RNA–Protein interactions for RNA: ENST00000524852.1

CAVIN3-202, Transcript of caveolae associated protein 3, humanhuman

TSL 3

Gene CAVIN3, Length 605 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAVIN3-202ENST00000524852 TNIP1Q15025 636 aa20.43■□□□□ 0.86
CAVIN3-202ENST00000524852 RBM46Q8TBY0 533 aaKnown RBP20.43■□□□□ 0.86
CAVIN3-202ENST00000524852 FRAT1Q92837 279 aaPredicted RBP20.43■□□□□ 0.86
CAVIN3-202ENST00000524852 L3MBTL3Q96JM7 780 aaPredicted RBP20.43■□□□□ 0.86
CAVIN3-202ENST00000524852 GJA3Q9Y6H8 435 aa20.43■□□□□ 0.86
CAVIN3-202ENST00000524852 UTYO14607 1347 aa20.43■□□□□ 0.86
CAVIN3-202ENST00000524852 NBPF7P0C2Y1 421 aaPredicted RBP20.42■□□□□ 0.86
CAVIN3-202ENST00000524852 LMOD1P29536 600 aaPredicted RBP20.42■□□□□ 0.86
CAVIN3-202ENST00000524852 POLLQ9UGP5 575 aa20.42■□□□□ 0.86
CAVIN3-202ENST00000524852 MINPP1Q9UNW1 487 aa20.42■□□□□ 0.86
CAVIN3-202ENST00000524852 RIMBP2O15034 1052 aa20.41■□□□□ 0.86
CAVIN3-202ENST00000524852 SLC51AQ86UW1 340 aa20.41■□□□□ 0.86
CAVIN3-202ENST00000524852 HACL1Q9UJ83 578 aa20.41■□□□□ 0.86
CAVIN3-202ENST00000524852 ZNF541Q9H0D2 1346 aa20.41■□□□□ 0.86
CAVIN3-202ENST00000524852 KCNJ4P48050 445 aa20.4■□□□□ 0.86
CAVIN3-202ENST00000524852 FSTL1Q12841 308 aa20.4■□□□□ 0.86
CAVIN3-202ENST00000524852 CIAPIN1Q6FI81 312 aa20.4■□□□□ 0.86
CAVIN3-202ENST00000524852 SUCLG2Q96I99 432 aa20.4■□□□□ 0.86
CAVIN3-202ENST00000524852 USP44Q9H0E7 712 aa20.4■□□□□ 0.86
CAVIN3-202ENST00000524852 LEMD3Q9Y2U8 911 aa20.4■□□□□ 0.86
CAVIN3-202ENST00000524852 MYH3P11055 1940 aa20.39■□□□□ 0.86
CAVIN3-202ENST00000524852 TAF1P21675 1872 aa20.39■□□□□ 0.86
CAVIN3-202ENST00000524852 UBTFL1P0CB47 393 aaPredicted RBP20.39■□□□□ 0.85
CAVIN3-202ENST00000524852 ZKSCAN2Q63HK3 967 aa20.39■□□□□ 0.85
CAVIN3-202ENST00000524852 ATF7IPQ6VMQ6 1270 aa20.39■□□□□ 0.85
CAVIN3-202ENST00000524852 LDHAL6AQ6ZMR3 332 aa20.39■□□□□ 0.85
CAVIN3-202ENST00000524852 PNMA8AQ86V59 439 aaPredicted RBP20.39■□□□□ 0.85
CAVIN3-202ENST00000524852 SMC1BQ8NDV3 1235 aa20.39■□□□□ 0.85
CAVIN3-202ENST00000524852 BCAR3O75815 825 aa20.38■□□□□ 0.85
CAVIN3-202ENST00000524852 CXCL9Q07325 125 aa20.38■□□□□ 0.85
CAVIN3-202ENST00000524852 CNNM1Q9NRU3 951 aa20.38■□□□□ 0.85
CAVIN3-202ENST00000524852 LRRC37AA6NMS7 1700 aa20.37■□□□□ 0.85
CAVIN3-202ENST00000524852 EPHA10Q5JZY3 1008 aa20.37■□□□□ 0.85
CAVIN3-202ENST00000524852 BICC1Q9H694 974 aaKnown RBP20.37■□□□□ 0.85
CAVIN3-202ENST00000524852 POTECB2RU33 542 aa20.36■□□□□ 0.85
CAVIN3-202ENST00000524852 RAD17O75943 681 aa20.36■□□□□ 0.85
CAVIN3-202ENST00000524852 GNAI3P08754 354 aa20.36■□□□□ 0.85
CAVIN3-202ENST00000524852 DOK7Q18PE1 504 aa20.36■□□□□ 0.85
CAVIN3-202ENST00000524852 INTS3Q68E01 1043 aaKnown RBP20.36■□□□□ 0.85
CAVIN3-202ENST00000524852 DBNDD1Q9H9R9 158 aa20.36■□□□□ 0.85
CAVIN3-202ENST00000524852 WDR90Q96KV7 1748 aa20.36■□□□□ 0.85
CAVIN3-202ENST00000524852 ECE2O60344 883 aa20.35■□□□□ 0.85
CAVIN3-202ENST00000524852 EPHX2P34913 555 aa20.35■□□□□ 0.85
CAVIN3-202ENST00000524852 CHRNDQ07001 517 aa20.35■□□□□ 0.85
CAVIN3-202ENST00000524852 RABL6Q3YEC7 729 aaPredicted RBP20.35■□□□□ 0.85
CAVIN3-202ENST00000524852 TAF1DQ9H5J8 278 aaPredicted RBP20.35■□□□□ 0.85
CAVIN3-202ENST00000524852 ZNF804BA4D1E1 1349 aa20.34■□□□□ 0.85
CAVIN3-202ENST00000524852 TRIM27P14373 513 aa20.34■□□□□ 0.85
CAVIN3-202ENST00000524852 PODNQ7Z5L7 613 aa20.34■□□□□ 0.85
CAVIN3-202ENST00000524852 FTSJ3Q8IY81 847 aaKnown RBP20.34■□□□□ 0.85
CAVIN3-202ENST00000524852 MS4A1P11836 297 aa20.33■□□□□ 0.85
CAVIN3-202ENST00000524852 EAPPQ56P03 285 aaPredicted RBP20.33■□□□□ 0.85
CAVIN3-202ENST00000524852 KAZALD1Q96I82 304 aa20.33■□□□□ 0.85
CAVIN3-202ENST00000524852 CLEC11AQ9Y240 323 aa20.33■□□□□ 0.85
CAVIN3-202ENST00000524852 RPS12P25398 132 aaKnown RBP20.32■□□□□ 0.84
CAVIN3-202ENST00000524852 CHADLQ6NUI6 762 aa20.32■□□□□ 0.84
CAVIN3-202ENST00000524852 LDHDQ86WU2 507 aa20.32■□□□□ 0.84
CAVIN3-202ENST00000524852 CLUAP1Q96AJ1 413 aa20.32■□□□□ 0.84
CAVIN3-202ENST00000524852 ZNF594Q96JF6 807 aaPredicted RBP20.32■□□□□ 0.84
CAVIN3-202ENST00000524852 GPR101Q96P66 508 aaPredicted RBP20.32■□□□□ 0.84
CAVIN3-202ENST00000524852 COA1Q9GZY4 146 aa20.32■□□□□ 0.84
CAVIN3-202ENST00000524852 MED23Q9ULK4 1368 aa20.32■□□□□ 0.84
CAVIN3-202ENST00000524852 DUOX1Q9NRD9 1551 aa20.31■□□□□ 0.84
CAVIN3-202ENST00000524852 YDJCA8MPS7 323 aa20.31■□□□□ 0.84
CAVIN3-202ENST00000524852 H7C1D1 291 aa20.31■□□□□ 0.84
CAVIN3-202ENST00000524852 PLIN1O60240 522 aa20.31■□□□□ 0.84
CAVIN3-202ENST00000524852 HSPA6P17066 643 aa20.31■□□□□ 0.84
CAVIN3-202ENST00000524852 GMPSP49915 693 aaPredicted RBP20.31■□□□□ 0.84
CAVIN3-202ENST00000524852 USP50Q70EL3 339 aaPredicted RBP20.31■□□□□ 0.84
CAVIN3-202ENST00000524852 ANKRD44Q8N8A2 993 aa20.31■□□□□ 0.84
CAVIN3-202ENST00000524852 GPRC5DQ9NZD1 345 aa20.31■□□□□ 0.84
CAVIN3-202ENST00000524852 MROH5Q6ZUA9 1318 aa20.3■□□□□ 0.84
CAVIN3-202ENST00000524852 COL4A1P02462 1669 aa20.3■□□□□ 0.84
CAVIN3-202ENST00000524852 COL4A5P29400 1685 aa20.3■□□□□ 0.84
CAVIN3-202ENST00000524852 DPF2Q92785 391 aa20.3■□□□□ 0.84
CAVIN3-202ENST00000524852 ADARB2Q9NS39 739 aaKnown RBP20.3■□□□□ 0.84
CAVIN3-202ENST00000524852 SCN4AP35499 1836 aa20.3■□□□□ 0.84
CAVIN3-202ENST00000524852 PSMD14O00487 310 aa20.29■□□□□ 0.84
CAVIN3-202ENST00000524852 TAF5LO75529 589 aa20.29■□□□□ 0.84
CAVIN3-202ENST00000524852 SCNN1DP51172 638 aa20.29■□□□□ 0.84
CAVIN3-202ENST00000524852 APLP1P51693 650 aa20.29■□□□□ 0.84
CAVIN3-202ENST00000524852 DZIP1LQ8IYY4 767 aaKnown RBP20.29■□□□□ 0.84
CAVIN3-202ENST00000524852 HELBQ8NG08 1087 aaPredicted RBP20.29■□□□□ 0.84
CAVIN3-202ENST00000524852 USP17L3A6NCW0 530 aa20.28■□□□□ 0.84
CAVIN3-202ENST00000524852 USP17L4A6NCW7 530 aa20.28■□□□□ 0.84
CAVIN3-202ENST00000524852 EPS15P42566 896 aa20.28■□□□□ 0.84
CAVIN3-202ENST00000524852 USP17L1Q7RTZ2 530 aa20.28■□□□□ 0.84
CAVIN3-202ENST00000524852 CNOT7Q9UIV1 285 aaKnown RBP20.28■□□□□ 0.84
CAVIN3-202ENST00000524852 LRRFIP2Q9Y608 721 aaKnown RBP20.28■□□□□ 0.84
CAVIN3-202ENST00000524852 GNAI2P04899 355 aa20.27■□□□□ 0.84
CAVIN3-202ENST00000524852 VIL1P09327 827 aaKnown RBP20.27■□□□□ 0.84
CAVIN3-202ENST00000524852 UBE4AQ14139 1066 aa20.27■□□□□ 0.84
CAVIN3-202ENST00000524852 METTL24Q5JXM2 366 aa20.27■□□□□ 0.84
CAVIN3-202ENST00000524852 C15orf52Q6ZUT6 534 aaKnown RBP20.27■□□□□ 0.84
CAVIN3-202ENST00000524852 ZNF804AQ7Z570 1209 aa20.27■□□□□ 0.84
CAVIN3-202ENST00000524852 MEIS3Q99687 375 aa20.27■□□□□ 0.84
CAVIN3-202ENST00000524852 FBXO3Q9UK99 471 aa20.27■□□□□ 0.84
CAVIN3-202ENST00000524852 AGBL3Q8NEM8 1001 aa20.26■□□□□ 0.83
CAVIN3-202ENST00000524852 RCAN3Q9UKA8 241 aa20.26■□□□□ 0.83
CAVIN3-202ENST00000524852 RIPOR2Q9Y4F9 1068 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms