RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, human

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPS28-208	ENST00000521605	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.87	□□□□□ -0.19
MRPS28-208	ENST00000521605	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.86	□□□□□ -0.19
MRPS28-208	ENST00000521605	MYL6B	P14649	208 aa		13.86	□□□□□ -0.19
MRPS28-208	ENST00000521605	RIPK4	P57078	832 aa		13.86	□□□□□ -0.19
MRPS28-208	ENST00000521605	PKN2	Q16513	984 aa	Known RBP	13.86	□□□□□ -0.19
MRPS28-208	ENST00000521605	MIS18A	Q9NYP9	233 aa		13.86	□□□□□ -0.19
MRPS28-208	ENST00000521605	LAMB4	A4D0S4	1761 aa		13.86	□□□□□ -0.19
MRPS28-208	ENST00000521605	PDE3A	Q14432	1141 aa		13.85	□□□□□ -0.19
MRPS28-208	ENST00000521605	RASAL3	Q86YV0	1011 aa		13.85	□□□□□ -0.19
MRPS28-208	ENST00000521605	POLR2A	P24928	1970 aa	Known RBP	13.84	□□□□□ -0.19
MRPS28-208	ENST00000521605	PSMD14	O00487	310 aa		13.84	□□□□□ -0.19
MRPS28-208	ENST00000521605	SULF1	Q8IWU6	871 aa		13.84	□□□□□ -0.19
MRPS28-208	ENST00000521605	SP8	Q8IXZ3	490 aa		13.84	□□□□□ -0.19
MRPS28-208	ENST00000521605	CDCA5	Q96FF9	252 aa		13.84	□□□□□ -0.19
MRPS28-208	ENST00000521605	DBNDD1	Q9H9R9	158 aa		13.84	□□□□□ -0.19
MRPS28-208	ENST00000521605	IFT57	Q9NWB7	429 aa		13.84	□□□□□ -0.19
MRPS28-208	ENST00000521605	HTATSF1	O43719	755 aa	Known RBP	13.83	□□□□□ -0.2
MRPS28-208	ENST00000521605	FXR1	P51114	621 aa	Known RBP eCLIP	13.83	□□□□□ -0.2
MRPS28-208	ENST00000521605	PPP1R42	Q7Z4L9	355 aa		13.83	□□□□□ -0.2
MRPS28-208	ENST00000521605	ZNF34	Q8IZ26	560 aa		13.83	□□□□□ -0.2
MRPS28-208	ENST00000521605	DPF2	Q92785	391 aa		13.83	□□□□□ -0.2
MRPS28-208	ENST00000521605	GGA3	Q9NZ52	723 aa		13.83	□□□□□ -0.2
MRPS28-208	ENST00000521605	ASTN2	O75129	1339 aa	Predicted RBP	13.83	□□□□□ -0.2
MRPS28-208	ENST00000521605	RIMBP2	O15034	1052 aa		13.82	□□□□□ -0.2
MRPS28-208	ENST00000521605	BBOX1	O75936	387 aa		13.82	□□□□□ -0.2
MRPS28-208	ENST00000521605	ZNF853	P0CG23	659 aa		13.82	□□□□□ -0.2
MRPS28-208	ENST00000521605	GNAI1	P63096	354 aa		13.82	□□□□□ -0.2
MRPS28-208	ENST00000521605	NEUROD2	Q15784	382 aa		13.82	□□□□□ -0.2
MRPS28-208	ENST00000521605	KIF4B	Q2VIQ3	1234 aa		13.82	□□□□□ -0.2
MRPS28-208	ENST00000521605	FBXO46	Q6PJ61	603 aa	Predicted RBP	13.82	□□□□□ -0.2
MRPS28-208	ENST00000521605	REM2	Q8IYK8	340 aa	Predicted RBP	13.82	□□□□□ -0.2
MRPS28-208	ENST00000521605	DUOX1	Q9NRD9	1551 aa		13.82	□□□□□ -0.2
MRPS28-208	ENST00000521605	FANCI	Q9NVI1	1328 aa		13.82	□□□□□ -0.2
MRPS28-208	ENST00000521605	MKI67	P46013	3256 aa	Known RBP	13.81	□□□□□ -0.2
MRPS28-208	ENST00000521605	MS4A1	P11836	297 aa		13.81	□□□□□ -0.2
MRPS28-208	ENST00000521605	HCLS1	P14317	486 aa	Predicted RBP	13.81	□□□□□ -0.2
MRPS28-208	ENST00000521605	RARS	P54136	660 aa	Known RBP	13.81	□□□□□ -0.2
MRPS28-208	ENST00000521605	IRX6	P78412	446 aa	Predicted RBP	13.81	□□□□□ -0.2
MRPS28-208	ENST00000521605	UTP14A	Q9BVJ6	771 aa	Known RBP	13.81	□□□□□ -0.2
MRPS28-208	ENST00000521605	KCNQ5	Q9NR82	932 aa		13.81	□□□□□ -0.2
MRPS28-208	ENST00000521605	LAMB2	P55268	1798 aa		13.81	□□□□□ -0.2
MRPS28-208	ENST00000521605	GPR25	O00155	361 aa		13.8	□□□□□ -0.2
MRPS28-208	ENST00000521605	MKRN3	Q13064	507 aa	Known RBP	13.8	□□□□□ -0.2
MRPS28-208	ENST00000521605	TAF7	Q15545	349 aa	Predicted RBP	13.8	□□□□□ -0.2
MRPS28-208	ENST00000521605	WASHC4	Q2M389	1173 aa		13.8	□□□□□ -0.2
MRPS28-208	ENST00000521605	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.8	□□□□□ -0.2
MRPS28-208	ENST00000521605	MOB2	Q70IA6	237 aa		13.8	□□□□□ -0.2
MRPS28-208	ENST00000521605	DDX46	Q7L014	1031 aa	Known RBP	13.8	□□□□□ -0.2
MRPS28-208	ENST00000521605	TAF1	P21675	1872 aa		13.79	□□□□□ -0.2
MRPS28-208	ENST00000521605	POTEF	A5A3E0	1075 aa		13.79	□□□□□ -0.2
MRPS28-208	ENST00000521605	DOK7	Q18PE1	504 aa		13.79	□□□□□ -0.2
MRPS28-208	ENST00000521605	ALDH1L2	Q3SY69	923 aa		13.79	□□□□□ -0.2
MRPS28-208	ENST00000521605	PARP10	Q53GL7	1025 aa		13.79	□□□□□ -0.2
MRPS28-208	ENST00000521605	SLC10A5	Q5PT55	438 aa		13.79	□□□□□ -0.2
MRPS28-208	ENST00000521605	SCAF8	Q9UPN6	1271 aa	Known RBP	13.79	□□□□□ -0.2
MRPS28-208	ENST00000521605	C6orf229	H3BNL8	230 aa		13.78	□□□□□ -0.2
MRPS28-208	ENST00000521605	ECE2	O60344	883 aa		13.78	□□□□□ -0.2
MRPS28-208	ENST00000521605	RPS12	P25398	132 aa	Known RBP	13.78	□□□□□ -0.2
MRPS28-208	ENST00000521605	GRAP	Q13588	217 aa		13.78	□□□□□ -0.2
MRPS28-208	ENST00000521605	ANGEL2	Q5VTE6	544 aa	Known RBP	13.78	□□□□□ -0.2
MRPS28-208	ENST00000521605	GRAPL	Q8TC17	118 aa	Predicted RBP	13.78	□□□□□ -0.2
MRPS28-208	ENST00000521605	THUMPD2	Q9BTF0	503 aa	Known RBP	13.78	□□□□□ -0.2
MRPS28-208	ENST00000521605	BABAM1	Q9NWV8	329 aa		13.78	□□□□□ -0.2
MRPS28-208	ENST00000521605	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.78	□□□□□ -0.2
MRPS28-208	ENST00000521605	RTL9	Q8NET4	1388 aa		13.78	□□□□□ -0.2
MRPS28-208	ENST00000521605	UBE2Q2L	H0YL09	131 aa		13.77	□□□□□ -0.21
MRPS28-208	ENST00000521605	FKTN	O75072	461 aa		13.77	□□□□□ -0.21
MRPS28-208	ENST00000521605	CCDC136	Q96JN2	1154 aa		13.77	□□□□□ -0.21
MRPS28-208	ENST00000521605	PAPPA2	Q9BXP8	1791 aa		13.76	□□□□□ -0.21
MRPS28-208	ENST00000521605	SCARF1	Q14162	830 aa		13.76	□□□□□ -0.21
MRPS28-208	ENST00000521605	TTLL12	Q14166	644 aa	Predicted RBP	13.76	□□□□□ -0.21
MRPS28-208	ENST00000521605	R3HDML	Q9H3Y0	253 aa		13.76	□□□□□ -0.21
MRPS28-208	ENST00000521605	DLG5	Q8TDM6	1919 aa		13.76	□□□□□ -0.21
MRPS28-208	ENST00000521605	ANKRD36C	Q5JPF3	1778 aa		13.76	□□□□□ -0.21
MRPS28-208	ENST00000521605	FKBP1B	P68106	108 aa		13.75	□□□□□ -0.21
MRPS28-208	ENST00000521605	PRAMEF18	Q5VWM3	479 aa		13.75	□□□□□ -0.21
MRPS28-208	ENST00000521605	EXOC6	Q8TAG9	804 aa		13.75	□□□□□ -0.21
MRPS28-208	ENST00000521605	COLQ	Q9Y215	455 aa	Predicted RBP	13.75	□□□□□ -0.21
MRPS28-208	ENST00000521605	LRRC37A	A6NMS7	1700 aa		13.75	□□□□□ -0.21
MRPS28-208	ENST00000521605	KDM3B	Q7LBC6	1761 aa		13.74	□□□□□ -0.21
MRPS28-208	ENST00000521605	KIF16B	Q96L93	1317 aa		13.74	□□□□□ -0.21
MRPS28-208	ENST00000521605	EIF4A1	P60842	406 aa	Known RBP	13.74	□□□□□ -0.21
MRPS28-208	ENST00000521605	GPSM2	P81274	684 aa		13.74	□□□□□ -0.21
MRPS28-208	ENST00000521605	EXOSC9	Q06265	439 aa	Known RBP	13.74	□□□□□ -0.21
MRPS28-208	ENST00000521605	POLL	Q9UGP5	575 aa		13.74	□□□□□ -0.21
MRPS28-208	ENST00000521605	TRMT112	Q9UI30	125 aa	Known RBP	13.74	□□□□□ -0.21
MRPS28-208	ENST00000521605	TRIM17	Q9Y577	477 aa		13.74	□□□□□ -0.21
MRPS28-208	ENST00000521605	HTT	P42858	3142 aa		13.74	□□□□□ -0.21
MRPS28-208	ENST00000521605	CENPF	P49454	3210 aa		13.73	□□□□□ -0.21
MRPS28-208	ENST00000521605	DDX60	Q8IY21	1712 aa	Known RBP	13.73	□□□□□ -0.21
MRPS28-208	ENST00000521605	CHL1	O00533	1208 aa		13.73	□□□□□ -0.21
MRPS28-208	ENST00000521605	BCAR3	O75815	825 aa		13.73	□□□□□ -0.21
MRPS28-208	ENST00000521605	ANXA1	P04083	346 aa		13.73	□□□□□ -0.21
MRPS28-208	ENST00000521605	TM4SF4	P48230	202 aa		13.73	□□□□□ -0.21
MRPS28-208	ENST00000521605	ARHGAP45	Q92619	1136 aa		13.73	□□□□□ -0.21
MRPS28-208	ENST00000521605	CELF1	Q92879	486 aa	Known RBP	13.73	□□□□□ -0.21
MRPS28-208	ENST00000521605	CRBN	Q96SW2	442 aa		13.73	□□□□□ -0.21
MRPS28-208	ENST00000521605	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.73	□□□□□ -0.21
MRPS28-208	ENST00000521605		G3V3G9	751 aa		13.72	□□□□□ -0.21
MRPS28-208	ENST00000521605	DLL1	O00548	723 aa		13.72	□□□□□ -0.21

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