RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 BIN2Q9UBW5 565 aaPredicted RBP6.79□□□□□ -1.32
PCM1-220ENST00000523896 USP20Q9Y2K6 914 aa6.79□□□□□ -1.32
PCM1-220ENST00000523896 CCDC9Q9Y3X0 531 aaKnown RBP6.79□□□□□ -1.32
PCM1-220ENST00000523896 A0A0A0MRY4 1105 aa6.78□□□□□ -1.32
PCM1-220ENST00000523896 OPLAHO14841 1288 aa6.78□□□□□ -1.32
PCM1-220ENST00000523896 EGFRP00533 1210 aa6.78□□□□□ -1.32
PCM1-220ENST00000523896 AFF1P51825 1210 aaKnown RBP6.78□□□□□ -1.32
PCM1-220ENST00000523896 ARHGAP4P98171 946 aa6.78□□□□□ -1.32
PCM1-220ENST00000523896 ALKBH2Q6NS38 261 aa6.78□□□□□ -1.32
PCM1-220ENST00000523896 WFDC8Q8IUA0 241 aa6.78□□□□□ -1.32
PCM1-220ENST00000523896 TLR7Q9NYK1 1049 aaKnown RBP6.78□□□□□ -1.32
PCM1-220ENST00000523896 ZFATQ9P243 1243 aa6.78□□□□□ -1.32
PCM1-220ENST00000523896 NAGPAQ9UK23 515 aa6.78□□□□□ -1.32
PCM1-220ENST00000523896 UBAP1LF5GYI3 381 aa6.77□□□□□ -1.33
PCM1-220ENST00000523896 GRNP28799 593 aaKnown RBP6.77□□□□□ -1.33
PCM1-220ENST00000523896 EIF1AXP47813 144 aaKnown RBP6.77□□□□□ -1.33
PCM1-220ENST00000523896 MFAP1P55081 439 aaKnown RBP6.77□□□□□ -1.33
PCM1-220ENST00000523896 NRG1Q02297 640 aaPredicted RBP6.77□□□□□ -1.33
PCM1-220ENST00000523896 COL9A3Q14050 684 aaPredicted RBP6.77□□□□□ -1.33
PCM1-220ENST00000523896 DOC2BQ14184 412 aa6.77□□□□□ -1.33
PCM1-220ENST00000523896 GRIK4Q16099 956 aa6.77□□□□□ -1.33
PCM1-220ENST00000523896 NOM1Q5C9Z4 860 aaKnown RBP6.77□□□□□ -1.33
PCM1-220ENST00000523896 FAM26DQ5JW98 314 aa6.77□□□□□ -1.33
PCM1-220ENST00000523896 PERM1Q5SV97 790 aa6.77□□□□□ -1.33
PCM1-220ENST00000523896 ETFBKMTQ8IXQ9 262 aa6.77□□□□□ -1.33
PCM1-220ENST00000523896 DMRTC2Q8IXT2 367 aaPredicted RBP6.77□□□□□ -1.33
PCM1-220ENST00000523896 MSL1Q68DK7 614 aa6.76□□□□□ -1.33
PCM1-220ENST00000523896 HFE2Q6ZVN8 426 aa6.76□□□□□ -1.33
PCM1-220ENST00000523896 NLRP13Q86W25 1043 aa6.76□□□□□ -1.33
PCM1-220ENST00000523896 DTWD1Q8N5C7 304 aa6.76□□□□□ -1.33
PCM1-220ENST00000523896 TTC16Q8NEE8 873 aa6.76□□□□□ -1.33
PCM1-220ENST00000523896 LPIN3Q9BQK8 851 aa6.76□□□□□ -1.33
PCM1-220ENST00000523896 SMG9Q9H0W8 520 aaKnown RBP6.76□□□□□ -1.33
PCM1-220ENST00000523896 USP21Q9UK80 565 aa6.76□□□□□ -1.33
PCM1-220ENST00000523896 ZBTB39O15060 712 aa6.75□□□□□ -1.33
PCM1-220ENST00000523896 PCSK2P16519 638 aa6.75□□□□□ -1.33
PCM1-220ENST00000523896 SOX18P35713 384 aa6.75□□□□□ -1.33
PCM1-220ENST00000523896 ZAP70P43403 619 aa6.75□□□□□ -1.33
PCM1-220ENST00000523896 TTC39BQ5VTQ0 682 aaPredicted RBP6.75□□□□□ -1.33
PCM1-220ENST00000523896 DCAF11Q8TEB1 546 aa6.75□□□□□ -1.33
PCM1-220ENST00000523896 TTC9Q92623 222 aa6.75□□□□□ -1.33
PCM1-220ENST00000523896 SPACA7Q96KW9 195 aa6.75□□□□□ -1.33
PCM1-220ENST00000523896 NSUN5Q96P11 429 aaKnown RBP6.75□□□□□ -1.33
PCM1-220ENST00000523896 DCTN4Q9UJW0 460 aa6.75□□□□□ -1.33
PCM1-220ENST00000523896 LOC102724428A0A0B4J2F2 783 aa6.74□□□□□ -1.33
PCM1-220ENST00000523896 MMP20O60882 483 aa6.74□□□□□ -1.33
PCM1-220ENST00000523896 SIK1P57059 783 aa6.74□□□□□ -1.33
PCM1-220ENST00000523896 FMR1NBQ8N0W7 255 aaPredicted RBP6.74□□□□□ -1.33
PCM1-220ENST00000523896 GPR152Q8TDT2 470 aa6.74□□□□□ -1.33
PCM1-220ENST00000523896 PLD4Q96BZ4 506 aa6.74□□□□□ -1.33
PCM1-220ENST00000523896 KCNMB2Q9Y691 235 aa6.74□□□□□ -1.33
PCM1-220ENST00000523896 FAM177BA6PVY3 158 aa6.73□□□□□ -1.33
PCM1-220ENST00000523896 ZBTB42B2RXF5 422 aa6.73□□□□□ -1.33
PCM1-220ENST00000523896 FZD6O60353 706 aa6.73□□□□□ -1.33
PCM1-220ENST00000523896 RPLP1P05386 114 aaKnown RBP6.73□□□□□ -1.33
PCM1-220ENST00000523896 SEMA6BQ9H3T3 888 aa6.73□□□□□ -1.33
PCM1-220ENST00000523896 J3QW42 95 aa6.72□□□□□ -1.33
PCM1-220ENST00000523896 NDUFB5O43674 189 aa6.72□□□□□ -1.33
PCM1-220ENST00000523896 MZF1P28698 734 aaPredicted RBP6.72□□□□□ -1.33
PCM1-220ENST00000523896 HYAL2Q12891 473 aa6.72□□□□□ -1.33
PCM1-220ENST00000523896 GDF6Q6KF10 455 aaPredicted RBP6.72□□□□□ -1.33
PCM1-220ENST00000523896 DNAJC14Q6Y2X3 702 aaPredicted RBP6.72□□□□□ -1.33
PCM1-220ENST00000523896 TXNRD3Q86VQ6 643 aa6.72□□□□□ -1.33
PCM1-220ENST00000523896 ATCAYQ86WG3 371 aa6.72□□□□□ -1.33
PCM1-220ENST00000523896 CACTIN-AS1Q8N1I8 211 aa6.72□□□□□ -1.33
PCM1-220ENST00000523896 LENG1Q96BZ8 264 aaPredicted RBP6.72□□□□□ -1.33
PCM1-220ENST00000523896 RBCK1Q9BYM8 510 aa6.72□□□□□ -1.33
PCM1-220ENST00000523896 BRPF3Q9ULD4 1205 aa6.72□□□□□ -1.33
PCM1-220ENST00000523896 HOXD8P13378 290 aaPredicted RBP6.71□□□□□ -1.34
PCM1-220ENST00000523896 ERCC3P19447 782 aa6.71□□□□□ -1.34
PCM1-220ENST00000523896 MAPK1P28482 360 aa6.71□□□□□ -1.34
PCM1-220ENST00000523896 MBTPS1Q14703 1052 aa6.71□□□□□ -1.34
PCM1-220ENST00000523896 CITED4Q96RK1 184 aa6.71□□□□□ -1.34
PCM1-220ENST00000523896 TPSG1Q9NRR2 321 aa6.71□□□□□ -1.34
PCM1-220ENST00000523896 CCDC87Q9NVE4 849 aa6.71□□□□□ -1.34
PCM1-220ENST00000523896 SMNDC1O75940 238 aaKnown RBP eCLIP6.7□□□□□ -1.34
PCM1-220ENST00000523896 PDGFAP04085 211 aa6.7□□□□□ -1.34
PCM1-220ENST00000523896 SELPP16109 830 aa6.7□□□□□ -1.34
PCM1-220ENST00000523896 AAMPQ13685 434 aa6.7□□□□□ -1.34
PCM1-220ENST00000523896 ADGRE1Q14246 886 aa6.7□□□□□ -1.34
PCM1-220ENST00000523896 TRIP4Q15650 581 aaPredicted RBP6.7□□□□□ -1.34
PCM1-220ENST00000523896 SHISA2Q6UWI4 295 aa6.7□□□□□ -1.34
PCM1-220ENST00000523896 FBXO11Q86XK2 927 aa6.7□□□□□ -1.34
PCM1-220ENST00000523896 IL22RA1Q8N6P7 574 aa6.7□□□□□ -1.34
PCM1-220ENST00000523896 RGS22Q8NE09 1264 aa6.7□□□□□ -1.34
PCM1-220ENST00000523896 OR13H1Q8NG92 308 aa6.7□□□□□ -1.34
PCM1-220ENST00000523896 EDEM1Q92611 657 aa6.7□□□□□ -1.34
PCM1-220ENST00000523896 ASB16Q96NS5 453 aa6.7□□□□□ -1.34
PCM1-220ENST00000523896 MUC3BQ9H195 1237 aa6.7□□□□□ -1.34
PCM1-220ENST00000523896 SRA1Q9HD15 236 aaKnown RBP6.7□□□□□ -1.34
PCM1-220ENST00000523896 ABI2Q9NYB9 513 aaPredicted RBP6.7□□□□□ -1.34
PCM1-220ENST00000523896 POLIQ9UNA4 740 aa6.7□□□□□ -1.34
PCM1-220ENST00000523896 USP5P45974 858 aa6.69□□□□□ -1.34
PCM1-220ENST00000523896 DNM1Q05193 864 aaKnown RBP6.69□□□□□ -1.34
PCM1-220ENST00000523896 GRIK5Q16478 980 aa6.69□□□□□ -1.34
PCM1-220ENST00000523896 ZNF438Q7Z4V0 828 aa6.69□□□□□ -1.34
PCM1-220ENST00000523896 MAP4K3Q8IVH8 894 aa6.69□□□□□ -1.34
PCM1-220ENST00000523896 ZSCAN29Q8IWY8 852 aaPredicted RBP6.69□□□□□ -1.34
PCM1-220ENST00000523896 GJD3Q8N144 294 aa6.69□□□□□ -1.34
PCM1-220ENST00000523896 NUDT16Q96DE0 195 aaKnown RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms