RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 MARCKSP29966 332 aaPredicted RBP10.44□□□□□ -0.74
CSMD1-212ENST00000523387 FANCCQ00597 558 aa10.44□□□□□ -0.74
CSMD1-212ENST00000523387 NECTIN1Q15223 517 aa10.44□□□□□ -0.74
CSMD1-212ENST00000523387 TAF7LQ5H9L4 462 aa10.44□□□□□ -0.74
CSMD1-212ENST00000523387 KCNG4Q8TDN1 519 aa10.44□□□□□ -0.74
CSMD1-212ENST00000523387 EDC3Q96F86 508 aaKnown RBP10.44□□□□□ -0.74
CSMD1-212ENST00000523387 ORC3Q9UBD5 711 aaPredicted RBP10.44□□□□□ -0.74
CSMD1-212ENST00000523387 ZNF330Q9Y3S2 320 aaPredicted RBP10.44□□□□□ -0.74
CSMD1-212ENST00000523387 GOLGA6L9A6NEM1 432 aa10.44□□□□□ -0.74
CSMD1-212ENST00000523387 SPTLC2O15270 562 aa10.44□□□□□ -0.74
CSMD1-212ENST00000523387 FAM193AP78312 1265 aa10.44□□□□□ -0.74
CSMD1-212ENST00000523387 IRX3P78415 501 aaPredicted RBP10.44□□□□□ -0.74
CSMD1-212ENST00000523387 SMC1AQ14683 1233 aaKnown RBP10.44□□□□□ -0.74
CSMD1-212ENST00000523387 KARSQ15046 597 aaKnown RBP10.44□□□□□ -0.74
CSMD1-212ENST00000523387 LRRFIP1Q32MZ4 808 aaKnown RBP10.44□□□□□ -0.74
CSMD1-212ENST00000523387 MPRIPQ6WCQ1 1025 aa10.44□□□□□ -0.74
CSMD1-212ENST00000523387 TMEM51Q9NW97 253 aa10.44□□□□□ -0.74
CSMD1-212ENST00000523387 VPS18Q9P253 973 aa10.44□□□□□ -0.74
CSMD1-212ENST00000523387 EID1Q9Y6B2 187 aa10.44□□□□□ -0.74
CSMD1-212ENST00000523387 SLFNL1Q499Z3 407 aa10.43□□□□□ -0.74
CSMD1-212ENST00000523387 SARM1Q6SZW1 724 aa10.43□□□□□ -0.74
CSMD1-212ENST00000523387 IPO4Q8TEX9 1081 aaKnown RBP10.43□□□□□ -0.74
CSMD1-212ENST00000523387 CPLX3Q8WVH0 158 aa10.43□□□□□ -0.74
CSMD1-212ENST00000523387 GOLGA1Q92805 767 aa10.43□□□□□ -0.74
CSMD1-212ENST00000523387 SLC26A8Q96RN1 970 aa10.43□□□□□ -0.74
CSMD1-212ENST00000523387 DEF6Q9H4E7 631 aa10.43□□□□□ -0.74
CSMD1-212ENST00000523387 MAP3K5Q99683 1374 aa10.43□□□□□ -0.74
CSMD1-212ENST00000523387 SYKP43405 635 aa10.43□□□□□ -0.74
CSMD1-212ENST00000523387 GTF2A1P52655 376 aaPredicted RBP10.43□□□□□ -0.74
CSMD1-212ENST00000523387 PPP2R3AQ06190 1150 aa10.43□□□□□ -0.74
CSMD1-212ENST00000523387 PLEKHO1Q53GL0 409 aaPredicted RBP10.43□□□□□ -0.74
CSMD1-212ENST00000523387 OTUD7BQ6GQQ9 843 aa10.43□□□□□ -0.74
CSMD1-212ENST00000523387 SALL3Q9BXA9 1300 aa10.43□□□□□ -0.74
CSMD1-212ENST00000523387 ERCC6L2Q5T890 1561 aa10.43□□□□□ -0.74
CSMD1-212ENST00000523387 KIF5CO60282 957 aa10.43□□□□□ -0.74
CSMD1-212ENST00000523387 NDUFB9Q9Y6M9 179 aa10.43□□□□□ -0.74
CSMD1-212ENST00000523387 ATP7BP35670 1465 aa10.43□□□□□ -0.74
CSMD1-212ENST00000523387 FLT4P35916 1363 aa10.42□□□□□ -0.74
CSMD1-212ENST00000523387 PSDA5PKW4 1024 aaPredicted RBP10.42□□□□□ -0.74
CSMD1-212ENST00000523387 GOLGA8BA8MQT2 603 aa10.42□□□□□ -0.74
CSMD1-212ENST00000523387 GRM8O00222 908 aa10.42□□□□□ -0.74
CSMD1-212ENST00000523387 SAFBQ15424 915 aaKnown RBP eCLIP10.42□□□□□ -0.74
CSMD1-212ENST00000523387 TSR1Q2NL82 804 aaKnown RBP10.42□□□□□ -0.74
CSMD1-212ENST00000523387 KLHDC4Q8TBB5 520 aa10.42□□□□□ -0.74
CSMD1-212ENST00000523387 USP32Q8NFA0 1604 aa10.42□□□□□ -0.74
CSMD1-212ENST00000523387 PHACTR2O75167 634 aa10.42□□□□□ -0.74
CSMD1-212ENST00000523387 ALDH1L1O75891 902 aa10.42□□□□□ -0.74
CSMD1-212ENST00000523387 RBM6P78332 1123 aaKnown RBP10.42□□□□□ -0.74
CSMD1-212ENST00000523387 RESTQ13127 1097 aa10.42□□□□□ -0.74
CSMD1-212ENST00000523387 MCMDC2Q4G0Z9 681 aa10.42□□□□□ -0.74
CSMD1-212ENST00000523387 AXDND1Q5T1B0 1012 aaPredicted RBP10.42□□□□□ -0.74
CSMD1-212ENST00000523387 DHX32Q7L7V1 743 aaKnown RBP10.42□□□□□ -0.74
CSMD1-212ENST00000523387 CNNM3Q8NE01 707 aa10.42□□□□□ -0.74
CSMD1-212ENST00000523387 PUF60Q9UHX1 559 aaKnown RBP10.42□□□□□ -0.74
CSMD1-212ENST00000523387 GOLIM4O00461 696 aa10.42□□□□□ -0.74
CSMD1-212ENST00000523387 SETQ01105 290 aaPredicted RBP10.42□□□□□ -0.74
CSMD1-212ENST00000523387 POLA2Q14181 598 aa10.42□□□□□ -0.74
CSMD1-212ENST00000523387 EAF2Q96CJ1 260 aaPredicted RBP10.42□□□□□ -0.74
CSMD1-212ENST00000523387 KIAA1468Q9P260 1216 aa10.42□□□□□ -0.74
CSMD1-212ENST00000523387 HAND2P61296 217 aa10.41□□□□□ -0.74
CSMD1-212ENST00000523387 DPCR1Q3MIW9 517 aa10.41□□□□□ -0.74
CSMD1-212ENST00000523387 NAA16Q6N069 864 aaPredicted RBP10.41□□□□□ -0.74
CSMD1-212ENST00000523387 TTC21AQ8NDW8 1320 aa10.41□□□□□ -0.74
CSMD1-212ENST00000523387 IVLP07476 585 aa10.41□□□□□ -0.74
CSMD1-212ENST00000523387 FKBP4Q02790 459 aaKnown RBP eCLIP10.41□□□□□ -0.74
CSMD1-212ENST00000523387 IQCB1Q15051 598 aa10.41□□□□□ -0.74
CSMD1-212ENST00000523387 FILIP1LQ4L180 1135 aa10.41□□□□□ -0.74
CSMD1-212ENST00000523387 ATL3Q6DD88 541 aa10.41□□□□□ -0.74
CSMD1-212ENST00000523387 CERS3Q8IU89 383 aa10.41□□□□□ -0.74
CSMD1-212ENST00000523387 BICC1Q9H694 974 aaKnown RBP10.41□□□□□ -0.74
CSMD1-212ENST00000523387 ZCCHC11Q5TAX3 1644 aaKnown RBP10.41□□□□□ -0.74
CSMD1-212ENST00000523387 CCZ1BP86790 482 aa10.41□□□□□ -0.74
CSMD1-212ENST00000523387 CCZ1P86791 482 aaPredicted RBP10.41□□□□□ -0.74
CSMD1-212ENST00000523387 MYL5Q02045 173 aa10.41□□□□□ -0.74
CSMD1-212ENST00000523387 KLHL10Q6JEL2 608 aa10.41□□□□□ -0.74
CSMD1-212ENST00000523387 KSR2Q6VAB6 950 aa10.41□□□□□ -0.74
CSMD1-212ENST00000523387 ANKRD20A12PQ8NF67 263 aa10.41□□□□□ -0.74
CSMD1-212ENST00000523387 IL17REQ8NFR9 667 aa10.41□□□□□ -0.74
CSMD1-212ENST00000523387 SMARCE1Q969G3 411 aa10.41□□□□□ -0.74
CSMD1-212ENST00000523387 MYD88Q99836 296 aa10.41□□□□□ -0.74
CSMD1-212ENST00000523387 LLPHQ9BRT6 129 aaKnown RBP10.41□□□□□ -0.74
CSMD1-212ENST00000523387 GBP3Q9H0R5 595 aa10.41□□□□□ -0.74
CSMD1-212ENST00000523387 DACH1Q9UI36 760 aa10.41□□□□□ -0.74
CSMD1-212ENST00000523387 PPRC1Q5VV67 1664 aaKnown RBP10.41□□□□□ -0.74
CSMD1-212ENST00000523387 EFCAB8A8MWE9 144 aa10.41□□□□□ -0.74
CSMD1-212ENST00000523387 BEND3Q5T5X7 828 aa10.41□□□□□ -0.74
CSMD1-212ENST00000523387 CCDC70Q6NSX1 233 aa10.41□□□□□ -0.74
CSMD1-212ENST00000523387 CAGE1Q8TC20 777 aa10.41□□□□□ -0.74
CSMD1-212ENST00000523387 ZCCHC17Q9NP64 241 aaKnown RBP10.41□□□□□ -0.74
CSMD1-212ENST00000523387 LZTFL1Q9NQ48 299 aa10.41□□□□□ -0.74
CSMD1-212ENST00000523387 MYO3AQ8NEV4 1616 aa10.4□□□□□ -0.74
CSMD1-212ENST00000523387 AKAP17AQ02040 695 aaKnown RBP10.4□□□□□ -0.74
CSMD1-212ENST00000523387 RAD51AP2Q09MP3 1159 aa10.4□□□□□ -0.74
CSMD1-212ENST00000523387 NYAP1Q6ZVC0 841 aa10.4□□□□□ -0.74
CSMD1-212ENST00000523387 ZNF589Q86UQ0 364 aaPredicted RBP10.4□□□□□ -0.74
CSMD1-212ENST00000523387 BAG1Q99933 345 aaPredicted RBP10.4□□□□□ -0.74
CSMD1-212ENST00000523387 RNF216Q9NWF9 866 aaPredicted RBP10.4□□□□□ -0.74
CSMD1-212ENST00000523387 ZNF202O95125 648 aa10.4□□□□□ -0.74
CSMD1-212ENST00000523387 CYP2C19P33261 490 aa10.4□□□□□ -0.74
CSMD1-212ENST00000523387 TOB2Q14106 344 aaPredicted RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms