RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 DTWD1Q8N5C7 304 aa9.87□□□□□ -0.83
SKP1-213ENST00000524288 LPIN3Q9BQK8 851 aa9.87□□□□□ -0.83
SKP1-213ENST00000524288 SAP130Q9H0E3 1048 aa9.87□□□□□ -0.83
SKP1-213ENST00000524288 KCNMB2Q9Y691 235 aa9.87□□□□□ -0.83
SKP1-213ENST00000524288 ZBTB42B2RXF5 422 aa9.86□□□□□ -0.83
SKP1-213ENST00000524288 ELMSAN1Q6PJG2 1045 aa9.86□□□□□ -0.83
SKP1-213ENST00000524288 GLYCTKQ8IVS8 523 aa9.86□□□□□ -0.83
SKP1-213ENST00000524288 TNFRSF10BO14763 440 aa9.85□□□□□ -0.83
SKP1-213ENST00000524288 PSAPP07602 524 aa9.85□□□□□ -0.83
SKP1-213ENST00000524288 NRG1Q02297 640 aaPredicted RBP9.85□□□□□ -0.83
SKP1-213ENST00000524288 PLAURQ03405 335 aa9.85□□□□□ -0.83
SKP1-213ENST00000524288 GRIK4Q16099 956 aa9.85□□□□□ -0.83
SKP1-213ENST00000524288 PERM1Q5SV97 790 aa9.85□□□□□ -0.83
SKP1-213ENST00000524288 MSL1Q68DK7 614 aa9.85□□□□□ -0.83
SKP1-213ENST00000524288 ICMTO60725 284 aa9.84□□□□□ -0.83
SKP1-213ENST00000524288 NOM1Q5C9Z4 860 aaKnown RBP9.84□□□□□ -0.83
SKP1-213ENST00000524288 FMR1NBQ8N0W7 255 aaPredicted RBP9.84□□□□□ -0.83
SKP1-213ENST00000524288 PIK3R5Q8WYR1 880 aa9.84□□□□□ -0.83
SKP1-213ENST00000524288 LENG1Q96BZ8 264 aaPredicted RBP9.84□□□□□ -0.83
SKP1-213ENST00000524288 USP20Q9Y2K6 914 aa9.84□□□□□ -0.83
SKP1-213ENST00000524288 DOC2BQ14184 412 aa9.83□□□□□ -0.84
SKP1-213ENST00000524288 GRIK5Q16478 980 aa9.83□□□□□ -0.84
SKP1-213ENST00000524288 DNAJC14Q6Y2X3 702 aaPredicted RBP9.83□□□□□ -0.84
SKP1-213ENST00000524288 NLRP13Q86W25 1043 aa9.83□□□□□ -0.84
SKP1-213ENST00000524288 ABTB2Q8N961 1025 aa9.83□□□□□ -0.84
SKP1-213ENST00000524288 STIM2Q9P246 746 aa9.83□□□□□ -0.84
SKP1-213ENST00000524288 EGFL7Q9UHF1 273 aa9.83□□□□□ -0.84
SKP1-213ENST00000524288 MLLT1Q03111 559 aaPredicted RBP9.82□□□□□ -0.84
SKP1-213ENST00000524288 ADGRE1Q14246 886 aa9.82□□□□□ -0.84
SKP1-213ENST00000524288 DMRTC2Q8IXT2 367 aaPredicted RBP9.82□□□□□ -0.84
SKP1-213ENST00000524288 FNDC3AQ9Y2H6 1198 aaKnown RBP9.82□□□□□ -0.84
SKP1-213ENST00000524288 MMP20O60882 483 aa9.81□□□□□ -0.84
SKP1-213ENST00000524288 SELPP16109 830 aa9.81□□□□□ -0.84
SKP1-213ENST00000524288 EIF2AK2P19525 551 aaKnown RBP9.81□□□□□ -0.84
SKP1-213ENST00000524288 WFDC8Q8IUA0 241 aa9.81□□□□□ -0.84
SKP1-213ENST00000524288 RBSNQ9H1K0 784 aa9.81□□□□□ -0.84
SKP1-213ENST00000524288 LOC102724428A0A0B4J2F2 783 aa9.8□□□□□ -0.84
SKP1-213ENST00000524288 MAPK1P28482 360 aa9.8□□□□□ -0.84
SKP1-213ENST00000524288 ZAP70P43403 619 aa9.8□□□□□ -0.84
SKP1-213ENST00000524288 SIK1P57059 783 aa9.8□□□□□ -0.84
SKP1-213ENST00000524288 MBTPS1Q14703 1052 aa9.8□□□□□ -0.84
SKP1-213ENST00000524288 TRIP4Q15650 581 aaPredicted RBP9.8□□□□□ -0.84
SKP1-213ENST00000524288 FBXO11Q86XK2 927 aa9.8□□□□□ -0.84
SKP1-213ENST00000524288 SMG9Q9H0W8 520 aaKnown RBP9.8□□□□□ -0.84
SKP1-213ENST00000524288 UBAP1LF5GYI3 381 aa9.79□□□□□ -0.84
SKP1-213ENST00000524288 GHRHP01286 108 aa9.79□□□□□ -0.84
SKP1-213ENST00000524288 FKBP4Q02790 459 aaKnown RBP eCLIP9.79□□□□□ -0.84
SKP1-213ENST00000524288 FAM26DQ5JW98 314 aa9.79□□□□□ -0.84
SKP1-213ENST00000524288 TPSG1Q9NRR2 321 aa9.79□□□□□ -0.84
SKP1-213ENST00000524288 ECM1Q16610 540 aa9.78□□□□□ -0.84
SKP1-213ENST00000524288 RSPO4Q2I0M5 234 aaPredicted RBP9.78□□□□□ -0.84
SKP1-213ENST00000524288 NKAPLQ5M9Q1 402 aa9.78□□□□□ -0.84
SKP1-213ENST00000524288 HFE2Q6ZVN8 426 aa9.78□□□□□ -0.84
SKP1-213ENST00000524288 TXNRD3Q86VQ6 643 aa9.78□□□□□ -0.84
SKP1-213ENST00000524288 CACTIN-AS1Q8N1I8 211 aa9.78□□□□□ -0.84
SKP1-213ENST00000524288 HELQQ8TDG4 1101 aa9.78□□□□□ -0.84
SKP1-213ENST00000524288 PLD4Q96BZ4 506 aa9.78□□□□□ -0.84
SKP1-213ENST00000524288 SRA1Q9HD15 236 aaKnown RBP9.78□□□□□ -0.84
SKP1-213ENST00000524288 AMOTL2Q9Y2J4 779 aa9.78□□□□□ -0.84
SKP1-213ENST00000524288 ANKRD33BA6NCL7 494 aa9.77□□□□□ -0.85
SKP1-213ENST00000524288 OR13H1Q8NG92 308 aa9.77□□□□□ -0.85
SKP1-213ENST00000524288 DCAF11Q8TEB1 546 aa9.77□□□□□ -0.85
SKP1-213ENST00000524288 SEMA6BQ9H3T3 888 aa9.77□□□□□ -0.85
SKP1-213ENST00000524288 UNCXA6NJT0 531 aa9.76□□□□□ -0.85
SKP1-213ENST00000524288 RPLP1P05386 114 aaKnown RBP9.76□□□□□ -0.85
SKP1-213ENST00000524288 MPSTP25325 297 aa9.76□□□□□ -0.85
SKP1-213ENST00000524288 ARHGAP4P98171 946 aa9.76□□□□□ -0.85
SKP1-213ENST00000524288 SF3B2Q13435 895 aaKnown RBP9.76□□□□□ -0.85
SKP1-213ENST00000524288 NSUN5Q96P11 429 aaKnown RBP9.76□□□□□ -0.85
SKP1-213ENST00000524288 USP21Q9UK80 565 aa9.76□□□□□ -0.85
SKP1-213ENST00000524288 E9PSI1 815 aa9.75□□□□□ -0.85
SKP1-213ENST00000524288 SHISA2Q6UWI4 295 aa9.75□□□□□ -0.85
SKP1-213ENST00000524288 MAP4K3Q8IVH8 894 aa9.75□□□□□ -0.85
SKP1-213ENST00000524288 J3QW42 95 aa9.74□□□□□ -0.85
SKP1-213ENST00000524288 PDE12Q6L8Q7 609 aaKnown RBP9.74□□□□□ -0.85
SKP1-213ENST00000524288 IGF2-ASQ6U949 168 aa9.74□□□□□ -0.85
SKP1-213ENST00000524288 GPR152Q8TDT2 470 aa9.74□□□□□ -0.85
SKP1-213ENST00000524288 BCL2L13Q9BXK5 485 aa9.74□□□□□ -0.85
SKP1-213ENST00000524288 DYRK3O43781 588 aa9.73□□□□□ -0.85
SKP1-213ENST00000524288 H2AFB1P0C5Y9 115 aa9.73□□□□□ -0.85
SKP1-213ENST00000524288 H2AFB2P0C5Z0 115 aa9.73□□□□□ -0.85
SKP1-213ENST00000524288 HYAL2Q12891 473 aa9.73□□□□□ -0.85
SKP1-213ENST00000524288 TTC39BQ5VTQ0 682 aaPredicted RBP9.73□□□□□ -0.85
SKP1-213ENST00000524288 NPAS4Q8IUM7 802 aa9.73□□□□□ -0.85
SKP1-213ENST00000524288 MUC3BQ9H195 1237 aa9.73□□□□□ -0.85
SKP1-213ENST00000524288 DCTN4Q9UJW0 460 aa9.73□□□□□ -0.85
SKP1-213ENST00000524288 ZBTB39O15060 712 aa9.72□□□□□ -0.85
SKP1-213ENST00000524288 ITGB7P26010 798 aa9.72□□□□□ -0.85
SKP1-213ENST00000524288 GIPC2Q8TF65 315 aa9.72□□□□□ -0.85
SKP1-213ENST00000524288 SPACA7Q96KW9 195 aa9.72□□□□□ -0.85
SKP1-213ENST00000524288 ABI2Q9NYB9 513 aaPredicted RBP9.72□□□□□ -0.85
SKP1-213ENST00000524288 RBM47A0AV96 593 aaKnown RBP9.71□□□□□ -0.86
SKP1-213ENST00000524288 DLL1O00548 723 aa9.7□□□□□ -0.86
SKP1-213ENST00000524288 DEAF1O75398 565 aaPredicted RBP9.7□□□□□ -0.86
SKP1-213ENST00000524288 FAM13AO94988 1023 aa9.7□□□□□ -0.86
SKP1-213ENST00000524288 KIF4AO95239 1232 aa9.7□□□□□ -0.86
SKP1-213ENST00000524288 PCSK2P16519 638 aa9.7□□□□□ -0.86
SKP1-213ENST00000524288 ERCC3P19447 782 aa9.7□□□□□ -0.86
SKP1-213ENST00000524288 TAGLNQ01995 201 aaKnown RBP9.7□□□□□ -0.86
SKP1-213ENST00000524288 AAMPQ13685 434 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms