RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 DBNDD1Q9H9R9 158 aa20.67■□□□□ 0.9
CLN8-206ENST00000523237 ADARB2Q9NS39 739 aaKnown RBP20.67■□□□□ 0.9
CLN8-206ENST00000523237 GGA1Q9UJY5 639 aa20.67■□□□□ 0.9
CLN8-206ENST00000523237 UFL1O94874 794 aa20.66■□□□□ 0.9
CLN8-206ENST00000523237 PLA2G12BQ9BX93 195 aa20.66■□□□□ 0.9
CLN8-206ENST00000523237 GREM2Q9H772 168 aa20.66■□□□□ 0.9
CLN8-206ENST00000523237 XDHP47989 1333 aa20.65■□□□□ 0.9
CLN8-206ENST00000523237 E9PSI1 815 aa20.64■□□□□ 0.89
CLN8-206ENST00000523237 F6X3S4 739 aa20.64■□□□□ 0.89
CLN8-206ENST00000523237 G3V3G9 751 aa20.64■□□□□ 0.89
CLN8-206ENST00000523237 ECE2O60344 883 aa20.64■□□□□ 0.89
CLN8-206ENST00000523237 CASP7P55210 303 aa20.64■□□□□ 0.89
CLN8-206ENST00000523237 DCAF8Q5TAQ9 597 aa20.64■□□□□ 0.89
CLN8-206ENST00000523237 GPR101Q96P66 508 aaPredicted RBP20.64■□□□□ 0.89
CLN8-206ENST00000523237 BSDC1Q9NW68 430 aaPredicted RBP20.64■□□□□ 0.89
CLN8-206ENST00000523237 TMEM88BA6NKF7 163 aa20.63■□□□□ 0.89
CLN8-206ENST00000523237 CCER2I3L3R5 266 aa20.63■□□□□ 0.89
CLN8-206ENST00000523237 DOK7Q18PE1 504 aa20.63■□□□□ 0.89
CLN8-206ENST00000523237 BEND3Q5T5X7 828 aa20.63■□□□□ 0.89
CLN8-206ENST00000523237 PSMD14O00487 310 aa20.62■□□□□ 0.89
CLN8-206ENST00000523237 ATP2B4P23634 1241 aa20.62■□□□□ 0.89
CLN8-206ENST00000523237 IGHMBP2P38935 993 aaKnown RBP20.62■□□□□ 0.89
CLN8-206ENST00000523237 CNOT7Q9UIV1 285 aaKnown RBP20.62■□□□□ 0.89
CLN8-206ENST00000523237 SCN9AQ15858 1988 aa20.61■□□□□ 0.89
CLN8-206ENST00000523237 TRPM7Q96QT4 1865 aa20.61■□□□□ 0.89
CLN8-206ENST00000523237 CSF1RP07333 972 aa20.61■□□□□ 0.89
CLN8-206ENST00000523237 ITGA6P23229 1130 aa20.61■□□□□ 0.89
CLN8-206ENST00000523237 DPF2Q92785 391 aa20.61■□□□□ 0.89
CLN8-206ENST00000523237 MINPP1Q9UNW1 487 aa20.61■□□□□ 0.89
CLN8-206ENST00000523237 ZBTB12Q9Y330 459 aaPredicted RBP20.61■□□□□ 0.89
CLN8-206ENST00000523237 PSME4Q14997 1843 aa20.61■□□□□ 0.89
CLN8-206ENST00000523237 H7C1D1 291 aa20.6■□□□□ 0.89
CLN8-206ENST00000523237 RPS12P25398 132 aaKnown RBP20.6■□□□□ 0.89
CLN8-206ENST00000523237 FAM161AQ3B820 660 aa20.6■□□□□ 0.89
CLN8-206ENST00000523237 MKRN1Q9UHC7 482 aaKnown RBP20.6■□□□□ 0.89
CLN8-206ENST00000523237 SLFN5Q08AF3 891 aa20.59■□□□□ 0.89
CLN8-206ENST00000523237 SLC4A10Q6U841 1118 aa20.59■□□□□ 0.89
CLN8-206ENST00000523237 MICALL2Q8IY33 904 aa20.59■□□□□ 0.89
CLN8-206ENST00000523237 MPHOSPH8Q99549 860 aa20.59■□□□□ 0.89
CLN8-206ENST00000523237 GRM8O00222 908 aa20.58■□□□□ 0.89
CLN8-206ENST00000523237 ALDH1L1O75891 902 aa20.58■□□□□ 0.89
CLN8-206ENST00000523237 ZC3H15Q8WU90 426 aaKnown RBP20.58■□□□□ 0.89
CLN8-206ENST00000523237 KCNQ5Q9NR82 932 aa20.58■□□□□ 0.89
CLN8-206ENST00000523237 CNTNAP1P78357 1384 aa20.58■□□□□ 0.88
CLN8-206ENST00000523237 ANKRD18BA2A2Z9 1011 aa20.57■□□□□ 0.88
CLN8-206ENST00000523237 CCT4P50991 539 aaKnown RBP20.57■□□□□ 0.88
CLN8-206ENST00000523237 SRCIN1Q9C0H9 1055 aa20.57■□□□□ 0.88
CLN8-206ENST00000523237 C9orf78Q9NZ63 289 aaPredicted RBP20.57■□□□□ 0.88
CLN8-206ENST00000523237 PGAP2Q9UHJ9 254 aa20.57■□□□□ 0.88
CLN8-206ENST00000523237 MED23Q9ULK4 1368 aa20.57■□□□□ 0.88
CLN8-206ENST00000523237 SHTN1A0MZ66 631 aa20.56■□□□□ 0.88
CLN8-206ENST00000523237 VIL1P09327 827 aaKnown RBP20.56■□□□□ 0.88
CLN8-206ENST00000523237 HIRAP54198 1017 aaPredicted RBP20.56■□□□□ 0.88
CLN8-206ENST00000523237 FOXO4P98177 505 aa20.56■□□□□ 0.88
CLN8-206ENST00000523237 MRPL50Q8N5N7 158 aaKnown RBP20.56■□□□□ 0.88
CLN8-206ENST00000523237 TRPM4Q8TD43 1214 aa20.56■□□□□ 0.88
CLN8-206ENST00000523237 ANKRD2Q9GZV1 360 aa20.56■□□□□ 0.88
CLN8-206ENST00000523237 IFIT5Q13325 482 aaKnown RBP20.55■□□□□ 0.88
CLN8-206ENST00000523237 PODNQ7Z5L7 613 aa20.55■□□□□ 0.88
CLN8-206ENST00000523237 LEMD3Q9Y2U8 911 aa20.55■□□□□ 0.88
CLN8-206ENST00000523237 CHMP3Q9Y3E7 222 aa20.55■□□□□ 0.88
CLN8-206ENST00000523237 PTPRCP08575 1304 aa20.54■□□□□ 0.88
CLN8-206ENST00000523237 TRAF5O00463 557 aa20.54■□□□□ 0.88
CLN8-206ENST00000523237 CDCA7LQ96GN5 454 aa20.54■□□□□ 0.88
CLN8-206ENST00000523237 ABT1Q9ULW3 272 aaKnown RBP20.54■□□□□ 0.88
CLN8-206ENST00000523237 A0A1B0GUL6 1792 aa20.54■□□□□ 0.88
CLN8-206ENST00000523237 ZNF609O15014 1411 aa20.53■□□□□ 0.88
CLN8-206ENST00000523237 WTIPA6NIX2 430 aaPredicted RBP20.53■□□□□ 0.88
CLN8-206ENST00000523237 FMR1Q06787 632 aaKnown RBP eCLIP20.53■□□□□ 0.88
CLN8-206ENST00000523237 LMBR1LQ6UX01 489 aa20.53■□□□□ 0.88
CLN8-206ENST00000523237 SAMD7Q7Z3H4 446 aa20.53■□□□□ 0.88
CLN8-206ENST00000523237 AGBL3Q8NEM8 1001 aa20.53■□□□□ 0.88
CLN8-206ENST00000523237 SSH1Q8WYL5 1049 aa20.53■□□□□ 0.88
CLN8-206ENST00000523237 ZNF804BA4D1E1 1349 aa20.53■□□□□ 0.88
CLN8-206ENST00000523237 RASSF10A6NK89 507 aa20.52■□□□□ 0.88
CLN8-206ENST00000523237 CCDC57Q2TAC2 916 aa20.52■□□□□ 0.88
CLN8-206ENST00000523237 DEFB115Q30KQ5 88 aa20.52■□□□□ 0.88
CLN8-206ENST00000523237 TBC1D10BQ4KMP7 808 aaPredicted RBP20.52■□□□□ 0.88
CLN8-206ENST00000523237 RSBN1LQ6PCB5 846 aaPredicted RBP20.52■□□□□ 0.88
CLN8-206ENST00000523237 CDC37L1Q7L3B6 337 aa20.52■□□□□ 0.88
CLN8-206ENST00000523237 USP17L3A6NCW0 530 aa20.51■□□□□ 0.87
CLN8-206ENST00000523237 USP17L4A6NCW7 530 aa20.51■□□□□ 0.87
CLN8-206ENST00000523237 HSPA1AP0DMV8 641 aaKnown RBP20.51■□□□□ 0.87
CLN8-206ENST00000523237 HSPA1BP0DMV9 641 aaKnown RBP20.51■□□□□ 0.87
CLN8-206ENST00000523237 KCNJ4P48050 445 aa20.51■□□□□ 0.87
CLN8-206ENST00000523237 VEGFBP49765 207 aa20.51■□□□□ 0.87
CLN8-206ENST00000523237 CHRNDQ07001 517 aa20.51■□□□□ 0.87
CLN8-206ENST00000523237 ALDH1L2Q3SY69 923 aa20.51■□□□□ 0.87
CLN8-206ENST00000523237 EPHA10Q5JZY3 1008 aa20.51■□□□□ 0.87
CLN8-206ENST00000523237 USP17L1Q7RTZ2 530 aa20.51■□□□□ 0.87
CLN8-206ENST00000523237 TRMT2AQ8IZ69 625 aaKnown RBP20.51■□□□□ 0.87
CLN8-206ENST00000523237 GLIS2Q9BZE0 524 aaPredicted RBP20.51■□□□□ 0.87
CLN8-206ENST00000523237 COA1Q9GZY4 146 aa20.51■□□□□ 0.87
CLN8-206ENST00000523237 POLR2AP24928 1970 aaKnown RBP20.51■□□□□ 0.87
CLN8-206ENST00000523237 EGFRP00533 1210 aa20.5■□□□□ 0.87
CLN8-206ENST00000523237 KIF4BQ2VIQ3 1234 aa20.5■□□□□ 0.87
CLN8-206ENST00000523237 TAF7LQ5H9L4 462 aa20.5■□□□□ 0.87
CLN8-206ENST00000523237 RBM26Q5T8P6 1007 aaKnown RBP20.5■□□□□ 0.87
CLN8-206ENST00000523237 CST9Q5W186 159 aa20.5■□□□□ 0.87
CLN8-206ENST00000523237 PCNTO95613 3336 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms