RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 TCP11L1Q9NUJ3 509 aa18.64■□□□□ 0.58
USP42-207ENST00000521713 CCDC87Q9NVE4 849 aa18.64■□□□□ 0.58
USP42-207ENST00000521713 MAGI3Q5TCQ9 1506 aa18.64■□□□□ 0.57
USP42-207ENST00000521713 ERVV-2B6SEH9 535 aa18.64■□□□□ 0.57
USP42-207ENST00000521713 TNPO1Q92973 898 aaKnown RBP18.64■□□□□ 0.57
USP42-207ENST00000521713 ANAPC15P60006 121 aa18.64■□□□□ 0.57
USP42-207ENST00000521713 SCLT1Q96NL6 688 aa18.64■□□□□ 0.57
USP42-207ENST00000521713 PYM1Q9BRP8 204 aaKnown RBP18.64■□□□□ 0.57
USP42-207ENST00000521713 VAT1LQ9HCJ6 419 aa18.64■□□□□ 0.57
USP42-207ENST00000521713 MAGEB6P1A0A0J9YX57 407 aa18.64■□□□□ 0.57
USP42-207ENST00000521713 NPHP4O75161 1426 aaPredicted RBP18.63■□□□□ 0.57
USP42-207ENST00000521713 NF2P35240 595 aa18.63■□□□□ 0.57
USP42-207ENST00000521713 CCDC148Q8NFR7 591 aa18.63■□□□□ 0.57
USP42-207ENST00000521713 NBPF7P0C2Y1 421 aaPredicted RBP18.63■□□□□ 0.57
USP42-207ENST00000521713 DESP17661 470 aa18.63■□□□□ 0.57
USP42-207ENST00000521713 TIGD1Q96MW7 591 aa18.63■□□□□ 0.57
USP42-207ENST00000521713 TSG101Q99816 390 aa18.63■□□□□ 0.57
USP42-207ENST00000521713 CTAGE5O15320 804 aa18.63■□□□□ 0.57
USP42-207ENST00000521713 CAVIN2O95810 425 aa18.63■□□□□ 0.57
USP42-207ENST00000521713 MPNDQ8N594 471 aa18.63■□□□□ 0.57
USP42-207ENST00000521713 PAXBP1Q9Y5B6 917 aa18.63■□□□□ 0.57
USP42-207ENST00000521713 ZBTB43O43298 467 aa18.63■□□□□ 0.57
USP42-207ENST00000521713 EIF5P55010 431 aaKnown RBP18.62■□□□□ 0.57
USP42-207ENST00000521713 BMS1Q14692 1282 aaKnown RBP18.62■□□□□ 0.57
USP42-207ENST00000521713 DDX17Q92841 729 aaKnown RBP18.62■□□□□ 0.57
USP42-207ENST00000521713 ANO10Q9NW15 660 aa18.62■□□□□ 0.57
USP42-207ENST00000521713 PLXNC1O60486 1568 aa18.62■□□□□ 0.57
USP42-207ENST00000521713 FGFR1OPO95684 399 aaKnown RBP18.62■□□□□ 0.57
USP42-207ENST00000521713 ESYT1Q9BSJ8 1104 aa18.62■□□□□ 0.57
USP42-207ENST00000521713 RBM8AQ9Y5S9 174 aaKnown RBP18.62■□□□□ 0.57
USP42-207ENST00000521713 GSDMDP57764 484 aa18.62■□□□□ 0.57
USP42-207ENST00000521713 HS1BP3Q53T59 392 aa18.62■□□□□ 0.57
USP42-207ENST00000521713 IFIT1BQ5T764 474 aaKnown RBP18.62■□□□□ 0.57
USP42-207ENST00000521713 HELBQ8NG08 1087 aaPredicted RBP18.62■□□□□ 0.57
USP42-207ENST00000521713 KDM5DQ9BY66 1539 aa18.62■□□□□ 0.57
USP42-207ENST00000521713 KLF18A0A0U1RQI7 1052 aa18.62■□□□□ 0.57
USP42-207ENST00000521713 LDHBP07195 334 aaKnown RBP18.62■□□□□ 0.57
USP42-207ENST00000521713 MICALCLQ6ZW33 695 aa18.62■□□□□ 0.57
USP42-207ENST00000521713 BRF1Q92994 677 aa18.62■□□□□ 0.57
USP42-207ENST00000521713 SLC26A6Q9BXS9 759 aa18.62■□□□□ 0.57
USP42-207ENST00000521713 GTPBP4Q9BZE4 634 aaKnown RBP18.62■□□□□ 0.57
USP42-207ENST00000521713 LGR6Q9HBX8 967 aa18.62■□□□□ 0.57
USP42-207ENST00000521713 RNF113AO15541 343 aaKnown RBP18.61■□□□□ 0.57
USP42-207ENST00000521713 TNNT1P13805 278 aa18.61■□□□□ 0.57
USP42-207ENST00000521713 ARHGAP29Q52LW3 1261 aa18.61■□□□□ 0.57
USP42-207ENST00000521713 ZBTB40Q9NUA8 1239 aa18.61■□□□□ 0.57
USP42-207ENST00000521713 PDE8AO60658 829 aa18.61■□□□□ 0.57
USP42-207ENST00000521713 FAM89AQ96GI7 184 aa18.61■□□□□ 0.57
USP42-207ENST00000521713 CALML4Q96GE6 196 aa18.61■□□□□ 0.57
USP42-207ENST00000521713 BICC1Q9H694 974 aaKnown RBP18.61■□□□□ 0.57
USP42-207ENST00000521713 DENND2AQ9ULE3 1009 aa18.61■□□□□ 0.57
USP42-207ENST00000521713 EYA2O00167 538 aa18.61■□□□□ 0.57
USP42-207ENST00000521713 GJB2P29033 226 aa18.61■□□□□ 0.57
USP42-207ENST00000521713 SKAP1Q86WV1 359 aa18.61■□□□□ 0.57
USP42-207ENST00000521713 EPB41L2O43491 1005 aaKnown RBP18.6■□□□□ 0.57
USP42-207ENST00000521713 AMPD3Q01432 767 aa18.6■□□□□ 0.57
USP42-207ENST00000521713 TFCP2Q12800 502 aa18.6■□□□□ 0.57
USP42-207ENST00000521713 RBM27Q9P2N5 1060 aaKnown RBP18.6■□□□□ 0.57
USP42-207ENST00000521713 STX6O43752 255 aa18.6■□□□□ 0.57
USP42-207ENST00000521713 CCDC144CPQ8IYA2 1237 aa18.6■□□□□ 0.57
USP42-207ENST00000521713 NLRP1Q9C000 1473 aa18.6■□□□□ 0.57
USP42-207ENST00000521713 ADGBQ8N7X0 1667 aa18.6■□□□□ 0.57
USP42-207ENST00000521713 POTEJP0CG39 1038 aa18.59■□□□□ 0.57
USP42-207ENST00000521713 DNAJC10Q8IXB1 793 aa18.59■□□□□ 0.57
USP42-207ENST00000521713 PLCD4Q9BRC7 762 aa18.59■□□□□ 0.57
USP42-207ENST00000521713 BMP15O95972 392 aa18.59■□□□□ 0.57
USP42-207ENST00000521713 UBA7P41226 1012 aa18.59■□□□□ 0.57
USP42-207ENST00000521713 PICALMQ13492 652 aa18.59■□□□□ 0.57
USP42-207ENST00000521713 CLEC11AQ9Y240 323 aa18.59■□□□□ 0.57
USP42-207ENST00000521713 GOLGA6L9A6NEM1 432 aa18.59■□□□□ 0.57
USP42-207ENST00000521713 BAG6P46379 1132 aa18.59■□□□□ 0.57
USP42-207ENST00000521713 SAMD9LQ8IVG5 1584 aa18.58■□□□□ 0.57
USP42-207ENST00000521713 RTN1Q16799 776 aa18.58■□□□□ 0.57
USP42-207ENST00000521713 SLC4A8Q2Y0W8 1093 aa18.58■□□□□ 0.57
USP42-207ENST00000521713 ZSCAN16Q9H4T2 348 aaPredicted RBP18.58■□□□□ 0.57
USP42-207ENST00000521713 CALM1P0DP23 149 aa18.58■□□□□ 0.57
USP42-207ENST00000521713 CALM2P0DP24 149 aa18.58■□□□□ 0.57
USP42-207ENST00000521713 CALM3P0DP25 149 aa18.58■□□□□ 0.57
USP42-207ENST00000521713 FAM177A1Q8N128 213 aaPredicted RBP18.58■□□□□ 0.57
USP42-207ENST00000521713 CNNM3Q8NE01 707 aa18.58■□□□□ 0.57
USP42-207ENST00000521713 ZNF397Q8NF99 534 aaPredicted RBP18.58■□□□□ 0.57
USP42-207ENST00000521713 RAD50Q92878 1312 aa18.58■□□□□ 0.56
USP42-207ENST00000521713 A1BGP04217 495 aa18.58■□□□□ 0.56
USP42-207ENST00000521713 CFAP100Q494V2 611 aa18.58■□□□□ 0.56
USP42-207ENST00000521713 JAKMIP3Q5VZ66 844 aa18.58■□□□□ 0.56
USP42-207ENST00000521713 TBC1D32Q96NH3 1257 aa18.58■□□□□ 0.56
USP42-207ENST00000521713 DDX19AQ9NUU7 478 aaKnown RBP18.58■□□□□ 0.56
USP42-207ENST00000521713 RBM25P49756 843 aaKnown RBP18.58■□□□□ 0.56
USP42-207ENST00000521713 KRT222Q8N1A0 295 aa18.58■□□□□ 0.56
USP42-207ENST00000521713 LRRC27Q9C0I9 530 aa18.58■□□□□ 0.56
USP42-207ENST00000521713 VEZTQ9HBM0 779 aa18.58■□□□□ 0.56
USP42-207ENST00000521713 FKBP15Q5T1M5 1219 aa18.57■□□□□ 0.56
USP42-207ENST00000521713 ZNF496Q96IT1 587 aaPredicted RBP18.57■□□□□ 0.56
USP42-207ENST00000521713 UGGT1Q9NYU2 1555 aa18.57■□□□□ 0.56
USP42-207ENST00000521713 ITGA6P23229 1130 aa18.57■□□□□ 0.56
USP42-207ENST00000521713 CHMP4BP1P59074 171 aa18.57■□□□□ 0.56
USP42-207ENST00000521713 MCM9Q9NXL9 1143 aa18.57■□□□□ 0.56
USP42-207ENST00000521713 CLIP2Q9UDT6 1046 aa18.57■□□□□ 0.56
USP42-207ENST00000521713 RIMBP2O15034 1052 aa18.57■□□□□ 0.56
USP42-207ENST00000521713 TNNI2P48788 182 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms