RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-204ENST00000524926 CPA1P15085 419 aa18.34■□□□□ 0.53
BEST1-204ENST00000524926 NUCB2P80303 420 aa18.34■□□□□ 0.53
BEST1-204ENST00000524926 CCDC129Q6ZRS4 1044 aa18.34■□□□□ 0.53
BEST1-204ENST00000524926 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.34■□□□□ 0.53
BEST1-204ENST00000524926 KCNB2Q92953 911 aa18.34■□□□□ 0.53
BEST1-204ENST00000524926 GBP4Q96PP9 640 aa18.34■□□□□ 0.53
BEST1-204ENST00000524926 COL5A3P25940 1745 aaPredicted RBP18.34■□□□□ 0.53
BEST1-204ENST00000524926 RNF20Q5VTR2 975 aa18.34■□□□□ 0.53
BEST1-204ENST00000524926 SMIM5Q71RC9 77 aa18.34■□□□□ 0.53
BEST1-204ENST00000524926 SLC27A2O14975 620 aa18.33■□□□□ 0.53
BEST1-204ENST00000524926 NTSR2O95665 410 aa18.33■□□□□ 0.53
BEST1-204ENST00000524926 CUL4AQ13619 759 aa18.33■□□□□ 0.53
BEST1-204ENST00000524926 GSE1Q14687 1217 aa18.33■□□□□ 0.53
BEST1-204ENST00000524926 CLEC4GQ6UXB4 293 aa18.33■□□□□ 0.53
BEST1-204ENST00000524926 TTC14Q96N46 770 aa18.33■□□□□ 0.53
BEST1-204ENST00000524926 RIC1Q4ADV7 1423 aa18.33■□□□□ 0.53
BEST1-204ENST00000524926 CNTNAP4Q9C0A0 1308 aa18.33■□□□□ 0.52
BEST1-204ENST00000524926 HSP90B1P14625 803 aaKnown RBP18.33■□□□□ 0.52
BEST1-204ENST00000524926 AK2P54819 239 aa18.33■□□□□ 0.52
BEST1-204ENST00000524926 CYP46A1Q9Y6A2 500 aa18.33■□□□□ 0.52
BEST1-204ENST00000524926 THSD7AQ9UPZ6 1657 aa18.33■□□□□ 0.52
BEST1-204ENST00000524926 PDE8BO95263 885 aa18.32■□□□□ 0.52
BEST1-204ENST00000524926 SLFNL1Q499Z3 407 aa18.32■□□□□ 0.52
BEST1-204ENST00000524926 MPHOSPH8Q99549 860 aa18.32■□□□□ 0.52
BEST1-204ENST00000524926 LARP6Q9BRS8 491 aaKnown RBP18.32■□□□□ 0.52
BEST1-204ENST00000524926 CCNL1Q9UK58 526 aaPredicted RBP18.32■□□□□ 0.52
BEST1-204ENST00000524926 TRPC5Q9UL62 973 aaPredicted RBP18.32■□□□□ 0.52
BEST1-204ENST00000524926 CCDC152Q4G0S7 254 aa18.32■□□□□ 0.52
BEST1-204ENST00000524926 TM6SF1Q9BZW5 370 aa18.32■□□□□ 0.52
BEST1-204ENST00000524926 SEC31BQ9NQW1 1179 aa18.32■□□□□ 0.52
BEST1-204ENST00000524926 PDRG1Q9NUG6 133 aa18.32■□□□□ 0.52
BEST1-204ENST00000524926 DDX11L8A8MPP1 907 aa18.31■□□□□ 0.52
BEST1-204ENST00000524926 PKP1Q13835 747 aa18.31■□□□□ 0.52
BEST1-204ENST00000524926 BICDL1Q6ZP65 573 aa18.31■□□□□ 0.52
BEST1-204ENST00000524926 VGLL2Q8N8G2 317 aa18.31■□□□□ 0.52
BEST1-204ENST00000524926 HELBQ8NG08 1087 aaPredicted RBP18.31■□□□□ 0.52
BEST1-204ENST00000524926 ZSWIM6Q9HCJ5 1215 aa18.31■□□□□ 0.52
BEST1-204ENST00000524926 ZNF831Q5JPB2 1677 aa18.31■□□□□ 0.52
BEST1-204ENST00000524926 SCARF1Q14162 830 aa18.31■□□□□ 0.52
BEST1-204ENST00000524926 RUFY3Q7L099 469 aa18.31■□□□□ 0.52
BEST1-204ENST00000524926 INTS4Q96HW7 963 aaKnown RBP18.31■□□□□ 0.52
BEST1-204ENST00000524926 HELLSQ9NRZ9 838 aa18.31■□□□□ 0.52
BEST1-204ENST00000524926 BTAF1O14981 1849 aa18.31■□□□□ 0.52
BEST1-204ENST00000524926 PSMA5P28066 241 aa18.3■□□□□ 0.52
BEST1-204ENST00000524926 SEPT12Q8IYM1 358 aa18.3■□□□□ 0.52
BEST1-204ENST00000524926 LIMCH1Q9UPQ0 1083 aa18.3■□□□□ 0.52
BEST1-204ENST00000524926 MROH5Q6ZUA9 1318 aa18.3■□□□□ 0.52
BEST1-204ENST00000524926 GNPATO15228 680 aa18.3■□□□□ 0.52
BEST1-204ENST00000524926 RNF113AO15541 343 aaKnown RBP18.3■□□□□ 0.52
BEST1-204ENST00000524926 ZAP70P43403 619 aa18.3■□□□□ 0.52
BEST1-204ENST00000524926 RC3H1Q5TC82 1133 aaKnown RBP18.3■□□□□ 0.52
BEST1-204ENST00000524926 TICAM2Q86XR7 235 aa18.3■□□□□ 0.52
BEST1-204ENST00000524926 RPS6KA4O75676 772 aa18.29■□□□□ 0.52
BEST1-204ENST00000524926 VPS53Q5VIR6 699 aa18.29■□□□□ 0.52
BEST1-204ENST00000524926 HMG20BQ9P0W2 317 aa18.29■□□□□ 0.52
BEST1-204ENST00000524926 ONECUT3O60422 494 aaPredicted RBP18.29■□□□□ 0.52
BEST1-204ENST00000524926 LRRFIP1Q32MZ4 808 aaKnown RBP18.29■□□□□ 0.52
BEST1-204ENST00000524926 ZMYM1Q5SVZ6 1142 aa18.29■□□□□ 0.52
BEST1-204ENST00000524926 USPL1Q5W0Q7 1092 aa18.29■□□□□ 0.52
BEST1-204ENST00000524926 U3KPZ7 1027 aaPredicted RBP18.29■□□□□ 0.52
BEST1-204ENST00000524926 GTF2E1P29083 439 aaPredicted RBP18.28■□□□□ 0.52
BEST1-204ENST00000524926 IGHMBP2P38935 993 aaKnown RBP18.28■□□□□ 0.52
BEST1-204ENST00000524926 PUM3Q15397 648 aaKnown RBP18.28■□□□□ 0.52
BEST1-204ENST00000524926 PI16Q6UXB8 463 aa18.28■□□□□ 0.52
BEST1-204ENST00000524926 CYP2E1P05181 493 aaPredicted RBP18.28■□□□□ 0.52
BEST1-204ENST00000524926 ERFEQ4G0M1 354 aa18.28■□□□□ 0.52
BEST1-204ENST00000524926 TAF6LQ9Y6J9 622 aa18.28■□□□□ 0.52
BEST1-204ENST00000524926 NHSQ6T4R5 1651 aa18.27■□□□□ 0.52
BEST1-204ENST00000524926 TRAK2O60296 914 aa18.27■□□□□ 0.52
BEST1-204ENST00000524926 ZPR1O75312 459 aa18.27■□□□□ 0.52
BEST1-204ENST00000524926 TBC1D9BQ66K14 1250 aa18.27■□□□□ 0.52
BEST1-204ENST00000524926 BLOC1S2Q6QNY1 142 aa18.27■□□□□ 0.52
BEST1-204ENST00000524926 LPIN2Q92539 896 aa18.27■□□□□ 0.52
BEST1-204ENST00000524926 QTRT2Q9H974 415 aaKnown RBP18.27■□□□□ 0.52
BEST1-204ENST00000524926 SRP68Q9UHB9 627 aaKnown RBP18.27■□□□□ 0.52
BEST1-204ENST00000524926 NARFQ9UHQ1 456 aa18.27■□□□□ 0.52
BEST1-204ENST00000524926 RTCBQ9Y3I0 505 aaKnown RBP18.27■□□□□ 0.52
BEST1-204ENST00000524926 SPEF2Q9C093 1822 aa18.27■□□□□ 0.51
BEST1-204ENST00000524926 MCAMP43121 646 aa18.27■□□□□ 0.51
BEST1-204ENST00000524926 BCORQ6W2J9 1755 aa18.26■□□□□ 0.51
BEST1-204ENST00000524926 ATRNO75882 1429 aa18.26■□□□□ 0.51
BEST1-204ENST00000524926 DDX60Q8IY21 1712 aaKnown RBP18.26■□□□□ 0.51
BEST1-204ENST00000524926 WASHC4Q2M389 1173 aa18.26■□□□□ 0.51
BEST1-204ENST00000524926 CCDC102BQ68D86 513 aa18.26■□□□□ 0.51
BEST1-204ENST00000524926 ABCC12Q96J65 1359 aa18.26■□□□□ 0.51
BEST1-204ENST00000524926 RPAP1Q9BWH6 1393 aaPredicted RBP18.26■□□□□ 0.51
BEST1-204ENST00000524926 BAG4O95429 457 aaKnown RBP18.25■□□□□ 0.51
BEST1-204ENST00000524926 TSGA10IPQ3SY00 556 aa18.25■□□□□ 0.51
BEST1-204ENST00000524926 BCL2L12Q9HB09 334 aa18.25■□□□□ 0.51
BEST1-204ENST00000524926 MAST3O60307 1309 aa18.25■□□□□ 0.51
BEST1-204ENST00000524926 GOLGA6L22H0YM25 854 aa18.25■□□□□ 0.51
BEST1-204ENST00000524926 ZFYP08048 801 aaPredicted RBP18.25■□□□□ 0.51
BEST1-204ENST00000524926 SLC5A1P13866 664 aa18.25■□□□□ 0.51
BEST1-204ENST00000524926 PHKA1P46020 1223 aa18.25■□□□□ 0.51
BEST1-204ENST00000524926 KRT32Q14532 448 aa18.25■□□□□ 0.51
BEST1-204ENST00000524926 SETDB2Q96T68 719 aa18.25■□□□□ 0.51
BEST1-204ENST00000524926 ZDHHC9Q9Y397 364 aa18.25■□□□□ 0.51
BEST1-204ENST00000524926 SNAP23O00161 211 aa18.24■□□□□ 0.51
BEST1-204ENST00000524926 FGFR2P21802 821 aa18.24■□□□□ 0.51
BEST1-204ENST00000524926 COL9A3Q14050 684 aaPredicted RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms