RNA–Protein interactions for RNA: ENST00000524317.1

SCUBE2-208, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 2

Gene SCUBE2, Length 2,322 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-208ENST00000524317 CIAO1O76071 339 aa14.01□□□□□ -0.17
SCUBE2-208ENST00000524317 PRPF40BQ6NWY9 871 aaKnown RBP14.01□□□□□ -0.17
SCUBE2-208ENST00000524317 KCNB2Q92953 911 aa14.01□□□□□ -0.17
SCUBE2-208ENST00000524317 GPR108Q9NPR9 543 aa14.01□□□□□ -0.17
SCUBE2-208ENST00000524317 AFDNP55196 1824 aaKnown RBP14□□□□□ -0.17
SCUBE2-208ENST00000524317 NECTIN1Q15223 517 aa14□□□□□ -0.17
SCUBE2-208ENST00000524317 SMYD5Q6GMV2 418 aa14□□□□□ -0.17
SCUBE2-208ENST00000524317 TMED8Q6PL24 325 aaPredicted RBP14□□□□□ -0.17
SCUBE2-208ENST00000524317 INTS4Q96HW7 963 aaKnown RBP14□□□□□ -0.17
SCUBE2-208ENST00000524317 TTC14Q96N46 770 aa14□□□□□ -0.17
SCUBE2-208ENST00000524317 HAUS7Q99871 368 aa14□□□□□ -0.17
SCUBE2-208ENST00000524317 PLA2G12BQ9BX93 195 aa14□□□□□ -0.17
SCUBE2-208ENST00000524317 NDUFB9Q9Y6M9 179 aa14□□□□□ -0.17
SCUBE2-208ENST00000524317 TJP1Q07157 1748 aa14□□□□□ -0.17
SCUBE2-208ENST00000524317 SPATA31A5Q5VU36 1347 aa14□□□□□ -0.17
SCUBE2-208ENST00000524317 SPATA31A7Q8IWB4 1347 aa14□□□□□ -0.17
SCUBE2-208ENST00000524317 MAP4K1Q92918 833 aa13.99□□□□□ -0.17
SCUBE2-208ENST00000524317 MED23Q9ULK4 1368 aa13.99□□□□□ -0.17
SCUBE2-208ENST00000524317 CARNS1A5YM72 827 aa13.99□□□□□ -0.17
SCUBE2-208ENST00000524317 BAG4O95429 457 aaKnown RBP13.99□□□□□ -0.17
SCUBE2-208ENST00000524317 TIMM10P62072 90 aa13.99□□□□□ -0.17
SCUBE2-208ENST00000524317 CCDC57Q2TAC2 916 aa13.99□□□□□ -0.17
SCUBE2-208ENST00000524317 HSP90AB3PQ58FF7 597 aa13.99□□□□□ -0.17
SCUBE2-208ENST00000524317 NLRP10Q86W26 655 aa13.99□□□□□ -0.17
SCUBE2-208ENST00000524317 MARCH10Q8NA82 808 aaPredicted RBP13.99□□□□□ -0.17
SCUBE2-208ENST00000524317 NEUROD6Q96NK8 337 aa13.99□□□□□ -0.17
SCUBE2-208ENST00000524317 DNAJC2Q99543 621 aaKnown RBP13.99□□□□□ -0.17
SCUBE2-208ENST00000524317 PUS3Q9BZE2 481 aaKnown RBP13.99□□□□□ -0.17
SCUBE2-208ENST00000524317 RBM8AQ9Y5S9 174 aaKnown RBP13.99□□□□□ -0.17
SCUBE2-208ENST00000524317 TOM1O60784 492 aa13.98□□□□□ -0.17
SCUBE2-208ENST00000524317 CSF1RP07333 972 aa13.98□□□□□ -0.17
SCUBE2-208ENST00000524317 GPTP24298 496 aa13.98□□□□□ -0.17
SCUBE2-208ENST00000524317 ZNF589Q86UQ0 364 aaPredicted RBP13.98□□□□□ -0.17
SCUBE2-208ENST00000524317 ZDHHC9Q9Y397 364 aa13.98□□□□□ -0.17
SCUBE2-208ENST00000524317 IL6STP40189 918 aaPredicted RBP13.98□□□□□ -0.17
SCUBE2-208ENST00000524317 MLLT3P42568 568 aaPredicted RBP13.98□□□□□ -0.17
SCUBE2-208ENST00000524317 ADCK5Q3MIX3 580 aa13.98□□□□□ -0.17
SCUBE2-208ENST00000524317 SYNE4Q8N205 404 aa13.98□□□□□ -0.17
SCUBE2-208ENST00000524317 ACSBG1Q96GR2 724 aa13.98□□□□□ -0.17
SCUBE2-208ENST00000524317 RFX7Q2KHR2 1363 aa13.97□□□□□ -0.17
SCUBE2-208ENST00000524317 CASTP20810 708 aaKnown RBP13.97□□□□□ -0.17
SCUBE2-208ENST00000524317 PTMSP20962 102 aa13.97□□□□□ -0.17
SCUBE2-208ENST00000524317 CREB3L3Q68CJ9 461 aa13.97□□□□□ -0.17
SCUBE2-208ENST00000524317 CCDC85AQ96PX6 553 aaPredicted RBP13.97□□□□□ -0.17
SCUBE2-208ENST00000524317 CDHR2Q9BYE9 1310 aa13.97□□□□□ -0.17
SCUBE2-208ENST00000524317 ERVV-1B6SEH8 477 aa13.97□□□□□ -0.17
SCUBE2-208ENST00000524317 AK2P54819 239 aa13.97□□□□□ -0.17
SCUBE2-208ENST00000524317 JAKMIP1Q96N16 626 aaKnown RBP13.97□□□□□ -0.17
SCUBE2-208ENST00000524317 TM6SF1Q9BZW5 370 aa13.97□□□□□ -0.17
SCUBE2-208ENST00000524317 SLIT2O94813 1529 aa13.97□□□□□ -0.17
SCUBE2-208ENST00000524317 ZNF609O15014 1411 aa13.96□□□□□ -0.17
SCUBE2-208ENST00000524317 PHLPP1O60346 1717 aa13.96□□□□□ -0.17
SCUBE2-208ENST00000524317 A0A0G2JS52 829 aa13.96□□□□□ -0.17
SCUBE2-208ENST00000524317 A0A1B0GUL7 405 aa13.96□□□□□ -0.17
SCUBE2-208ENST00000524317 DCAF8L1A6NGE4 600 aa13.96□□□□□ -0.17
SCUBE2-208ENST00000524317 CPA1P15085 419 aa13.96□□□□□ -0.17
SCUBE2-208ENST00000524317 ZKSCAN1P17029 563 aaPredicted RBP13.96□□□□□ -0.17
SCUBE2-208ENST00000524317 KCNJ4P48050 445 aa13.96□□□□□ -0.17
SCUBE2-208ENST00000524317 DDX46Q7L014 1031 aaKnown RBP13.96□□□□□ -0.17
SCUBE2-208ENST00000524317 RUFY3Q7L099 469 aa13.96□□□□□ -0.17
SCUBE2-208ENST00000524317 DZIP3Q86Y13 1208 aaKnown RBP13.96□□□□□ -0.17
SCUBE2-208ENST00000524317 ZSWIM6Q9HCJ5 1215 aa13.96□□□□□ -0.17
SCUBE2-208ENST00000524317 TBC1D2BQ9UPU7 963 aa13.96□□□□□ -0.17
SCUBE2-208ENST00000524317 JCADQ9P266 1359 aa13.96□□□□□ -0.17
SCUBE2-208ENST00000524317 GOLGA6L3A6NEY3 463 aa13.96□□□□□ -0.18
SCUBE2-208ENST00000524317 GOLGA6L22H0YM25 854 aa13.96□□□□□ -0.18
SCUBE2-208ENST00000524317 TAF5LO75529 589 aa13.96□□□□□ -0.18
SCUBE2-208ENST00000524317 CHGBP05060 677 aa13.96□□□□□ -0.18
SCUBE2-208ENST00000524317 XRCC6P12956 609 aaKnown RBP eCLIP13.96□□□□□ -0.18
SCUBE2-208ENST00000524317 IFIT5Q13325 482 aaKnown RBP13.96□□□□□ -0.18
SCUBE2-208ENST00000524317 CEP126Q9P2H0 1117 aa13.96□□□□□ -0.18
SCUBE2-208ENST00000524317 SLC27A2O14975 620 aa13.95□□□□□ -0.18
SCUBE2-208ENST00000524317 KDM4AO75164 1064 aa13.95□□□□□ -0.18
SCUBE2-208ENST00000524317 INTS5Q6P9B9 1019 aaKnown RBP13.95□□□□□ -0.18
SCUBE2-208ENST00000524317 KBTBD3Q8NAB2 608 aa13.95□□□□□ -0.18
SCUBE2-208ENST00000524317 NRAPQ86VF7 1730 aa13.95□□□□□ -0.18
SCUBE2-208ENST00000524317 ITGB4P16144 1822 aa13.95□□□□□ -0.18
SCUBE2-208ENST00000524317 NUBP1P53384 320 aa13.95□□□□□ -0.18
SCUBE2-208ENST00000524317 EIF5P55010 431 aaKnown RBP13.95□□□□□ -0.18
SCUBE2-208ENST00000524317 SKOR2Q2VWA4 1001 aaPredicted RBP13.95□□□□□ -0.18
SCUBE2-208ENST00000524317 VPS53Q5VIR6 699 aa13.95□□□□□ -0.18
SCUBE2-208ENST00000524317 TTLL11Q8NHH1 800 aa13.95□□□□□ -0.18
SCUBE2-208ENST00000524317 LIMCH1Q9UPQ0 1083 aa13.95□□□□□ -0.18
SCUBE2-208ENST00000524317 CYP46A1Q9Y6A2 500 aa13.95□□□□□ -0.18
SCUBE2-208ENST00000524317 LOC102724428A0A0B4J2F2 783 aa13.94□□□□□ -0.18
SCUBE2-208ENST00000524317 GOLIM4O00461 696 aa13.94□□□□□ -0.18
SCUBE2-208ENST00000524317 BRD1O95696 1058 aa13.94□□□□□ -0.18
SCUBE2-208ENST00000524317 ATP6V1AP38606 617 aa13.94□□□□□ -0.18
SCUBE2-208ENST00000524317 CTSWP56202 376 aa13.94□□□□□ -0.18
SCUBE2-208ENST00000524317 SIK1P57059 783 aa13.94□□□□□ -0.18
SCUBE2-208ENST00000524317 LARP6Q9BRS8 491 aaKnown RBP13.94□□□□□ -0.18
SCUBE2-208ENST00000524317 PDRG1Q9NUG6 133 aa13.94□□□□□ -0.18
SCUBE2-208ENST00000524317 PAG1Q9NWQ8 432 aa13.94□□□□□ -0.18
SCUBE2-208ENST00000524317 TRMT112Q9UI30 125 aaKnown RBP13.94□□□□□ -0.18
SCUBE2-208ENST00000524317 UBN2Q6ZU65 1347 aa13.94□□□□□ -0.18
SCUBE2-208ENST00000524317 IRS4O14654 1257 aaPredicted RBP13.93□□□□□ -0.18
SCUBE2-208ENST00000524317 RNF20Q5VTR2 975 aa13.93□□□□□ -0.18
SCUBE2-208ENST00000524317 MCTP1Q6DN14 999 aa13.93□□□□□ -0.18
SCUBE2-208ENST00000524317 ZNF34Q8IZ26 560 aa13.93□□□□□ -0.18
SCUBE2-208ENST00000524317 MAP7D2Q96T17 732 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms