RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 MZF1P28698 734 aaPredicted RBP8.59□□□□□ -1.03
SKP1-211ENST00000523359 FAM13BQ9NYF5 915 aa8.59□□□□□ -1.03
SKP1-211ENST00000523359 PDGFAP04085 211 aa8.58□□□□□ -1.04
SKP1-211ENST00000523359 ITGB7P26010 798 aa8.58□□□□□ -1.04
SKP1-211ENST00000523359 XP32Q5T750 250 aa8.58□□□□□ -1.04
SKP1-211ENST00000523359 DNAJC14Q6Y2X3 702 aaPredicted RBP8.58□□□□□ -1.04
SKP1-211ENST00000523359 NUDT16Q96DE0 195 aaKnown RBP8.58□□□□□ -1.04
SKP1-211ENST00000523359 NACC1Q96RE7 527 aa8.58□□□□□ -1.04
SKP1-211ENST00000523359 A0A0A0MRY4 1105 aa8.57□□□□□ -1.04
SKP1-211ENST00000523359 TARSP26639 723 aaKnown RBP8.57□□□□□ -1.04
SKP1-211ENST00000523359 AFF1P51825 1210 aaKnown RBP8.57□□□□□ -1.04
SKP1-211ENST00000523359 CMTR1Q8N1G2 835 aaKnown RBP8.57□□□□□ -1.04
SKP1-211ENST00000523359 RGS22Q8NE09 1264 aa8.57□□□□□ -1.04
SKP1-211ENST00000523359 TMC1Q8TDI8 760 aa8.57□□□□□ -1.04
SKP1-211ENST00000523359 PIK3R5Q8WYR1 880 aa8.57□□□□□ -1.04
SKP1-211ENST00000523359 ASB16Q96NS5 453 aa8.57□□□□□ -1.04
SKP1-211ENST00000523359 RBCK1Q9BYM8 510 aa8.57□□□□□ -1.04
SKP1-211ENST00000523359 TPSG1Q9NRR2 321 aa8.57□□□□□ -1.04
SKP1-211ENST00000523359 ZFATQ9P243 1243 aa8.57□□□□□ -1.04
SKP1-211ENST00000523359 RTCBQ9Y3I0 505 aaKnown RBP8.57□□□□□ -1.04
SKP1-211ENST00000523359 RGS9O75916 674 aaPredicted RBP8.56□□□□□ -1.04
SKP1-211ENST00000523359 CPB1P15086 417 aa8.56□□□□□ -1.04
SKP1-211ENST00000523359 FAM35AQ86V20 835 aa8.56□□□□□ -1.04
SKP1-211ENST00000523359 ZSCAN29Q8IWY8 852 aaPredicted RBP8.56□□□□□ -1.04
SKP1-211ENST00000523359 A6NHS1 94 aa8.55□□□□□ -1.04
SKP1-211ENST00000523359 SASH3O75995 380 aa8.55□□□□□ -1.04
SKP1-211ENST00000523359 PCSK2P16519 638 aa8.55□□□□□ -1.04
SKP1-211ENST00000523359 MLLT1Q03111 559 aaPredicted RBP8.55□□□□□ -1.04
SKP1-211ENST00000523359 RSPO4Q2I0M5 234 aaPredicted RBP8.55□□□□□ -1.04
SKP1-211ENST00000523359 C8orf34Q49A92 452 aa8.55□□□□□ -1.04
SKP1-211ENST00000523359 DHX32Q7L7V1 743 aaKnown RBP8.55□□□□□ -1.04
SKP1-211ENST00000523359 TMC7Q7Z402 723 aa8.55□□□□□ -1.04
SKP1-211ENST00000523359 GJD3Q8N144 294 aa8.55□□□□□ -1.04
SKP1-211ENST00000523359 CITED4Q96RK1 184 aa8.55□□□□□ -1.04
SKP1-211ENST00000523359 GGNBP2Q9H3C7 697 aa8.55□□□□□ -1.04
SKP1-211ENST00000523359 ANKRD33BA6NCL7 494 aa8.54□□□□□ -1.04
SKP1-211ENST00000523359 ZBTB42B2RXF5 422 aa8.54□□□□□ -1.04
SKP1-211ENST00000523359 MAP3K6O95382 1288 aa8.54□□□□□ -1.04
SKP1-211ENST00000523359 RARAP10276 462 aa8.54□□□□□ -1.04
SKP1-211ENST00000523359 USP5P45974 858 aa8.54□□□□□ -1.04
SKP1-211ENST00000523359 RAC1P63000 192 aa8.54□□□□□ -1.04
SKP1-211ENST00000523359 SHISA2Q6UWI4 295 aa8.54□□□□□ -1.04
SKP1-211ENST00000523359 DMRTC2Q8IXT2 367 aaPredicted RBP8.54□□□□□ -1.04
SKP1-211ENST00000523359 FOXD4L4Q8WXT5 416 aaPredicted RBP8.54□□□□□ -1.04
SKP1-211ENST00000523359 FAM129BQ96TA1 746 aa8.54□□□□□ -1.04
SKP1-211ENST00000523359 KCNMB2Q9Y691 235 aa8.54□□□□□ -1.04
SKP1-211ENST00000523359 ELNP15502 786 aa8.53□□□□□ -1.04
SKP1-211ENST00000523359 SELPP16109 830 aa8.53□□□□□ -1.04
SKP1-211ENST00000523359 TRIP4Q15650 581 aaPredicted RBP8.53□□□□□ -1.04
SKP1-211ENST00000523359 NKAPLQ5M9Q1 402 aa8.53□□□□□ -1.04
SKP1-211ENST00000523359 Q8N3U1 123 aa8.53□□□□□ -1.04
SKP1-211ENST00000523359 C9orf172C9J069 976 aa8.52□□□□□ -1.05
SKP1-211ENST00000523359 GPR182O15218 404 aa8.52□□□□□ -1.05
SKP1-211ENST00000523359 IGHA2P01877 340 aa8.52□□□□□ -1.05
SKP1-211ENST00000523359 PLAURQ03405 335 aa8.52□□□□□ -1.05
SKP1-211ENST00000523359 PDE3BQ13370 1112 aa8.52□□□□□ -1.05
SKP1-211ENST00000523359 PCSK7Q16549 785 aa8.52□□□□□ -1.05
SKP1-211ENST00000523359 PERM1Q5SV97 790 aa8.52□□□□□ -1.05
SKP1-211ENST00000523359 TTC16Q8NEE8 873 aa8.52□□□□□ -1.05
SKP1-211ENST00000523359 LPIN3Q9BQK8 851 aa8.52□□□□□ -1.05
SKP1-211ENST00000523359 UBAP1LF5GYI3 381 aa8.51□□□□□ -1.05
SKP1-211ENST00000523359 RPLP1P05386 114 aaKnown RBP8.51□□□□□ -1.05
SKP1-211ENST00000523359 ERCC3P19447 782 aa8.51□□□□□ -1.05
SKP1-211ENST00000523359 ADGRE1Q14246 886 aa8.51□□□□□ -1.05
SKP1-211ENST00000523359 MBTPS1Q14703 1052 aa8.51□□□□□ -1.05
SKP1-211ENST00000523359 ELMSAN1Q6PJG2 1045 aa8.51□□□□□ -1.05
SKP1-211ENST00000523359 HFE2Q6ZVN8 426 aa8.51□□□□□ -1.05
SKP1-211ENST00000523359 NPAS4Q8IUM7 802 aa8.51□□□□□ -1.05
SKP1-211ENST00000523359 FMR1NBQ8N0W7 255 aaPredicted RBP8.51□□□□□ -1.05
SKP1-211ENST00000523359 TRPM4Q8TD43 1214 aa8.51□□□□□ -1.05
SKP1-211ENST00000523359 FNDC3AQ9Y2H6 1198 aaKnown RBP8.51□□□□□ -1.05
SKP1-211ENST00000523359 XYLBO75191 536 aa8.5□□□□□ -1.05
SKP1-211ENST00000523359 GPLD1P80108 840 aa8.5□□□□□ -1.05
SKP1-211ENST00000523359 EHHADHQ08426 723 aa8.5□□□□□ -1.05
SKP1-211ENST00000523359 GRIK5Q16478 980 aa8.5□□□□□ -1.05
SKP1-211ENST00000523359 MSL1Q68DK7 614 aa8.5□□□□□ -1.05
SKP1-211ENST00000523359 DMRTB1Q96MA1 342 aa8.5□□□□□ -1.05
SKP1-211ENST00000523359 NIF3L1Q9GZT8 377 aa8.5□□□□□ -1.05
SKP1-211ENST00000523359 C11orf16Q9NQ32 467 aa8.5□□□□□ -1.05
SKP1-211ENST00000523359 TREHO43280 583 aa8.49□□□□□ -1.05
SKP1-211ENST00000523359 DYRK3O43781 588 aa8.49□□□□□ -1.05
SKP1-211ENST00000523359 ZNF438Q7Z4V0 828 aa8.49□□□□□ -1.05
SKP1-211ENST00000523359 LENG1Q96BZ8 264 aaPredicted RBP8.49□□□□□ -1.05
SKP1-211ENST00000523359 FRRS1LQ9P0K9 344 aa8.49□□□□□ -1.05
SKP1-211ENST00000523359 USP21Q9UK80 565 aa8.49□□□□□ -1.05
SKP1-211ENST00000523359 EGFRP00533 1210 aa8.48□□□□□ -1.05
SKP1-211ENST00000523359 ZMYM1Q5SVZ6 1142 aa8.48□□□□□ -1.05
SKP1-211ENST00000523359 ILDR2Q71H61 639 aa8.48□□□□□ -1.05
SKP1-211ENST00000523359 SMG9Q9H0W8 520 aaKnown RBP8.48□□□□□ -1.05
SKP1-211ENST00000523359 EIF2AK2P19525 551 aaKnown RBP8.47□□□□□ -1.05
SKP1-211ENST00000523359 PLCB3Q01970 1234 aa8.47□□□□□ -1.05
SKP1-211ENST00000523359 NRG1Q02297 640 aaPredicted RBP8.47□□□□□ -1.05
SKP1-211ENST00000523359 DSC3Q14574 896 aa8.47□□□□□ -1.05
SKP1-211ENST00000523359 PDE12Q6L8Q7 609 aaKnown RBP8.47□□□□□ -1.05
SKP1-211ENST00000523359 XKR5Q6UX68 686 aa8.47□□□□□ -1.05
SKP1-211ENST00000523359 TXNRD3Q86VQ6 643 aa8.47□□□□□ -1.05
SKP1-211ENST00000523359 WFDC8Q8IUA0 241 aa8.47□□□□□ -1.05
SKP1-211ENST00000523359 ALKBH8Q96BT7 664 aaKnown RBP8.47□□□□□ -1.05
SKP1-211ENST00000523359 TLR7Q9NYK1 1049 aaKnown RBP8.47□□□□□ -1.05
SKP1-211ENST00000523359 TMEM63CQ9P1W3 806 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms