RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 SPINK5Q9NQ38 1064 aaPredicted RBP13.89□□□□□ -0.19
PVT1-216ENST00000523068 GGA1Q9UJY5 639 aa13.89□□□□□ -0.19
PVT1-216ENST00000523068 PSME4Q14997 1843 aa13.88□□□□□ -0.19
PVT1-216ENST00000523068 YDJCA8MPS7 323 aa13.88□□□□□ -0.19
PVT1-216ENST00000523068 G3V3G9 751 aa13.88□□□□□ -0.19
PVT1-216ENST00000523068 RIMBP2O15034 1052 aa13.88□□□□□ -0.19
PVT1-216ENST00000523068 UFL1O94874 794 aa13.88□□□□□ -0.19
PVT1-216ENST00000523068 GMPSP49915 693 aaPredicted RBP13.88□□□□□ -0.19
PVT1-216ENST00000523068 DCAF8Q5TAQ9 597 aa13.88□□□□□ -0.19
PVT1-216ENST00000523068 DBNDD1Q9H9R9 158 aa13.88□□□□□ -0.19
PVT1-216ENST00000523068 XDHP47989 1333 aa13.88□□□□□ -0.19
PVT1-216ENST00000523068 ECE2O60344 883 aa13.87□□□□□ -0.19
PVT1-216ENST00000523068 PLA2G12BQ9BX93 195 aa13.87□□□□□ -0.19
PVT1-216ENST00000523068 ZNF521Q96K83 1311 aa13.87□□□□□ -0.19
PVT1-216ENST00000523068 H7C1D1 291 aa13.86□□□□□ -0.19
PVT1-216ENST00000523068 RPS12P25398 132 aaKnown RBP13.86□□□□□ -0.19
PVT1-216ENST00000523068 DPF2Q92785 391 aa13.86□□□□□ -0.19
PVT1-216ENST00000523068 GREM2Q9H772 168 aa13.86□□□□□ -0.19
PVT1-216ENST00000523068 BSDC1Q9NW68 430 aaPredicted RBP13.86□□□□□ -0.19
PVT1-216ENST00000523068 CNOT7Q9UIV1 285 aaKnown RBP13.86□□□□□ -0.19
PVT1-216ENST00000523068 SCN9AQ15858 1988 aa13.85□□□□□ -0.19
PVT1-216ENST00000523068 CNTNAP1P78357 1384 aa13.85□□□□□ -0.19
PVT1-216ENST00000523068 PSMD14O00487 310 aa13.85□□□□□ -0.19
PVT1-216ENST00000523068 ATP2B4P23634 1241 aa13.85□□□□□ -0.19
PVT1-216ENST00000523068 IGHMBP2P38935 993 aaKnown RBP13.85□□□□□ -0.19
PVT1-216ENST00000523068 DOK7Q18PE1 504 aa13.85□□□□□ -0.19
PVT1-216ENST00000523068 ZC3H15Q8WU90 426 aaKnown RBP13.85□□□□□ -0.19
PVT1-216ENST00000523068 MKRN1Q9UHC7 482 aaKnown RBP13.85□□□□□ -0.19
PVT1-216ENST00000523068 PCNTO95613 3336 aa13.84□□□□□ -0.19
PVT1-216ENST00000523068 E9PSI1 815 aa13.84□□□□□ -0.19
PVT1-216ENST00000523068 F6X3S4 739 aa13.84□□□□□ -0.19
PVT1-216ENST00000523068 CASP7P55210 303 aa13.84□□□□□ -0.19
PVT1-216ENST00000523068 GPR101Q96P66 508 aaPredicted RBP13.84□□□□□ -0.19
PVT1-216ENST00000523068 ZBTB12Q9Y330 459 aaPredicted RBP13.84□□□□□ -0.19
PVT1-216ENST00000523068 CSF1RP07333 972 aa13.83□□□□□ -0.2
PVT1-216ENST00000523068 ITGA6P23229 1130 aa13.83□□□□□ -0.2
PVT1-216ENST00000523068 BEND3Q5T5X7 828 aa13.83□□□□□ -0.2
PVT1-216ENST00000523068 MICALL2Q8IY33 904 aa13.83□□□□□ -0.2
PVT1-216ENST00000523068 MPHOSPH8Q99549 860 aa13.83□□□□□ -0.2
PVT1-216ENST00000523068 PGAP2Q9UHJ9 254 aa13.83□□□□□ -0.2
PVT1-216ENST00000523068 MINPP1Q9UNW1 487 aa13.83□□□□□ -0.2
PVT1-216ENST00000523068 POLR2AP24928 1970 aaKnown RBP13.82□□□□□ -0.2
PVT1-216ENST00000523068 CCER2I3L3R5 266 aa13.82□□□□□ -0.2
PVT1-216ENST00000523068 VIL1P09327 827 aaKnown RBP13.82□□□□□ -0.2
PVT1-216ENST00000523068 DEFB115Q30KQ5 88 aa13.82□□□□□ -0.2
PVT1-216ENST00000523068 FAM161AQ3B820 660 aa13.82□□□□□ -0.2
PVT1-216ENST00000523068 PODNQ7Z5L7 613 aa13.82□□□□□ -0.2
PVT1-216ENST00000523068 ANKRD2Q9GZV1 360 aa13.82□□□□□ -0.2
PVT1-216ENST00000523068 ABT1Q9ULW3 272 aaKnown RBP13.82□□□□□ -0.2
PVT1-216ENST00000523068 MED23Q9ULK4 1368 aa13.82□□□□□ -0.2
PVT1-216ENST00000523068 A0A1B0GUL6 1792 aa13.81□□□□□ -0.2
PVT1-216ENST00000523068 ANKRD18BA2A2Z9 1011 aa13.81□□□□□ -0.2
PVT1-216ENST00000523068 RASSF10A6NK89 507 aa13.81□□□□□ -0.2
PVT1-216ENST00000523068 GRM8O00222 908 aa13.81□□□□□ -0.2
PVT1-216ENST00000523068 ALDH1L1O75891 902 aa13.81□□□□□ -0.2
PVT1-216ENST00000523068 CCT4P50991 539 aaKnown RBP13.81□□□□□ -0.2
PVT1-216ENST00000523068 IFIT5Q13325 482 aaKnown RBP13.81□□□□□ -0.2
PVT1-216ENST00000523068 MIER1Q8N108 512 aa13.81□□□□□ -0.2
PVT1-216ENST00000523068 SRCIN1Q9C0H9 1055 aa13.81□□□□□ -0.2
PVT1-216ENST00000523068 KCNQ5Q9NR82 932 aa13.81□□□□□ -0.2
PVT1-216ENST00000523068 C9orf78Q9NZ63 289 aaPredicted RBP13.81□□□□□ -0.2
PVT1-216ENST00000523068 LEMD3Q9Y2U8 911 aa13.81□□□□□ -0.2
PVT1-216ENST00000523068 ZNF609O15014 1411 aa13.81□□□□□ -0.2
PVT1-216ENST00000523068 HSPA1AP0DMV8 641 aaKnown RBP13.8□□□□□ -0.2
PVT1-216ENST00000523068 HSPA1BP0DMV9 641 aaKnown RBP13.8□□□□□ -0.2
PVT1-216ENST00000523068 HIRAP54198 1017 aaPredicted RBP13.8□□□□□ -0.2
PVT1-216ENST00000523068 SLC4A10Q6U841 1118 aa13.8□□□□□ -0.2
PVT1-216ENST00000523068 CDC37L1Q7L3B6 337 aa13.8□□□□□ -0.2
PVT1-216ENST00000523068 AGBL3Q8NEM8 1001 aa13.8□□□□□ -0.2
PVT1-216ENST00000523068 TRPM4Q8TD43 1214 aa13.8□□□□□ -0.2
PVT1-216ENST00000523068 CHMP3Q9Y3E7 222 aa13.8□□□□□ -0.2
PVT1-216ENST00000523068 TRAF5O00463 557 aa13.79□□□□□ -0.2
PVT1-216ENST00000523068 VEGFBP49765 207 aa13.79□□□□□ -0.2
PVT1-216ENST00000523068 FOXO4P98177 505 aa13.79□□□□□ -0.2
PVT1-216ENST00000523068 SLFN5Q08AF3 891 aa13.79□□□□□ -0.2
PVT1-216ENST00000523068 IFFO2Q5TF58 517 aa13.79□□□□□ -0.2
PVT1-216ENST00000523068 RSBN1LQ6PCB5 846 aaPredicted RBP13.79□□□□□ -0.2
PVT1-216ENST00000523068 SAMD7Q7Z3H4 446 aa13.79□□□□□ -0.2
PVT1-216ENST00000523068 PTPRCP08575 1304 aa13.79□□□□□ -0.2
PVT1-216ENST00000523068 ZNF646O15015 1829 aaPredicted RBP13.78□□□□□ -0.2
PVT1-216ENST00000523068 SHTN1A0MZ66 631 aa13.78□□□□□ -0.2
PVT1-216ENST00000523068 USP17L3A6NCW0 530 aa13.78□□□□□ -0.2
PVT1-216ENST00000523068 USP17L4A6NCW7 530 aa13.78□□□□□ -0.2
PVT1-216ENST00000523068 KCNJ4P48050 445 aa13.78□□□□□ -0.2
PVT1-216ENST00000523068 CCDC57Q2TAC2 916 aa13.78□□□□□ -0.2
PVT1-216ENST00000523068 TBC1D10BQ4KMP7 808 aaPredicted RBP13.78□□□□□ -0.2
PVT1-216ENST00000523068 CST9Q5W186 159 aa13.78□□□□□ -0.2
PVT1-216ENST00000523068 USP17L1Q7RTZ2 530 aa13.78□□□□□ -0.2
PVT1-216ENST00000523068 GLIS2Q9BZE0 524 aaPredicted RBP13.78□□□□□ -0.2
PVT1-216ENST00000523068 COA1Q9GZY4 146 aa13.78□□□□□ -0.2
PVT1-216ENST00000523068 ZNF804BA4D1E1 1349 aa13.78□□□□□ -0.2
PVT1-216ENST00000523068 CELF2O95319 508 aaKnown RBP13.77□□□□□ -0.21
PVT1-216ENST00000523068 ECE1P42892 770 aa13.77□□□□□ -0.21
PVT1-216ENST00000523068 FMR1Q06787 632 aaKnown RBP eCLIP13.77□□□□□ -0.21
PVT1-216ENST00000523068 CHRNDQ07001 517 aa13.77□□□□□ -0.21
PVT1-216ENST00000523068 KIF4BQ2VIQ3 1234 aa13.77□□□□□ -0.21
PVT1-216ENST00000523068 TAF7LQ5H9L4 462 aa13.77□□□□□ -0.21
PVT1-216ENST00000523068 RBM26Q5T8P6 1007 aaKnown RBP13.77□□□□□ -0.21
PVT1-216ENST00000523068 LMBR1LQ6UX01 489 aa13.77□□□□□ -0.21
PVT1-216ENST00000523068 MRPL50Q8N5N7 158 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms