RNA–Protein interactions for RNA: ENST00000523588.1

CPNE3-207, Transcript of copine 3, humanhuman

TSL 2

Gene CPNE3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-207ENST00000523588 PERM1Q5SV97 790 aa9.93□□□□□ -0.82
CPNE3-207ENST00000523588 MICALL1Q8N3F8 863 aa9.93□□□□□ -0.82
CPNE3-207ENST00000523588 SNX29Q8TEQ0 813 aa9.93□□□□□ -0.82
CPNE3-207ENST00000523588 MARSP56192 900 aaKnown RBP9.92□□□□□ -0.82
CPNE3-207ENST00000523588 HYAL2Q12891 473 aa9.92□□□□□ -0.82
CPNE3-207ENST00000523588 PSAPL1Q6NUJ1 521 aa9.92□□□□□ -0.82
CPNE3-207ENST00000523588 LINC00114Q6XXX2 140 aa9.92□□□□□ -0.82
CPNE3-207ENST00000523588 DMRTB1Q96MA1 342 aa9.92□□□□□ -0.82
CPNE3-207ENST00000523588 LPIN3Q9BQK8 851 aa9.92□□□□□ -0.82
CPNE3-207ENST00000523588 SALL4Q9UJQ4 1053 aa9.92□□□□□ -0.82
CPNE3-207ENST00000523588 PHF20L1A8MW92 1017 aa9.91□□□□□ -0.82
CPNE3-207ENST00000523588 M0R082 166 aa9.91□□□□□ -0.82
CPNE3-207ENST00000523588 EREGO14944 169 aa9.91□□□□□ -0.82
CPNE3-207ENST00000523588 PHACTR2O75167 634 aa9.91□□□□□ -0.82
CPNE3-207ENST00000523588 CES1P23141 567 aa9.91□□□□□ -0.82
CPNE3-207ENST00000523588 COL9A3Q14050 684 aaPredicted RBP9.91□□□□□ -0.82
CPNE3-207ENST00000523588 C8orf86Q6ZUL3 223 aa9.91□□□□□ -0.82
CPNE3-207ENST00000523588 ZNF417Q8TAU3 575 aa9.91□□□□□ -0.82
CPNE3-207ENST00000523588 TMC1Q8TDI8 760 aa9.91□□□□□ -0.82
CPNE3-207ENST00000523588 ALKBH8Q96BT7 664 aaKnown RBP9.91□□□□□ -0.82
CPNE3-207ENST00000523588 ZNF587Q96SQ5 575 aaPredicted RBP9.91□□□□□ -0.82
CPNE3-207ENST00000523588 RRAGCQ9HB90 399 aa9.91□□□□□ -0.82
CPNE3-207ENST00000523588 ZFYVE28Q9HCC9 887 aa9.91□□□□□ -0.82
CPNE3-207ENST00000523588 KANSL3Q9P2N6 904 aa9.91□□□□□ -0.82
CPNE3-207ENST00000523588 CNTNAP5Q8WYK1 1306 aa9.9□□□□□ -0.82
CPNE3-207ENST00000523588 PMEPA1Q969W9 287 aa9.9□□□□□ -0.82
CPNE3-207ENST00000523588 ASB16Q96NS5 453 aa9.9□□□□□ -0.82
CPNE3-207ENST00000523588 NIF3L1Q9GZT8 377 aa9.9□□□□□ -0.82
CPNE3-207ENST00000523588 PRDM6Q9NQX0 595 aa9.9□□□□□ -0.82
CPNE3-207ENST00000523588 FRRS1LQ9P0K9 344 aa9.9□□□□□ -0.82
CPNE3-207ENST00000523588 ZBTB7CA1YPR0 619 aa9.89□□□□□ -0.83
CPNE3-207ENST00000523588 EIF2AK2P19525 551 aaKnown RBP9.89□□□□□ -0.83
CPNE3-207ENST00000523588 ORC1Q13415 861 aa9.89□□□□□ -0.83
CPNE3-207ENST00000523588 DSC3Q14574 896 aa9.89□□□□□ -0.83
CPNE3-207ENST00000523588 CEP120Q8N960 986 aa9.89□□□□□ -0.83
CPNE3-207ENST00000523588 NUDT8Q8WV74 236 aa9.89□□□□□ -0.83
CPNE3-207ENST00000523588 TREHO43280 583 aa9.88□□□□□ -0.83
CPNE3-207ENST00000523588 GRIK5Q16478 980 aa9.88□□□□□ -0.83
CPNE3-207ENST00000523588 ELMSAN1Q6PJG2 1045 aa9.88□□□□□ -0.83
CPNE3-207ENST00000523588 TTC9Q92623 222 aa9.88□□□□□ -0.83
CPNE3-207ENST00000523588 PLD4Q96BZ4 506 aa9.88□□□□□ -0.83
CPNE3-207ENST00000523588 SMG9Q9H0W8 520 aaKnown RBP9.88□□□□□ -0.83
CPNE3-207ENST00000523588 RGS9O75916 674 aaPredicted RBP9.87□□□□□ -0.83
CPNE3-207ENST00000523588 GHRHP01286 108 aa9.87□□□□□ -0.83
CPNE3-207ENST00000523588 NEFLP07196 543 aa9.87□□□□□ -0.83
CPNE3-207ENST00000523588 USPL1Q5W0Q7 1092 aa9.87□□□□□ -0.83
CPNE3-207ENST00000523588 BEND7Q8N7W2 519 aaPredicted RBP9.87□□□□□ -0.83
CPNE3-207ENST00000523588 JPH1Q9HDC5 661 aaPredicted RBP9.87□□□□□ -0.83
CPNE3-207ENST00000523588 MKL2Q9ULH7 1088 aa9.87□□□□□ -0.83
CPNE3-207ENST00000523588 LILRB5O75023 590 aa9.86□□□□□ -0.83
CPNE3-207ENST00000523588 AFF1P51825 1210 aaKnown RBP9.86□□□□□ -0.83
CPNE3-207ENST00000523588 TRIM26Q12899 539 aaPredicted RBP9.86□□□□□ -0.83
CPNE3-207ENST00000523588 NCAPG2Q86XI2 1143 aa9.86□□□□□ -0.83
CPNE3-207ENST00000523588 ZSCAN29Q8IWY8 852 aaPredicted RBP9.86□□□□□ -0.83
CPNE3-207ENST00000523588 SCARF2Q96GP6 870 aaPredicted RBP9.86□□□□□ -0.83
CPNE3-207ENST00000523588 AMOTL2Q9Y2J4 779 aa9.86□□□□□ -0.83
CPNE3-207ENST00000523588 NID1P14543 1247 aa9.85□□□□□ -0.83
CPNE3-207ENST00000523588 ACPPP15309 386 aa9.85□□□□□ -0.83
CPNE3-207ENST00000523588 ATP11AP98196 1134 aa9.85□□□□□ -0.83
CPNE3-207ENST00000523588 ILDR2Q71H61 639 aa9.85□□□□□ -0.83
CPNE3-207ENST00000523588 TRIM11Q96F44 468 aa9.85□□□□□ -0.83
CPNE3-207ENST00000523588 SPACA7Q96KW9 195 aa9.85□□□□□ -0.83
CPNE3-207ENST00000523588 NFKBIEO00221 500 aa9.84□□□□□ -0.83
CPNE3-207ENST00000523588 EIF1AYO14602 144 aaKnown RBP9.84□□□□□ -0.83
CPNE3-207ENST00000523588 GNB5O14775 395 aa9.84□□□□□ -0.83
CPNE3-207ENST00000523588 CPNE3O75131 537 aaKnown RBP9.84□□□□□ -0.83
CPNE3-207ENST00000523588 POLR3DP05423 398 aaPredicted RBP9.84□□□□□ -0.83
CPNE3-207ENST00000523588 PLCB3Q01970 1234 aa9.84□□□□□ -0.83
CPNE3-207ENST00000523588 DNAJC14Q6Y2X3 702 aaPredicted RBP9.84□□□□□ -0.83
CPNE3-207ENST00000523588 PODNQ7Z5L7 613 aa9.84□□□□□ -0.83
CPNE3-207ENST00000523588 GALNT12Q8IXK2 581 aa9.84□□□□□ -0.83
CPNE3-207ENST00000523588 CSRNP1Q96S65 589 aa9.84□□□□□ -0.83
CPNE3-207ENST00000523588 RBSNQ9H1K0 784 aa9.84□□□□□ -0.83
CPNE3-207ENST00000523588 DNAJC25Q9H1X3 360 aa9.84□□□□□ -0.83
CPNE3-207ENST00000523588 RASSF4Q9H2L5 321 aa9.84□□□□□ -0.83
CPNE3-207ENST00000523588 FMR1Q06787 632 aaKnown RBP eCLIP9.83□□□□□ -0.84
CPNE3-207ENST00000523588 PEAR1Q5VY43 1037 aaPredicted RBP9.83□□□□□ -0.84
CPNE3-207ENST00000523588 PBX4Q9BYU1 374 aa9.83□□□□□ -0.84
CPNE3-207ENST00000523588 SUV39H2Q9H5I1 410 aa9.83□□□□□ -0.84
CPNE3-207ENST00000523588 LATS2Q9NRM7 1088 aa9.83□□□□□ -0.84
CPNE3-207ENST00000523588 DZANK1Q9NVP4 752 aa9.83□□□□□ -0.84
CPNE3-207ENST00000523588 EDN3P14138 238 aa9.82□□□□□ -0.84
CPNE3-207ENST00000523588 CCDC27Q2M243 656 aa9.82□□□□□ -0.84
CPNE3-207ENST00000523588 ADAMTSL4Q6UY14 1074 aa9.82□□□□□ -0.84
CPNE3-207ENST00000523588 TRIM33Q9UPN9 1127 aa9.82□□□□□ -0.84
CPNE3-207ENST00000523588 TRPA1O75762 1119 aa9.81□□□□□ -0.84
CPNE3-207ENST00000523588 BAG6P46379 1132 aa9.81□□□□□ -0.84
CPNE3-207ENST00000523588 ZKSCAN3Q9BRR0 538 aa9.81□□□□□ -0.84
CPNE3-207ENST00000523588 ANKRD33BA6NCL7 494 aa9.8□□□□□ -0.84
CPNE3-207ENST00000523588 GSK3AP49840 483 aa9.8□□□□□ -0.84
CPNE3-207ENST00000523588 ENOX2Q16206 610 aaKnown RBP9.8□□□□□ -0.84
CPNE3-207ENST00000523588 CCDC74AQ96AQ1 378 aa9.8□□□□□ -0.84
CPNE3-207ENST00000523588 HHIPQ96QV1 700 aa9.8□□□□□ -0.84
CPNE3-207ENST00000523588 POP1Q99575 1024 aaKnown RBP9.8□□□□□ -0.84
CPNE3-207ENST00000523588 OSMRQ99650 979 aa9.8□□□□□ -0.84
CPNE3-207ENST00000523588 PLVAPQ9BX97 442 aa9.8□□□□□ -0.84
CPNE3-207ENST00000523588 A0A1W2PP55 124 aa9.79□□□□□ -0.84
CPNE3-207ENST00000523588 PIK3R2O00459 728 aa9.79□□□□□ -0.84
CPNE3-207ENST00000523588 SMNDC1O75940 238 aaKnown RBP eCLIP9.79□□□□□ -0.84
CPNE3-207ENST00000523588 COL8A1P27658 744 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms