RNA–Protein interactions for RNA: ENST00000524442.1

TTC39A-213, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 3

Gene TTC39A, Length 413 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-213ENST00000524442 DICER1Q9UPY3 1922 aaKnown RBP12.7□□□□□ -0.38
TTC39A-213ENST00000524442 COL4A1P02462 1669 aa12.7□□□□□ -0.38
TTC39A-213ENST00000524442 C6orf229H3BNL8 230 aa12.69□□□□□ -0.38
TTC39A-213ENST00000524442 EIF6P56537 245 aaKnown RBP12.69□□□□□ -0.38
TTC39A-213ENST00000524442 AOC3Q16853 763 aa12.69□□□□□ -0.38
TTC39A-213ENST00000524442 TAF7LQ5H9L4 462 aa12.69□□□□□ -0.38
TTC39A-213ENST00000524442 FTSJ3Q8IY81 847 aaKnown RBP12.69□□□□□ -0.38
TTC39A-213ENST00000524442 DZIP1LQ8IYY4 767 aaKnown RBP12.69□□□□□ -0.38
TTC39A-213ENST00000524442 ANKRD44Q8N8A2 993 aa12.69□□□□□ -0.38
TTC39A-213ENST00000524442 ZNF526Q8TF50 670 aaPredicted RBP12.69□□□□□ -0.38
TTC39A-213ENST00000524442 CLUAP1Q96AJ1 413 aa12.69□□□□□ -0.38
TTC39A-213ENST00000524442 TAF1P21675 1872 aa12.69□□□□□ -0.38
TTC39A-213ENST00000524442 TIAM2Q8IVF5 1701 aa12.68□□□□□ -0.38
TTC39A-213ENST00000524442 CCDC88AQ3V6T2 1871 aa12.68□□□□□ -0.38
TTC39A-213ENST00000524442 UFL1O94874 794 aa12.68□□□□□ -0.38
TTC39A-213ENST00000524442 LDHAL6AQ6ZMR3 332 aa12.68□□□□□ -0.38
TTC39A-213ENST00000524442 ZC3H12CQ9C0D7 883 aaKnown RBP12.68□□□□□ -0.38
TTC39A-213ENST00000524442 ZNRF3Q9ULT6 936 aa12.68□□□□□ -0.38
TTC39A-213ENST00000524442 LEMD3Q9Y2U8 911 aa12.68□□□□□ -0.38
TTC39A-213ENST00000524442 DUOX1Q9NRD9 1551 aa12.68□□□□□ -0.38
TTC39A-213ENST00000524442 VEGFAP15692 232 aaPredicted RBP12.67□□□□□ -0.38
TTC39A-213ENST00000524442 GPC2Q8N158 579 aa12.67□□□□□ -0.38
TTC39A-213ENST00000524442 TMEM57Q8N5G2 664 aa12.67□□□□□ -0.38
TTC39A-213ENST00000524442 L3MBTL3Q96JM7 780 aaPredicted RBP12.67□□□□□ -0.38
TTC39A-213ENST00000524442 MEIS3Q99687 375 aa12.67□□□□□ -0.38
TTC39A-213ENST00000524442 LTBP1Q14766 1721 aa12.66□□□□□ -0.38
TTC39A-213ENST00000524442 CHRNDQ07001 517 aa12.66□□□□□ -0.38
TTC39A-213ENST00000524442 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.66□□□□□ -0.38
TTC39A-213ENST00000524442 YTHDC1Q96MU7 727 aaKnown RBP12.66□□□□□ -0.38
TTC39A-213ENST00000524442 NMRK2Q9NPI5 230 aa12.66□□□□□ -0.38
TTC39A-213ENST00000524442 CNNM1Q9NRU3 951 aa12.66□□□□□ -0.38
TTC39A-213ENST00000524442 FBXO3Q9UK99 471 aa12.66□□□□□ -0.38
TTC39A-213ENST00000524442 TNNQ9UQP3 1299 aa12.66□□□□□ -0.38
TTC39A-213ENST00000524442 LRRFIP2Q9Y608 721 aaKnown RBP12.66□□□□□ -0.38
TTC39A-213ENST00000524442 MED23Q9ULK4 1368 aa12.66□□□□□ -0.38
TTC39A-213ENST00000524442 MROH5Q6ZUA9 1318 aa12.65□□□□□ -0.38
TTC39A-213ENST00000524442 ZNF541Q9H0D2 1346 aa12.65□□□□□ -0.38
TTC39A-213ENST00000524442 COL4A5P29400 1685 aa12.65□□□□□ -0.38
TTC39A-213ENST00000524442 IQCA1LA6NCM1 817 aa12.65□□□□□ -0.38
TTC39A-213ENST00000524442 KIF3CO14782 793 aa12.65□□□□□ -0.38
TTC39A-213ENST00000524442 RIMBP2O15034 1052 aa12.65□□□□□ -0.38
TTC39A-213ENST00000524442 DDNO94850 711 aaPredicted RBP12.65□□□□□ -0.38
TTC39A-213ENST00000524442 GNAI2P04899 355 aa12.65□□□□□ -0.38
TTC39A-213ENST00000524442 TNIP1Q15025 636 aa12.65□□□□□ -0.38
TTC39A-213ENST00000524442 ZNF594Q96JF6 807 aaPredicted RBP12.65□□□□□ -0.38
TTC39A-213ENST00000524442 RRAGCQ9HB90 399 aa12.65□□□□□ -0.38
TTC39A-213ENST00000524442 ZNF804BA4D1E1 1349 aa12.64□□□□□ -0.39
TTC39A-213ENST00000524442 G3V3G9 751 aa12.64□□□□□ -0.39
TTC39A-213ENST00000524442 KCNJ4P48050 445 aa12.64□□□□□ -0.39
TTC39A-213ENST00000524442 CXCL9Q07325 125 aa12.64□□□□□ -0.39
TTC39A-213ENST00000524442 MTX1Q13505 466 aa12.64□□□□□ -0.39
TTC39A-213ENST00000524442 DCAF8Q5TAQ9 597 aa12.64□□□□□ -0.39
TTC39A-213ENST00000524442 CIAPIN1Q6FI81 312 aa12.64□□□□□ -0.39
TTC39A-213ENST00000524442 ITPRIPQ8IWB1 547 aa12.64□□□□□ -0.39
TTC39A-213ENST00000524442 C16orf71Q8IYS4 520 aaPredicted RBP12.64□□□□□ -0.39
TTC39A-213ENST00000524442 RIPOR2Q9Y4F9 1068 aa12.64□□□□□ -0.39
TTC39A-213ENST00000524442 WDR90Q96KV7 1748 aa12.64□□□□□ -0.39
TTC39A-213ENST00000524442 POTECB2RU33 542 aa12.63□□□□□ -0.39
TTC39A-213ENST00000524442 ECE2O60344 883 aa12.63□□□□□ -0.39
TTC39A-213ENST00000524442 TOMM70O94826 608 aa12.63□□□□□ -0.39
TTC39A-213ENST00000524442 RLBP1P12271 317 aa12.63□□□□□ -0.39
TTC39A-213ENST00000524442 RFX5P48382 616 aaPredicted RBP12.63□□□□□ -0.39
TTC39A-213ENST00000524442 C15orf52Q6ZUT6 534 aaKnown RBP12.63□□□□□ -0.39
TTC39A-213ENST00000524442 PODNQ7Z5L7 613 aa12.63□□□□□ -0.39
TTC39A-213ENST00000524442 CHMP4BQ9H444 224 aaKnown RBP12.63□□□□□ -0.39
TTC39A-213ENST00000524442 DBNDD1Q9H9R9 158 aa12.63□□□□□ -0.39
TTC39A-213ENST00000524442 YDJCA8MPS7 323 aa12.62□□□□□ -0.39
TTC39A-213ENST00000524442 EYA2O00167 538 aa12.62□□□□□ -0.39
TTC39A-213ENST00000524442 ZBTB7BO15156 539 aaPredicted RBP12.62□□□□□ -0.39
TTC39A-213ENST00000524442 CIAO1O76071 339 aa12.62□□□□□ -0.39
TTC39A-213ENST00000524442 PTPN12Q05209 780 aaKnown RBP12.62□□□□□ -0.39
TTC39A-213ENST00000524442 UBE4AQ14139 1066 aa12.62□□□□□ -0.39
TTC39A-213ENST00000524442 PDE3AQ14432 1141 aa12.62□□□□□ -0.39
TTC39A-213ENST00000524442 DOK7Q18PE1 504 aa12.62□□□□□ -0.39
TTC39A-213ENST00000524442 GPR101Q96P66 508 aaPredicted RBP12.62□□□□□ -0.39
TTC39A-213ENST00000524442 COA1Q9GZY4 146 aa12.62□□□□□ -0.39
TTC39A-213ENST00000524442 HACL1Q9UJ83 578 aa12.62□□□□□ -0.39
TTC39A-213ENST00000524442 GJA3Q9Y6H8 435 aa12.62□□□□□ -0.39
TTC39A-213ENST00000524442 TAF5LO75529 589 aa12.61□□□□□ -0.39
TTC39A-213ENST00000524442 RAD17O75943 681 aa12.61□□□□□ -0.39
TTC39A-213ENST00000524442 LMOD1P29536 600 aaPredicted RBP12.61□□□□□ -0.39
TTC39A-213ENST00000524442 HELBQ8NG08 1087 aaPredicted RBP12.61□□□□□ -0.39
TTC39A-213ENST00000524442 RBM46Q8TBY0 533 aaKnown RBP12.61□□□□□ -0.39
TTC39A-213ENST00000524442 PANK1Q8TE04 598 aa12.61□□□□□ -0.39
TTC39A-213ENST00000524442 PUS3Q9BZE2 481 aaKnown RBP12.61□□□□□ -0.39
TTC39A-213ENST00000524442 COPRSQ9NQ92 184 aa12.61□□□□□ -0.39
TTC39A-213ENST00000524442 DDX19BQ9UMR2 479 aa12.61□□□□□ -0.39
TTC39A-213ENST00000524442 SPEF2Q9C093 1822 aa12.6□□□□□ -0.39
TTC39A-213ENST00000524442 WTIPA6NIX2 430 aaPredicted RBP12.6□□□□□ -0.39
TTC39A-213ENST00000524442 SRGAP3O43295 1099 aa12.6□□□□□ -0.39
TTC39A-213ENST00000524442 PLIN1O60240 522 aa12.6□□□□□ -0.39
TTC39A-213ENST00000524442 PDE8BO95263 885 aa12.6□□□□□ -0.39
TTC39A-213ENST00000524442 RPS12P25398 132 aaKnown RBP12.6□□□□□ -0.39
TTC39A-213ENST00000524442 C1QTNF8P60827 252 aa12.6□□□□□ -0.39
TTC39A-213ENST00000524442 MVPQ14764 893 aaKnown RBP12.6□□□□□ -0.39
TTC39A-213ENST00000524442 LRRC24Q50LG9 513 aa12.6□□□□□ -0.39
TTC39A-213ENST00000524442 METTL24Q5JXM2 366 aa12.6□□□□□ -0.39
TTC39A-213ENST00000524442 PNMA8AQ86V59 439 aaPredicted RBP12.6□□□□□ -0.39
TTC39A-213ENST00000524442 KLHDC4Q8TBB5 520 aa12.6□□□□□ -0.39
TTC39A-213ENST00000524442 DPF2Q92785 391 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms