RNA–Protein interactions for RNA: ENST00000524334.1

HDAC2-217, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-217ENST00000524334 FAM161AQ3B820 660 aa16.17■□□□□ 0.18
HDAC2-217ENST00000524334 PNMA8AQ86V59 439 aaPredicted RBP16.17■□□□□ 0.18
HDAC2-217ENST00000524334 ANKRD2Q9GZV1 360 aa16.17■□□□□ 0.18
HDAC2-217ENST00000524334 ZBED9Q6R2W3 1325 aa16.17■□□□□ 0.18
HDAC2-217ENST00000524334 KIF16BQ96L93 1317 aa16.17■□□□□ 0.18
HDAC2-217ENST00000524334 G3V3G9 751 aa16.16■□□□□ 0.18
HDAC2-217ENST00000524334 RIMBP2O15034 1052 aa16.16■□□□□ 0.18
HDAC2-217ENST00000524334 NBPF7P0C2Y1 421 aaPredicted RBP16.16■□□□□ 0.18
HDAC2-217ENST00000524334 LMOD1P29536 600 aaPredicted RBP16.16■□□□□ 0.18
HDAC2-217ENST00000524334 DCAF8Q5TAQ9 597 aa16.16■□□□□ 0.18
HDAC2-217ENST00000524334 CIAPIN1Q6FI81 312 aa16.16■□□□□ 0.18
HDAC2-217ENST00000524334 TAF1DQ9H5J8 278 aaPredicted RBP16.16■□□□□ 0.18
HDAC2-217ENST00000524334 CHMP3Q9Y3E7 222 aa16.16■□□□□ 0.18
HDAC2-217ENST00000524334 EPHA10Q5JZY3 1008 aa16.15■□□□□ 0.18
HDAC2-217ENST00000524334 USP44Q9H0E7 712 aa16.15■□□□□ 0.18
HDAC2-217ENST00000524334 HDAC5Q9UQL6 1122 aa16.15■□□□□ 0.18
HDAC2-217ENST00000524334 LEMD3Q9Y2U8 911 aa16.15■□□□□ 0.18
HDAC2-217ENST00000524334 LAMB2P55268 1798 aa16.15■□□□□ 0.18
HDAC2-217ENST00000524334 CACNA1SQ13698 1873 aa16.14■□□□□ 0.17
HDAC2-217ENST00000524334 TIAM2Q8IVF5 1701 aa16.14■□□□□ 0.17
HDAC2-217ENST00000524334 RAD17O75943 681 aa16.14■□□□□ 0.17
HDAC2-217ENST00000524334 EPHX2P34913 555 aa16.14■□□□□ 0.17
HDAC2-217ENST00000524334 TAF7LQ5H9L4 462 aa16.14■□□□□ 0.17
HDAC2-217ENST00000524334 SUCLG2Q96I99 432 aa16.14■□□□□ 0.17
HDAC2-217ENST00000524334 CACNA1FO60840 1977 aa16.13■□□□□ 0.17
HDAC2-217ENST00000524334 DOK7Q18PE1 504 aa16.13■□□□□ 0.17
HDAC2-217ENST00000524334 CHADLQ6NUI6 762 aa16.13■□□□□ 0.17
HDAC2-217ENST00000524334 LDHAL6AQ6ZMR3 332 aa16.13■□□□□ 0.17
HDAC2-217ENST00000524334 LDHDQ86WU2 507 aa16.13■□□□□ 0.17
HDAC2-217ENST00000524334 KAZALD1Q96I82 304 aa16.13■□□□□ 0.17
HDAC2-217ENST00000524334 DBNDD1Q9H9R9 158 aa16.13■□□□□ 0.17
HDAC2-217ENST00000524334 COL4A5P29400 1685 aa16.13■□□□□ 0.17
HDAC2-217ENST00000524334 WDR90Q96KV7 1748 aa16.13■□□□□ 0.17
HDAC2-217ENST00000524334 YDJCA8MPS7 323 aa16.12■□□□□ 0.17
HDAC2-217ENST00000524334 ECE2O60344 883 aa16.12■□□□□ 0.17
HDAC2-217ENST00000524334 SCNN1DP51172 638 aa16.12■□□□□ 0.17
HDAC2-217ENST00000524334 APLP1P51693 650 aa16.12■□□□□ 0.17
HDAC2-217ENST00000524334 PODNQ7Z5L7 613 aa16.12■□□□□ 0.17
HDAC2-217ENST00000524334 GPRC5DQ9NZD1 345 aa16.12■□□□□ 0.17
HDAC2-217ENST00000524334 CHRNDQ07001 517 aa16.11■□□□□ 0.17
HDAC2-217ENST00000524334 RABL6Q3YEC7 729 aaPredicted RBP16.11■□□□□ 0.17
HDAC2-217ENST00000524334 EAPPQ56P03 285 aaPredicted RBP16.11■□□□□ 0.17
HDAC2-217ENST00000524334 USP50Q70EL3 339 aaPredicted RBP16.11■□□□□ 0.17
HDAC2-217ENST00000524334 DPF2Q92785 391 aa16.11■□□□□ 0.17
HDAC2-217ENST00000524334 GPR101Q96P66 508 aaPredicted RBP16.11■□□□□ 0.17
HDAC2-217ENST00000524334 BICC1Q9H694 974 aaKnown RBP16.11■□□□□ 0.17
HDAC2-217ENST00000524334 CLEC11AQ9Y240 323 aa16.11■□□□□ 0.17
HDAC2-217ENST00000524334 LRRC37AA6NMS7 1700 aa16.11■□□□□ 0.17
HDAC2-217ENST00000524334 DUOX1Q9NRD9 1551 aa16.1■□□□□ 0.17
HDAC2-217ENST00000524334 DICER1Q9UPY3 1922 aaKnown RBP16.1■□□□□ 0.17
HDAC2-217ENST00000524334 BCAR3O75815 825 aa16.1■□□□□ 0.17
HDAC2-217ENST00000524334 RPS12P25398 132 aaKnown RBP16.1■□□□□ 0.17
HDAC2-217ENST00000524334 EPS15P42566 896 aa16.1■□□□□ 0.17
HDAC2-217ENST00000524334 KCNJ4P48050 445 aa16.1■□□□□ 0.17
HDAC2-217ENST00000524334 GMPSP49915 693 aaPredicted RBP16.1■□□□□ 0.17
HDAC2-217ENST00000524334 INTS3Q68E01 1043 aaKnown RBP16.1■□□□□ 0.17
HDAC2-217ENST00000524334 ATF7IPQ6VMQ6 1270 aa16.1■□□□□ 0.17
HDAC2-217ENST00000524334 FRAT1Q92837 279 aaPredicted RBP16.1■□□□□ 0.17
HDAC2-217ENST00000524334 CNNM1Q9NRU3 951 aa16.1■□□□□ 0.17
HDAC2-217ENST00000524334 ADARB2Q9NS39 739 aaKnown RBP16.1■□□□□ 0.17
HDAC2-217ENST00000524334 COL4A1P02462 1669 aa16.1■□□□□ 0.17
HDAC2-217ENST00000524334 ZNF804BA4D1E1 1349 aa16.1■□□□□ 0.17
HDAC2-217ENST00000524334 MED23Q9ULK4 1368 aa16.1■□□□□ 0.17
HDAC2-217ENST00000524334 UBTFL1P0CB47 393 aaPredicted RBP16.09■□□□□ 0.17
HDAC2-217ENST00000524334 WTIPA6NIX2 430 aaPredicted RBP16.08■□□□□ 0.16
HDAC2-217ENST00000524334 H7C1D1 291 aa16.08■□□□□ 0.16
HDAC2-217ENST00000524334 PSMD14O00487 310 aa16.08■□□□□ 0.16
HDAC2-217ENST00000524334 VIL1P09327 827 aaKnown RBP16.08■□□□□ 0.16
HDAC2-217ENST00000524334 POTEIP0CG38 1075 aa16.08■□□□□ 0.16
HDAC2-217ENST00000524334 POTEJP0CG39 1038 aa16.08■□□□□ 0.16
HDAC2-217ENST00000524334 PIAS4Q8N2W9 510 aaPredicted RBP16.08■□□□□ 0.16
HDAC2-217ENST00000524334 ANKRD44Q8N8A2 993 aa16.08■□□□□ 0.16
HDAC2-217ENST00000524334 ZNF594Q96JF6 807 aaPredicted RBP16.08■□□□□ 0.16
HDAC2-217ENST00000524334 COA1Q9GZY4 146 aa16.08■□□□□ 0.16
HDAC2-217ENST00000524334 CNOT7Q9UIV1 285 aaKnown RBP16.08■□□□□ 0.16
HDAC2-217ENST00000524334 GNAI3P08754 354 aa16.07■□□□□ 0.16
HDAC2-217ENST00000524334 TRIM27P14373 513 aa16.07■□□□□ 0.16
HDAC2-217ENST00000524334 ZKSCAN2Q63HK3 967 aa16.07■□□□□ 0.16
HDAC2-217ENST00000524334 C15orf52Q6ZUT6 534 aaKnown RBP16.07■□□□□ 0.16
HDAC2-217ENST00000524334 KCNQ5Q9NR82 932 aa16.07■□□□□ 0.16
HDAC2-217ENST00000524334 CCDC88AQ3V6T2 1871 aa16.07■□□□□ 0.16
HDAC2-217ENST00000524334 MROH5Q6ZUA9 1318 aa16.06■□□□□ 0.16
HDAC2-217ENST00000524334 USP17L3A6NCW0 530 aa16.06■□□□□ 0.16
HDAC2-217ENST00000524334 USP17L4A6NCW7 530 aa16.06■□□□□ 0.16
HDAC2-217ENST00000524334 TAF5LO75529 589 aa16.06■□□□□ 0.16
HDAC2-217ENST00000524334 USP17L1Q7RTZ2 530 aa16.06■□□□□ 0.16
HDAC2-217ENST00000524334 HELBQ8NG08 1087 aaPredicted RBP16.06■□□□□ 0.16
HDAC2-217ENST00000524334 ZBTB12Q9Y330 459 aaPredicted RBP16.06■□□□□ 0.16
HDAC2-217ENST00000524334 RIPOR2Q9Y4F9 1068 aa16.06■□□□□ 0.16
HDAC2-217ENST00000524334 PLIN1O60240 522 aa16.05■□□□□ 0.16
HDAC2-217ENST00000524334 RSBN1LQ6PCB5 846 aaPredicted RBP16.05■□□□□ 0.16
HDAC2-217ENST00000524334 CNTROBQ8N137 903 aa16.05■□□□□ 0.16
HDAC2-217ENST00000524334 AGBL3Q8NEM8 1001 aa16.05■□□□□ 0.16
HDAC2-217ENST00000524334 ZC3H15Q8WU90 426 aaKnown RBP16.05■□□□□ 0.16
HDAC2-217ENST00000524334 TAF1P21675 1872 aa16.05■□□□□ 0.16
HDAC2-217ENST00000524334 ITGBL1O95965 494 aaPredicted RBP16.04■□□□□ 0.16
HDAC2-217ENST00000524334 UBE4AQ14139 1066 aa16.04■□□□□ 0.16
HDAC2-217ENST00000524334 TXNRD3Q86VQ6 643 aa16.04■□□□□ 0.16
HDAC2-217ENST00000524334 MICALL2Q8IY33 904 aa16.04■□□□□ 0.16
HDAC2-217ENST00000524334 LTBP1Q14766 1721 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms