RNA–Protein interactions for RNA: ENST00000524775.1

CSTF3-205, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 4

Gene CSTF3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-205ENST00000524775 CNTROBQ8N137 903 aa14.33□□□□□ -0.12
CSTF3-205ENST00000524775 EVI5LQ96CN4 794 aa14.33□□□□□ -0.12
CSTF3-205ENST00000524775 HAUS7Q99871 368 aa14.33□□□□□ -0.12
CSTF3-205ENST00000524775 BOLA2Q9H3K6 86 aa14.33□□□□□ -0.12
CSTF3-205ENST00000524775 EIF5BO60841 1220 aaKnown RBP14.32□□□□□ -0.12
CSTF3-205ENST00000524775 HMGB2P26583 209 aaKnown RBP14.32□□□□□ -0.12
CSTF3-205ENST00000524775 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.32□□□□□ -0.12
CSTF3-205ENST00000524775 AKAP2Q9Y2D5 859 aa14.32□□□□□ -0.12
CSTF3-205ENST00000524775 SGSM2O43147 1006 aa14.31□□□□□ -0.12
CSTF3-205ENST00000524775 PDE8BO95263 885 aa14.31□□□□□ -0.12
CSTF3-205ENST00000524775 METTL24Q5JXM2 366 aa14.31□□□□□ -0.12
CSTF3-205ENST00000524775 CASC1Q6TDU7 716 aa14.31□□□□□ -0.12
CSTF3-205ENST00000524775 TPTE2Q6XPS3 522 aa14.31□□□□□ -0.12
CSTF3-205ENST00000524775 NBPF5PQ86XG9 351 aaPredicted RBP14.31□□□□□ -0.12
CSTF3-205ENST00000524775 EDC3Q96F86 508 aaKnown RBP14.31□□□□□ -0.12
CSTF3-205ENST00000524775 XAGE2Q96GT9 111 aa14.31□□□□□ -0.12
CSTF3-205ENST00000524775 DDRGK1Q96HY6 314 aa14.31□□□□□ -0.12
CSTF3-205ENST00000524775 NEUROD6Q96NK8 337 aa14.31□□□□□ -0.12
CSTF3-205ENST00000524775 SNRKQ9NRH2 765 aa14.31□□□□□ -0.12
CSTF3-205ENST00000524775 CNNM1Q9NRU3 951 aa14.31□□□□□ -0.12
CSTF3-205ENST00000524775 MROH5Q6ZUA9 1318 aa14.31□□□□□ -0.12
CSTF3-205ENST00000524775 DOCK2Q92608 1830 aa14.31□□□□□ -0.12
CSTF3-205ENST00000524775 CARMIL3Q8ND23 1372 aa14.31□□□□□ -0.12
CSTF3-205ENST00000524775 ATP2B3Q16720 1220 aa14.3□□□□□ -0.12
CSTF3-205ENST00000524775 COL23A1Q86Y22 540 aaPredicted RBP14.3□□□□□ -0.12
CSTF3-205ENST00000524775 IL17RAQ96F46 866 aa14.3□□□□□ -0.12
CSTF3-205ENST00000524775 CAMKK2Q96RR4 588 aa14.3□□□□□ -0.12
CSTF3-205ENST00000524775 REC8O95072 547 aa14.29□□□□□ -0.12
CSTF3-205ENST00000524775 DDR1Q08345 913 aa14.29□□□□□ -0.12
CSTF3-205ENST00000524775 CCDC24Q8N4L8 307 aa14.29□□□□□ -0.12
CSTF3-205ENST00000524775 NDUFB9Q9Y6M9 179 aa14.29□□□□□ -0.12
CSTF3-205ENST00000524775 RFX7Q2KHR2 1363 aa14.29□□□□□ -0.12
CSTF3-205ENST00000524775 EPB41L2O43491 1005 aaKnown RBP14.28□□□□□ -0.12
CSTF3-205ENST00000524775 PRR5LQ6MZQ0 368 aa14.28□□□□□ -0.12
CSTF3-205ENST00000524775 HELBQ8NG08 1087 aaPredicted RBP14.28□□□□□ -0.12
CSTF3-205ENST00000524775 ZNF512BQ96KM6 892 aaPredicted RBP14.28□□□□□ -0.12
CSTF3-205ENST00000524775 LSG1Q9H089 658 aaKnown RBP14.28□□□□□ -0.12
CSTF3-205ENST00000524775 MYH13Q9UKX3 1938 aa14.27□□□□□ -0.12
CSTF3-205ENST00000524775 PNPLA7Q6ZV29 1317 aa14.27□□□□□ -0.12
CSTF3-205ENST00000524775 POLRMTO00411 1230 aaKnown RBP14.27□□□□□ -0.13
CSTF3-205ENST00000524775 IGHMBP2P38935 993 aaKnown RBP14.27□□□□□ -0.13
CSTF3-205ENST00000524775 SCARF1Q14162 830 aa14.27□□□□□ -0.13
CSTF3-205ENST00000524775 TICAM2Q86XR7 235 aa14.27□□□□□ -0.13
CSTF3-205ENST00000524775 CELF1Q92879 486 aaKnown RBP14.27□□□□□ -0.13
CSTF3-205ENST00000524775 NLRP3Q96P20 1036 aa14.27□□□□□ -0.13
CSTF3-205ENST00000524775 CDC5LQ99459 802 aaKnown RBP14.27□□□□□ -0.13
CSTF3-205ENST00000524775 BSDC1Q9NW68 430 aaPredicted RBP14.27□□□□□ -0.13
CSTF3-205ENST00000524775 SNAP23O00161 211 aa14.26□□□□□ -0.13
CSTF3-205ENST00000524775 SERPINB2P05120 415 aa14.26□□□□□ -0.13
CSTF3-205ENST00000524775 GTF2E1P29083 439 aaPredicted RBP14.26□□□□□ -0.13
CSTF3-205ENST00000524775 CHRNDQ07001 517 aa14.26□□□□□ -0.13
CSTF3-205ENST00000524775 NMIQ13287 307 aaPredicted RBP14.26□□□□□ -0.13
CSTF3-205ENST00000524775 PUM3Q15397 648 aaKnown RBP14.26□□□□□ -0.13
CSTF3-205ENST00000524775 FAM227BQ96M60 508 aa14.26□□□□□ -0.13
CSTF3-205ENST00000524775 MPHOSPH8Q99549 860 aa14.26□□□□□ -0.13
CSTF3-205ENST00000524775 MED23Q9ULK4 1368 aa14.25□□□□□ -0.13
CSTF3-205ENST00000524775 LRRC37AA6NMS7 1700 aa14.25□□□□□ -0.13
CSTF3-205ENST00000524775 KLRG2A4D1S0 409 aaPredicted RBP14.25□□□□□ -0.13
CSTF3-205ENST00000524775 HIP1O00291 1037 aa14.25□□□□□ -0.13
CSTF3-205ENST00000524775 TAF5LO75529 589 aa14.25□□□□□ -0.13
CSTF3-205ENST00000524775 IFIT1P09914 478 aaKnown RBP14.25□□□□□ -0.13
CSTF3-205ENST00000524775 ARID4AP29374 1257 aaPredicted RBP14.25□□□□□ -0.13
CSTF3-205ENST00000524775 SLC4A3P48751 1232 aa14.25□□□□□ -0.13
CSTF3-205ENST00000524775 RPS8P62241 208 aaKnown RBP14.25□□□□□ -0.13
CSTF3-205ENST00000524775 EZH2Q15910 746 aaKnown RBP14.25□□□□□ -0.13
CSTF3-205ENST00000524775 CWC27Q6UX04 472 aaKnown RBP14.25□□□□□ -0.13
CSTF3-205ENST00000524775 ANKRD18AQ8IVF6 992 aa14.25□□□□□ -0.13
CSTF3-205ENST00000524775 KBTBD3Q8NAB2 608 aa14.25□□□□□ -0.13
CSTF3-205ENST00000524775 LPIN2Q92539 896 aa14.25□□□□□ -0.13
CSTF3-205ENST00000524775 SNX21Q969T3 373 aa14.25□□□□□ -0.13
CSTF3-205ENST00000524775 TBC1D2Q9BYX2 928 aa14.25□□□□□ -0.13
CSTF3-205ENST00000524775 PAG1Q9NWQ8 432 aa14.25□□□□□ -0.13
CSTF3-205ENST00000524775 TFCP2L1Q9NZI6 479 aa14.25□□□□□ -0.13
CSTF3-205ENST00000524775 MINPP1Q9UNW1 487 aa14.25□□□□□ -0.13
CSTF3-205ENST00000524775 COL11A2P13942 1736 aaPredicted RBP14.24□□□□□ -0.13
CSTF3-205ENST00000524775 A0A0D9SFI3 127 aa14.24□□□□□ -0.13
CSTF3-205ENST00000524775 WTIPA6NIX2 430 aaPredicted RBP14.24□□□□□ -0.13
CSTF3-205ENST00000524775 CHGBP05060 677 aa14.24□□□□□ -0.13
CSTF3-205ENST00000524775 PHKA1P46020 1223 aa14.24□□□□□ -0.13
CSTF3-205ENST00000524775 PTH1RQ03431 593 aa14.24□□□□□ -0.13
CSTF3-205ENST00000524775 EN1Q05925 392 aaPredicted RBP14.24□□□□□ -0.13
CSTF3-205ENST00000524775 CRY2Q49AN0 593 aa14.24□□□□□ -0.13
CSTF3-205ENST00000524775 CCDC158Q5M9N0 1113 aa14.24□□□□□ -0.13
CSTF3-205ENST00000524775 DDX46Q7L014 1031 aaKnown RBP14.24□□□□□ -0.13
CSTF3-205ENST00000524775 CNBD1Q8NA66 436 aa14.24□□□□□ -0.13
CSTF3-205ENST00000524775 FLAD1Q8NFF5 587 aa14.24□□□□□ -0.13
CSTF3-205ENST00000524775 KCNB2Q92953 911 aa14.24□□□□□ -0.13
CSTF3-205ENST00000524775 DNAJC2Q99543 621 aaKnown RBP14.24□□□□□ -0.13
CSTF3-205ENST00000524775 FSD1Q9BTV5 496 aa14.24□□□□□ -0.13
CSTF3-205ENST00000524775 ANTXR1Q9H6X2 564 aa14.24□□□□□ -0.13
CSTF3-205ENST00000524775 ANO8Q9HCE9 1232 aaPredicted RBP14.24□□□□□ -0.13
CSTF3-205ENST00000524775 DIAPH3Q9NSV4 1193 aa14.24□□□□□ -0.13
CSTF3-205ENST00000524775 PALD1Q9ULE6 856 aa14.24□□□□□ -0.13
CSTF3-205ENST00000524775 LTBP1Q14766 1721 aa14.24□□□□□ -0.13
CSTF3-205ENST00000524775 RAD50Q92878 1312 aa14.23□□□□□ -0.13
CSTF3-205ENST00000524775 LAMA4Q16363 1823 aa14.23□□□□□ -0.13
CSTF3-205ENST00000524775 GOLIM4O00461 696 aa14.23□□□□□ -0.13
CSTF3-205ENST00000524775 HSPA4P34932 840 aa14.23□□□□□ -0.13
CSTF3-205ENST00000524775 MCAMP43121 646 aa14.23□□□□□ -0.13
CSTF3-205ENST00000524775 TTC39AQ5SRH9 613 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms