RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 EMID1Q96A84 441 aaPredicted RBP10.74□□□□□ -0.69
VPS13B-210ENST00000521932 ZNF428Q96B54 188 aa10.74□□□□□ -0.69
VPS13B-210ENST00000521932 DDX21Q9NR30 783 aaKnown RBP eCLIP10.74□□□□□ -0.69
VPS13B-210ENST00000521932 DBF4Q9UBU7 674 aaPredicted RBP10.74□□□□□ -0.69
VPS13B-210ENST00000521932 MYH14Q7Z406 1995 aaKnown RBP10.74□□□□□ -0.69
VPS13B-210ENST00000521932 RNF223E7ERA6 249 aa10.73□□□□□ -0.69
VPS13B-210ENST00000521932 CD46P15529 392 aa10.73□□□□□ -0.69
VPS13B-210ENST00000521932 CANXP27824 592 aaKnown RBP10.73□□□□□ -0.69
VPS13B-210ENST00000521932 MORN1Q5T089 497 aa10.73□□□□□ -0.69
VPS13B-210ENST00000521932 TRAPPC3LQ5T215 181 aa10.73□□□□□ -0.69
VPS13B-210ENST00000521932 TMUB1Q9BVT8 246 aa10.73□□□□□ -0.69
VPS13B-210ENST00000521932 PRKD2Q9BZL6 878 aa10.73□□□□□ -0.69
VPS13B-210ENST00000521932 PNPLA7Q6ZV29 1317 aa10.73□□□□□ -0.69
VPS13B-210ENST00000521932 NR1I2O75469 434 aa10.72□□□□□ -0.69
VPS13B-210ENST00000521932 S1PR4O95977 384 aa10.72□□□□□ -0.69
VPS13B-210ENST00000521932 COL23A1Q86Y22 540 aaPredicted RBP10.72□□□□□ -0.69
VPS13B-210ENST00000521932 YTHDC1Q96MU7 727 aaKnown RBP10.72□□□□□ -0.69
VPS13B-210ENST00000521932 REPIN1Q9BWE0 567 aaKnown RBP10.72□□□□□ -0.69
VPS13B-210ENST00000521932 LAMB4A4D0S4 1761 aa10.72□□□□□ -0.69
VPS13B-210ENST00000521932 PPEF1O14829 653 aaPredicted RBP10.71□□□□□ -0.69
VPS13B-210ENST00000521932 ADH1BP00325 375 aa10.71□□□□□ -0.69
VPS13B-210ENST00000521932 PIP4K2AP48426 406 aaPredicted RBP10.71□□□□□ -0.69
VPS13B-210ENST00000521932 R3HDM1Q15032 1099 aaKnown RBP10.71□□□□□ -0.69
VPS13B-210ENST00000521932 UBR3Q6ZT12 1888 aa10.71□□□□□ -0.69
VPS13B-210ENST00000521932 SMIM5Q71RC9 77 aa10.71□□□□□ -0.69
VPS13B-210ENST00000521932 HYPKQ9NX55 129 aa10.71□□□□□ -0.69
VPS13B-210ENST00000521932 CHPF2Q9P2E5 772 aa10.71□□□□□ -0.69
VPS13B-210ENST00000521932 COL15A1P39059 1388 aa10.7□□□□□ -0.7
VPS13B-210ENST00000521932 A0A087WZG4 1122 aa10.7□□□□□ -0.7
VPS13B-210ENST00000521932 MYL6BP14649 208 aa10.7□□□□□ -0.7
VPS13B-210ENST00000521932 RFC4P35249 363 aa10.7□□□□□ -0.7
VPS13B-210ENST00000521932 PROSER3Q2NL68 480 aa10.7□□□□□ -0.7
VPS13B-210ENST00000521932 ALDH1L2Q3SY69 923 aa10.7□□□□□ -0.7
VPS13B-210ENST00000521932 NPM2Q86SE8 214 aaKnown RBP10.7□□□□□ -0.7
VPS13B-210ENST00000521932 SLC16A10Q8TF71 515 aa10.7□□□□□ -0.7
VPS13B-210ENST00000521932 THAP11Q96EK4 314 aa10.7□□□□□ -0.7
VPS13B-210ENST00000521932 QSER1Q2KHR3 1735 aa10.7□□□□□ -0.7
VPS13B-210ENST00000521932 ANXA1P04083 346 aa10.69□□□□□ -0.7
VPS13B-210ENST00000521932 ERICH6Q7L0X2 663 aa10.69□□□□□ -0.7
VPS13B-210ENST00000521932 COPS6Q7L5N1 327 aa10.69□□□□□ -0.7
VPS13B-210ENST00000521932 STK31Q9BXU1 1019 aa10.69□□□□□ -0.7
VPS13B-210ENST00000521932 PDGFDQ9GZP0 370 aaPredicted RBP10.69□□□□□ -0.7
VPS13B-210ENST00000521932 NARFQ9UHQ1 456 aa10.69□□□□□ -0.7
VPS13B-210ENST00000521932 SLC27A5Q9Y2P5 690 aa10.69□□□□□ -0.7
VPS13B-210ENST00000521932 USP42Q9H9J4 1324 aaKnown RBP10.68□□□□□ -0.7
VPS13B-210ENST00000521932 ERVV-1B6SEH8 477 aa10.68□□□□□ -0.7
VPS13B-210ENST00000521932 CAMTA2O94983 1202 aa10.68□□□□□ -0.7
VPS13B-210ENST00000521932 RARSP54136 660 aaKnown RBP10.68□□□□□ -0.7
VPS13B-210ENST00000521932 DZIP3Q86Y13 1208 aaKnown RBP10.68□□□□□ -0.7
VPS13B-210ENST00000521932 SSH1Q8WYL5 1049 aa10.68□□□□□ -0.7
VPS13B-210ENST00000521932 PHAXQ9H814 394 aaKnown RBP10.68□□□□□ -0.7
VPS13B-210ENST00000521932 TBC1D2BQ9UPU7 963 aa10.68□□□□□ -0.7
VPS13B-210ENST00000521932 TCERG1O14776 1098 aaKnown RBP10.67□□□□□ -0.7
VPS13B-210ENST00000521932 GYS1P13807 737 aa10.67□□□□□ -0.7
VPS13B-210ENST00000521932 GGCXP38435 758 aa10.67□□□□□ -0.7
VPS13B-210ENST00000521932 CLEC4GQ6UXB4 293 aa10.67□□□□□ -0.7
VPS13B-210ENST00000521932 TTLL7Q6ZT98 887 aa10.67□□□□□ -0.7
VPS13B-210ENST00000521932 XAGE3Q8WTP9 111 aa10.67□□□□□ -0.7
VPS13B-210ENST00000521932 GPCPD1Q9NPB8 672 aa10.67□□□□□ -0.7
VPS13B-210ENST00000521932 FAM217BQ9NTX9 383 aaPredicted RBP10.67□□□□□ -0.7
VPS13B-210ENST00000521932 ZNF330Q9Y3S2 320 aaPredicted RBP10.67□□□□□ -0.7
VPS13B-210ENST00000521932 V9GY48 417 aaPredicted RBP10.67□□□□□ -0.7
VPS13B-210ENST00000521932 TUBGCP6Q96RT7 1819 aa10.67□□□□□ -0.7
VPS13B-210ENST00000521932 MAP3K15Q6ZN16 1313 aa10.66□□□□□ -0.7
VPS13B-210ENST00000521932 AIMP1Q12904 312 aaKnown RBP10.66□□□□□ -0.7
VPS13B-210ENST00000521932 USPL1Q5W0Q7 1092 aa10.66□□□□□ -0.7
VPS13B-210ENST00000521932 G2E3Q7L622 706 aa10.66□□□□□ -0.7
VPS13B-210ENST00000521932 NLGN1Q8N2Q7 840 aa10.66□□□□□ -0.7
VPS13B-210ENST00000521932 PLBD2Q8NHP8 589 aa10.66□□□□□ -0.7
VPS13B-210ENST00000521932 HLA-CQ95604 372 aa10.66□□□□□ -0.7
VPS13B-210ENST00000521932 SPSB2Q99619 263 aa10.66□□□□□ -0.7
VPS13B-210ENST00000521932 MTFR1LQ9H019 292 aa10.66□□□□□ -0.7
VPS13B-210ENST00000521932 SRP68Q9UHB9 627 aaKnown RBP10.66□□□□□ -0.7
VPS13B-210ENST00000521932 FLIIQ13045 1269 aa10.65□□□□□ -0.7
VPS13B-210ENST00000521932 HLFQ16534 295 aa10.65□□□□□ -0.7
VPS13B-210ENST00000521932 PLA2G2CQ5R387 149 aa10.65□□□□□ -0.7
VPS13B-210ENST00000521932 KSR2Q6VAB6 950 aa10.65□□□□□ -0.7
VPS13B-210ENST00000521932 GIGYF2Q6Y7W6 1299 aaKnown RBP10.65□□□□□ -0.7
VPS13B-210ENST00000521932 KIF6Q6ZMV9 814 aa10.65□□□□□ -0.7
VPS13B-210ENST00000521932 FAM160A2Q8N612 972 aaPredicted RBP10.65□□□□□ -0.7
VPS13B-210ENST00000521932 ARXQ96QS3 562 aa10.65□□□□□ -0.7
VPS13B-210ENST00000521932 SLC6A16Q9GZN6 736 aa10.65□□□□□ -0.7
VPS13B-210ENST00000521932 CASZ1Q86V15 1759 aa10.65□□□□□ -0.71
VPS13B-210ENST00000521932 DDX58O95786 925 aaKnown RBP10.64□□□□□ -0.71
VPS13B-210ENST00000521932 TM4SF1P30408 202 aa10.64□□□□□ -0.71
VPS13B-210ENST00000521932 CLCN1P35523 988 aa10.64□□□□□ -0.71
VPS13B-210ENST00000521932 RNF19BQ6ZMZ0 732 aa10.64□□□□□ -0.71
VPS13B-210ENST00000521932 KRI1Q8N9T8 703 aaKnown RBP10.64□□□□□ -0.71
VPS13B-210ENST00000521932 ANKLE1Q8NAG6 615 aa10.64□□□□□ -0.71
VPS13B-210ENST00000521932 SMC4Q9NTJ3 1288 aa10.64□□□□□ -0.71
VPS13B-210ENST00000521932 ZNF652Q9Y2D9 606 aa10.64□□□□□ -0.71
VPS13B-210ENST00000521932 CACNA1FO60840 1977 aa10.64□□□□□ -0.71
VPS13B-210ENST00000521932 C4AP0C0L4 1744 aa10.64□□□□□ -0.71
VPS13B-210ENST00000521932 PTPRCP08575 1304 aa10.63□□□□□ -0.71
VPS13B-210ENST00000521932 PI4KAP2A4QPH2 592 aa10.63□□□□□ -0.71
VPS13B-210ENST00000521932 BCAR3O75815 825 aa10.63□□□□□ -0.71
VPS13B-210ENST00000521932 TCIRG1Q13488 830 aa10.63□□□□□ -0.71
VPS13B-210ENST00000521932 BRICD5Q6PL45 260 aa10.63□□□□□ -0.71
VPS13B-210ENST00000521932 RIC3Q7Z5B4 369 aa10.63□□□□□ -0.71
VPS13B-210ENST00000521932 ZNF34Q8IZ26 560 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms