q76I76 1423 aa5.28□□□□□ -1.56
CSDE1-209ENST00000525132 CFAP65Q6ZU64 1925 aaKnown RBP5.28□□□□□ -1.56
CSDE1-209ENST00000525132 PEAK1Q9H792 1746 aa5.28□□□□□ -1.56
CSDE1-209ENST00000525132 ERVH48-1M5A8F1 160 aa5.27□□□□□ -1.57
CSDE1-209ENST00000525132 TRAK2O60296 914 aa5.27□□□□□ -1.57
CSDE1-209ENST00000525132 ERVK-9P63128 1117 aa5.27□□□□□ -1.57
CSDE1-209ENST00000525132 ESCO1Q5FWF5 840 aa5.27□□□□□ -1.57
CSDE1-209ENST00000525132 TMEM31Q5JXX7 168 aa5.27□□□□□ -1.57
CSDE1-209ENST00000525132 DZIP3Q86Y13 1208 aaKnown RBP5.27□□□□□ -1.57
CSDE1-209ENST00000525132 MEIOBQ8N635 442 aa5.27□□□□□ -1.57
CSDE1-209ENST00000525132 ERBINQ96RT1 1412 aa5.27□□□□□ -1.57
CSDE1-209ENST00000525132 EPHX3Q9H6B9 360 aa5.27□□□□□ -1.57
CSDE1-209ENST00000525132 ZFAND3Q9H8U3 227 aa5.27□□□□□ -1.57
CSDE1-209ENST00000525132 RRBP1Q9P2E9 1410 aaKnown RBP5.27□□□□□ -1.57
CSDE1-209ENST00000525132 PCDHB9Q9Y5E1 797 aa5.27□□□□□ -1.57
CSDE1-209ENST00000525132 PAPPA2Q9BXP8 1791 aa5.27□□□□□ -1.57
CSDE1-209ENST00000525132 FYCO1Q9BQS8 1478 aa5.26□□□□□ -1.57
CSDE1-209ENST00000525132 ARHGEF5Q12774 1597 aa5.26□□□□□ -1.57
CSDE1-209ENST00000525132 PIK3CDO00329 1044 aa5.26□□□□□ -1.57
CSDE1-209ENST00000525132 ADD1P35611 737 aaKnown RBP5.26□□□□□ -1.57
CSDE1-209ENST00000525132 WDR4P57081 412 aaKnown RBP5.26□□□□□ -1.57
CSDE1-209ENST00000525132 EIF4G2P78344 907 aaKnown RBP eCLIP5.26□□□□□ -1.57
CSDE1-209ENST00000525132 COL23A1Q86Y22 540 aaPredicted RBP5.26□□□□□ -1.57
CSDE1-209ENST00000525132 NFATC2IPQ8NCF5 419 aa5.26□□□□□ -1.57
CSDE1-209ENST00000525132 ZNF592Q92610 1267 aa5.26□□□□□ -1.57
CSDE1-209ENST00000525132 KRTAP4-12Q9BQ66 201 aa5.26□□□□□ -1.57
CSDE1-209ENST00000525132 STRN4Q9NRL3 753 aa5.26□□□□□ -1.57
CSDE1-209ENST00000525132 EMILIN1Q9Y6C2 1016 aa5.26□□□□□ -1.57
CSDE1-209ENST00000525132 WASF2Q9Y6W5 498 aa5.26□□□□□ -1.57
CSDE1-209ENST00000525132 PLEKHG1Q9ULL1 1385 aa5.26□□□□□ -1.57
CSDE1-209ENST00000525132 KIF27Q86VH2 1401 aa5.25□□□□□ -1.57
CSDE1-209ENST00000525132 A0A0G2JLW4 131 aa5.25□□□□□ -1.57
CSDE1-209ENST00000525132 MED19A0JLT2 244 aaPredicted RBP5.25□□□□□ -1.57
CSDE1-209ENST00000525132 RAD21O60216 631 aa5.25□□□□□ -1.57
CSDE1-209ENST00000525132 LORP23490 312 aaPredicted RBP5.25□□□□□ -1.57
CSDE1-209ENST00000525132 DHX9Q08211 1270 aaKnown RBP5.25□□□□□ -1.57
CSDE1-209ENST00000525132 ARID5BQ14865 1188 aa5.25□□□□□ -1.57
CSDE1-209ENST00000525132 TSGA10IPQ3SY00 556 aa5.25□□□□□ -1.57
CSDE1-209ENST00000525132 FAM161BQ96MY7 647 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms