RNA–Protein interactions for RNA: ENST00000523613.5

HMBOX1-210, Transcript of homeobox containing 1, humanhuman

TSL 1 (best) BASIC

Gene HMBOX1, Length 1,730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-210ENST00000523613 NRXN2Q9P2S2 1712 aa18.44■□□□□ 0.54
HMBOX1-210ENST00000523613 GLRX3O76003 335 aaKnown RBP18.43■□□□□ 0.54
HMBOX1-210ENST00000523613 TLR7Q9NYK1 1049 aaKnown RBP18.43■□□□□ 0.54
HMBOX1-210ENST00000523613 PI4K2BQ8TCG2 481 aa18.43■□□□□ 0.54
HMBOX1-210ENST00000523613 BSDC1Q9NW68 430 aaPredicted RBP18.43■□□□□ 0.54
HMBOX1-210ENST00000523613 DBNLQ9UJU6 430 aaKnown RBP18.43■□□□□ 0.54
HMBOX1-210ENST00000523613 SPEF2Q9C093 1822 aa18.42■□□□□ 0.54
HMBOX1-210ENST00000523613 A0A1B0GUL7 405 aa18.42■□□□□ 0.54
HMBOX1-210ENST00000523613 PDE8BO95263 885 aa18.42■□□□□ 0.54
HMBOX1-210ENST00000523613 RPS8P62241 208 aaKnown RBP18.42■□□□□ 0.54
HMBOX1-210ENST00000523613 ATP2B3Q16720 1220 aa18.42■□□□□ 0.54
HMBOX1-210ENST00000523613 CRY2Q49AN0 593 aa18.42■□□□□ 0.54
HMBOX1-210ENST00000523613 SLC16A10Q8TF71 515 aa18.42■□□□□ 0.54
HMBOX1-210ENST00000523613 CELF1Q92879 486 aaKnown RBP18.42■□□□□ 0.54
HMBOX1-210ENST00000523613 DBNDD2Q9BQY9 259 aa18.42■□□□□ 0.54
HMBOX1-210ENST00000523613 BRIP1Q9BX63 1249 aa18.42■□□□□ 0.54
HMBOX1-210ENST00000523613 SDSP20132 328 aa18.41■□□□□ 0.54
HMBOX1-210ENST00000523613 TIMM10P62072 90 aa18.41■□□□□ 0.54
HMBOX1-210ENST00000523613 VGLL2Q8N8G2 317 aa18.41■□□□□ 0.54
HMBOX1-210ENST00000523613 RBM17Q96I25 401 aaKnown RBP18.41■□□□□ 0.54
HMBOX1-210ENST00000523613 TRIM6-TRIM34B2RNG4 842 aa18.4■□□□□ 0.54
HMBOX1-210ENST00000523613 GRAPQ13588 217 aa18.4■□□□□ 0.54
HMBOX1-210ENST00000523613 PUM3Q15397 648 aaKnown RBP18.4■□□□□ 0.54
HMBOX1-210ENST00000523613 GORABQ5T7V8 394 aa18.4■□□□□ 0.54
HMBOX1-210ENST00000523613 HELBQ8NG08 1087 aaPredicted RBP18.4■□□□□ 0.54
HMBOX1-210ENST00000523613 GRAPLQ8TC17 118 aaPredicted RBP18.4■□□□□ 0.54
HMBOX1-210ENST00000523613 PDGFDQ9GZP0 370 aaPredicted RBP18.4■□□□□ 0.54
HMBOX1-210ENST00000523613 COL4A1P02462 1669 aa18.39■□□□□ 0.53
HMBOX1-210ENST00000523613 KLRG2A4D1S0 409 aaPredicted RBP18.39■□□□□ 0.53
HMBOX1-210ENST00000523613 CDC45O75419 566 aa18.39■□□□□ 0.53
HMBOX1-210ENST00000523613 PDE6BP35913 854 aa18.39■□□□□ 0.53
HMBOX1-210ENST00000523613 CHRNDQ07001 517 aa18.39■□□□□ 0.53
HMBOX1-210ENST00000523613 ATP5JP18859 108 aa18.38■□□□□ 0.53
HMBOX1-210ENST00000523613 RILPL2Q969X0 211 aa18.38■□□□□ 0.53
HMBOX1-210ENST00000523613 XAGE2Q96GT9 111 aa18.38■□□□□ 0.53
HMBOX1-210ENST00000523613 TAF1P21675 1872 aa18.38■□□□□ 0.53
HMBOX1-210ENST00000523613 SLC5A1P13866 664 aa18.37■□□□□ 0.53
HMBOX1-210ENST00000523613 HOXA10P31260 410 aaPredicted RBP18.37■□□□□ 0.53
HMBOX1-210ENST00000523613 CNTROBQ8N137 903 aa18.37■□□□□ 0.53
HMBOX1-210ENST00000523613 LPIN2Q92539 896 aa18.37■□□□□ 0.53
HMBOX1-210ENST00000523613 MINPP1Q9UNW1 487 aa18.37■□□□□ 0.53
HMBOX1-210ENST00000523613 ANKRD31Q8N7Z5 1873 aa18.37■□□□□ 0.53
HMBOX1-210ENST00000523613 TAF5LO75529 589 aa18.37■□□□□ 0.53
HMBOX1-210ENST00000523613 CCDC158Q5M9N0 1113 aa18.37■□□□□ 0.53
HMBOX1-210ENST00000523613 CASC1Q6TDU7 716 aa18.37■□□□□ 0.53
HMBOX1-210ENST00000523613 CRAMP1Q96RY5 1269 aa18.37■□□□□ 0.53
HMBOX1-210ENST00000523613 MAP4K4O95819 1239 aaPredicted RBP18.36■□□□□ 0.53
HMBOX1-210ENST00000523613 IFIT1P09914 478 aaKnown RBP18.36■□□□□ 0.53
HMBOX1-210ENST00000523613 FGFR2P21802 821 aa18.36■□□□□ 0.53
HMBOX1-210ENST00000523613 ADORA1P30542 326 aa18.36■□□□□ 0.53
HMBOX1-210ENST00000523613 ANKRD2Q9GZV1 360 aa18.36■□□□□ 0.53
HMBOX1-210ENST00000523613 BOLA2Q9H3K6 86 aa18.36■□□□□ 0.53
HMBOX1-210ENST00000523613 NPR1P16066 1061 aa18.35■□□□□ 0.53
HMBOX1-210ENST00000523613 TTC39AQ5SRH9 613 aa18.35■□□□□ 0.53
HMBOX1-210ENST00000523613 TBC1D9Q6ZT07 1266 aa18.35■□□□□ 0.53
HMBOX1-210ENST00000523613 BBOX1O75936 387 aa18.35■□□□□ 0.53
HMBOX1-210ENST00000523613 SRGNP10124 158 aa18.34■□□□□ 0.53
HMBOX1-210ENST00000523613 R3HDM1Q15032 1099 aaKnown RBP18.34■□□□□ 0.53
HMBOX1-210ENST00000523613 EVI5LQ96CN4 794 aa18.34■□□□□ 0.53
HMBOX1-210ENST00000523613 EIF5BO60841 1220 aaKnown RBP18.33■□□□□ 0.52
HMBOX1-210ENST00000523613 UBE4AQ14139 1066 aa18.33■□□□□ 0.52
HMBOX1-210ENST00000523613 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.33■□□□□ 0.52
HMBOX1-210ENST00000523613 HAUS7Q99871 368 aa18.33■□□□□ 0.52
HMBOX1-210ENST00000523613 ARAP2Q8WZ64 1704 aa18.33■□□□□ 0.52
HMBOX1-210ENST00000523613 KCNJ4P48050 445 aa18.32■□□□□ 0.52
HMBOX1-210ENST00000523613 TMC4Q7Z404 712 aa18.32■□□□□ 0.52
HMBOX1-210ENST00000523613 C2CD5Q86YS7 1000 aa18.32■□□□□ 0.52
HMBOX1-210ENST00000523613 MASTLQ96GX5 879 aa18.32■□□□□ 0.52
HMBOX1-210ENST00000523613 A0A1B0GUL6 1792 aa18.32■□□□□ 0.52
HMBOX1-210ENST00000523613 H0YIN7 160 aa18.32■□□□□ 0.52
HMBOX1-210ENST00000523613 ZBTB7AO95365 584 aa18.32■□□□□ 0.52
HMBOX1-210ENST00000523613 ALDH1B1P30837 517 aa18.32■□□□□ 0.52
HMBOX1-210ENST00000523613 DNAJC2Q99543 621 aaKnown RBP18.32■□□□□ 0.52
HMBOX1-210ENST00000523613 MTFR1LQ9H019 292 aa18.32■□□□□ 0.52
HMBOX1-210ENST00000523613 UPF2Q9HAU5 1272 aaKnown RBP18.32■□□□□ 0.52
HMBOX1-210ENST00000523613 SNAP23O00161 211 aa18.31■□□□□ 0.52
HMBOX1-210ENST00000523613 ANKIB1Q9P2G1 1089 aa18.31■□□□□ 0.52
HMBOX1-210ENST00000523613 AK9Q5TCS8 1911 aa18.3■□□□□ 0.52
HMBOX1-210ENST00000523613 PPEF1O14829 653 aaPredicted RBP18.3■□□□□ 0.52
HMBOX1-210ENST00000523613 SEC24BO95487 1268 aa18.3■□□□□ 0.52
HMBOX1-210ENST00000523613 UQCRFS1P1P0C7P4 283 aa18.3■□□□□ 0.52
HMBOX1-210ENST00000523613 POLD1P28340 1107 aa18.3■□□□□ 0.52
HMBOX1-210ENST00000523613 CCDC102BQ68D86 513 aa18.3■□□□□ 0.52
HMBOX1-210ENST00000523613 ZNF512BQ96KM6 892 aaPredicted RBP18.3■□□□□ 0.52
HMBOX1-210ENST00000523613 COL11A2P13942 1736 aaPredicted RBP18.3■□□□□ 0.52
HMBOX1-210ENST00000523613 CHMLP26374 656 aa18.29■□□□□ 0.52
HMBOX1-210ENST00000523613 MFAP1P55081 439 aaKnown RBP18.29■□□□□ 0.52
HMBOX1-210ENST00000523613 STYK1Q6J9G0 422 aa18.29■□□□□ 0.52
HMBOX1-210ENST00000523613 ZNF622Q969S3 477 aaKnown RBP eCLIP18.29■□□□□ 0.522e-7■■□□□ 13.4
HMBOX1-210ENST00000523613 FSD1Q9BTV5 496 aa18.29■□□□□ 0.52
HMBOX1-210ENST00000523613 XDHP47989 1333 aa18.29■□□□□ 0.52
HMBOX1-210ENST00000523613 C10orf71Q711Q0 1435 aa18.29■□□□□ 0.52
HMBOX1-210ENST00000523613 PHKA1P46020 1223 aa18.29■□□□□ 0.52
HMBOX1-210ENST00000523613 PAG1Q9NWQ8 432 aa18.29■□□□□ 0.52
HMBOX1-210ENST00000523613 LEMD3Q9Y2U8 911 aa18.29■□□□□ 0.52
HMBOX1-210ENST00000523613 RBM19Q9Y4C8 960 aaKnown RBP18.29■□□□□ 0.52
HMBOX1-210ENST00000523613 ZNF804BA4D1E1 1349 aa18.28■□□□□ 0.52
HMBOX1-210ENST00000523613 ARID4AP29374 1257 aaPredicted RBP18.28■□□□□ 0.52
HMBOX1-210ENST00000523613 CAVIN4Q5BKX8 364 aa18.28■□□□□ 0.52
HMBOX1-210ENST00000523613 DIAPH3Q9NSV4 1193 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms