RNA–Protein interactions for RNA: ENST00000521589.5

NPIPB3-205, Transcript of nuclear pore complex interacting protein family member B3, human

TSL 3

Gene NPIPB3, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB3-205	ENST00000521589	DPF2	Q92785	391 aa		11.22	□□□□□ -0.61
NPIPB3-205	ENST00000521589	CDC5L	Q99459	802 aa	Known RBP	11.22	□□□□□ -0.61
NPIPB3-205	ENST00000521589	SALL2	Q9Y467	1007 aa	Predicted RBP	11.22	□□□□□ -0.61
NPIPB3-205	ENST00000521589	MYH3	P11055	1940 aa		11.21	□□□□□ -0.61
NPIPB3-205	ENST00000521589	XDH	P47989	1333 aa		11.21	□□□□□ -0.61
NPIPB3-205	ENST00000521589	RASSF10	A6NK89	507 aa		11.21	□□□□□ -0.61
NPIPB3-205	ENST00000521589	PSMD14	O00487	310 aa		11.21	□□□□□ -0.61
NPIPB3-205	ENST00000521589	ECE2	O60344	883 aa		11.21	□□□□□ -0.61
NPIPB3-205	ENST00000521589	UFL1	O94874	794 aa		11.21	□□□□□ -0.61
NPIPB3-205	ENST00000521589	RPS12	P25398	132 aa	Known RBP	11.21	□□□□□ -0.61
NPIPB3-205	ENST00000521589	UBE3B	Q7Z3V4	1068 aa		11.21	□□□□□ -0.61
NPIPB3-205	ENST00000521589	BCL2L13	Q9BXK5	485 aa		11.21	□□□□□ -0.61
NPIPB3-205	ENST00000521589	GREM2	Q9H772	168 aa		11.21	□□□□□ -0.61
NPIPB3-205	ENST00000521589	DBNDD1	Q9H9R9	158 aa		11.21	□□□□□ -0.61
NPIPB3-205	ENST00000521589	BSDC1	Q9NW68	430 aa	Predicted RBP	11.21	□□□□□ -0.61
NPIPB3-205	ENST00000521589	ANKIB1	Q9P2G1	1089 aa		11.21	□□□□□ -0.61
NPIPB3-205	ENST00000521589	MKRN1	Q9UHC7	482 aa	Known RBP	11.21	□□□□□ -0.61
NPIPB3-205	ENST00000521589	GGA1	Q9UJY5	639 aa		11.21	□□□□□ -0.61
NPIPB3-205	ENST00000521589	CSF1R	P07333	972 aa		11.2	□□□□□ -0.62
NPIPB3-205	ENST00000521589	HIRA	P54198	1017 aa	Predicted RBP	11.2	□□□□□ -0.62
NPIPB3-205	ENST00000521589	GPR101	Q96P66	508 aa	Predicted RBP	11.2	□□□□□ -0.62
NPIPB3-205	ENST00000521589	CCDC85A	Q96PX6	553 aa	Predicted RBP	11.2	□□□□□ -0.62
NPIPB3-205	ENST00000521589	ZC3H12C	Q9C0D7	883 aa	Known RBP	11.2	□□□□□ -0.62
NPIPB3-205	ENST00000521589	CNOT7	Q9UIV1	285 aa	Known RBP	11.2	□□□□□ -0.62
NPIPB3-205	ENST00000521589	SCN9A	Q15858	1988 aa		11.19	□□□□□ -0.62
NPIPB3-205	ENST00000521589		H7C1D1	291 aa		11.19	□□□□□ -0.62
NPIPB3-205	ENST00000521589	RIMBP2	O15034	1052 aa		11.19	□□□□□ -0.62
NPIPB3-205	ENST00000521589	VIL1	P09327	827 aa	Known RBP	11.19	□□□□□ -0.62
NPIPB3-205	ENST00000521589	HSPA1A	P0DMV8	641 aa	Known RBP	11.19	□□□□□ -0.62
NPIPB3-205	ENST00000521589	HSPA1B	P0DMV9	641 aa	Known RBP	11.19	□□□□□ -0.62
NPIPB3-205	ENST00000521589	ATP2B4	P23634	1241 aa		11.19	□□□□□ -0.62
NPIPB3-205	ENST00000521589	BEND3	Q5T5X7	828 aa		11.19	□□□□□ -0.62
NPIPB3-205	ENST00000521589	MICALL2	Q8IY33	904 aa		11.19	□□□□□ -0.62
NPIPB3-205	ENST00000521589	TRPM4	Q8TD43	1214 aa		11.19	□□□□□ -0.62
NPIPB3-205	ENST00000521589	MINPP1	Q9UNW1	487 aa		11.19	□□□□□ -0.62
NPIPB3-205	ENST00000521589	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.19	□□□□□ -0.62
NPIPB3-205	ENST00000521589	MED23	Q9ULK4	1368 aa		11.18	□□□□□ -0.62
NPIPB3-205	ENST00000521589	SHTN1	A0MZ66	631 aa		11.18	□□□□□ -0.62
NPIPB3-205	ENST00000521589	TRAF5	O00463	557 aa		11.18	□□□□□ -0.62
NPIPB3-205	ENST00000521589	VEGFB	P49765	207 aa		11.18	□□□□□ -0.62
NPIPB3-205	ENST00000521589	DOK7	Q18PE1	504 aa		11.18	□□□□□ -0.62
NPIPB3-205	ENST00000521589	FAM161A	Q3B820	660 aa		11.18	□□□□□ -0.62
NPIPB3-205	ENST00000521589	CST9	Q5W186	159 aa		11.18	□□□□□ -0.62
NPIPB3-205	ENST00000521589	KCNQ5	Q9NR82	932 aa		11.18	□□□□□ -0.62
NPIPB3-205	ENST00000521589	TRPM7	Q96QT4	1865 aa		11.17	□□□□□ -0.62
NPIPB3-205	ENST00000521589	PSME4	Q14997	1843 aa		11.17	□□□□□ -0.62
NPIPB3-205	ENST00000521589		F6X3S4	739 aa		11.17	□□□□□ -0.62
NPIPB3-205	ENST00000521589	ITGA6	P23229	1130 aa		11.17	□□□□□ -0.62
NPIPB3-205	ENST00000521589	FMR1	Q06787	632 aa	Known RBP eCLIP	11.17	□□□□□ -0.62
NPIPB3-205	ENST00000521589	DEFB115	Q30KQ5	88 aa		11.17	□□□□□ -0.62
NPIPB3-205	ENST00000521589	PODN	Q7Z5L7	613 aa		11.17	□□□□□ -0.62
NPIPB3-205	ENST00000521589	EGFR	P00533	1210 aa		11.16	□□□□□ -0.62
NPIPB3-205	ENST00000521589	IGHMBP2	P38935	993 aa	Known RBP	11.16	□□□□□ -0.62
NPIPB3-205	ENST00000521589	CCT4	P50991	539 aa	Known RBP	11.16	□□□□□ -0.62
NPIPB3-205	ENST00000521589	ZNF280A	P59817	542 aa	Predicted RBP	11.16	□□□□□ -0.62
NPIPB3-205	ENST00000521589	COL13A1	Q5TAT6	717 aa	Predicted RBP	11.16	□□□□□ -0.62
NPIPB3-205	ENST00000521589	CDC37L1	Q7L3B6	337 aa		11.16	□□□□□ -0.62
NPIPB3-205	ENST00000521589	SAMD7	Q7Z3H4	446 aa		11.16	□□□□□ -0.62
NPIPB3-205	ENST00000521589	AGBL3	Q8NEM8	1001 aa		11.16	□□□□□ -0.62
NPIPB3-205	ENST00000521589	GML	Q99445	158 aa		11.16	□□□□□ -0.62
NPIPB3-205	ENST00000521589	GLIS2	Q9BZE0	524 aa	Predicted RBP	11.16	□□□□□ -0.62
NPIPB3-205	ENST00000521589	ABT1	Q9ULW3	272 aa	Known RBP	11.16	□□□□□ -0.62
NPIPB3-205	ENST00000521589	LEMD3	Q9Y2U8	911 aa		11.16	□□□□□ -0.62
NPIPB3-205	ENST00000521589	TLL2	Q9Y6L7	1015 aa		11.16	□□□□□ -0.62
NPIPB3-205	ENST00000521589	THSD7B	Q9C0I4	1608 aa		11.16	□□□□□ -0.62
NPIPB3-205	ENST00000521589	WTIP	A6NIX2	430 aa	Predicted RBP	11.15	□□□□□ -0.62
NPIPB3-205	ENST00000521589		E9PSI1	815 aa		11.15	□□□□□ -0.62
NPIPB3-205	ENST00000521589		G3V3G9	751 aa		11.15	□□□□□ -0.62
NPIPB3-205	ENST00000521589	GRM8	O00222	908 aa		11.15	□□□□□ -0.62
NPIPB3-205	ENST00000521589	ALDH1L1	O75891	902 aa		11.15	□□□□□ -0.62
NPIPB3-205	ENST00000521589	FOXO4	P98177	505 aa		11.15	□□□□□ -0.62
NPIPB3-205	ENST00000521589	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	11.15	□□□□□ -0.62
NPIPB3-205	ENST00000521589	DCAF8	Q5TAQ9	597 aa		11.15	□□□□□ -0.62
NPIPB3-205	ENST00000521589	RSBN1L	Q6PCB5	846 aa	Predicted RBP	11.15	□□□□□ -0.62
NPIPB3-205	ENST00000521589	HHIPL1	Q96JK4	782 aa		11.15	□□□□□ -0.62
NPIPB3-205	ENST00000521589	ANKRD2	Q9GZV1	360 aa		11.15	□□□□□ -0.62
NPIPB3-205	ENST00000521589	SPEF2	Q9C093	1822 aa		11.14	□□□□□ -0.63
NPIPB3-205	ENST00000521589	WDR33	Q9C0J8	1336 aa	Known RBP	11.14	□□□□□ -0.63
NPIPB3-205	ENST00000521589	USP17L3	A6NCW0	530 aa		11.14	□□□□□ -0.63
NPIPB3-205	ENST00000521589	USP17L4	A6NCW7	530 aa		11.14	□□□□□ -0.63
NPIPB3-205	ENST00000521589	CELF2	O95319	508 aa	Known RBP	11.14	□□□□□ -0.63
NPIPB3-205	ENST00000521589	ECE1	P42892	770 aa		11.14	□□□□□ -0.63
NPIPB3-205	ENST00000521589	KIF4B	Q2VIQ3	1234 aa		11.14	□□□□□ -0.63
NPIPB3-205	ENST00000521589	USP17L1	Q7RTZ2	530 aa		11.14	□□□□□ -0.63
NPIPB3-205	ENST00000521589	SAPCD2	Q86UD0	394 aa		11.14	□□□□□ -0.63
NPIPB3-205	ENST00000521589	MPHOSPH8	Q99549	860 aa		11.14	□□□□□ -0.63
NPIPB3-205	ENST00000521589	COA1	Q9GZY4	146 aa		11.14	□□□□□ -0.63
NPIPB3-205	ENST00000521589	WBP1L	Q9NX94	342 aa		11.14	□□□□□ -0.63
NPIPB3-205	ENST00000521589	ZNF804B	A4D1E1	1349 aa		11.13	□□□□□ -0.63
NPIPB3-205	ENST00000521589	IRS2	Q9Y4H2	1338 aa		11.13	□□□□□ -0.63
NPIPB3-205	ENST00000521589	ANKRD18B	A2A2Z9	1011 aa		11.13	□□□□□ -0.63
NPIPB3-205	ENST00000521589	CCER2	I3L3R5	266 aa		11.13	□□□□□ -0.63
NPIPB3-205	ENST00000521589	FOXN1	O15353	648 aa		11.13	□□□□□ -0.63
NPIPB3-205	ENST00000521589	SLFN5	Q08AF3	891 aa		11.13	□□□□□ -0.63
NPIPB3-205	ENST00000521589	IFIT5	Q13325	482 aa	Known RBP	11.13	□□□□□ -0.63
NPIPB3-205	ENST00000521589	EPHA10	Q5JZY3	1008 aa		11.13	□□□□□ -0.63
NPIPB3-205	ENST00000521589	DACT2	Q5SW24	774 aa		11.13	□□□□□ -0.63
NPIPB3-205	ENST00000521589	C15orf52	Q6ZUT6	534 aa	Known RBP	11.13	□□□□□ -0.63
NPIPB3-205	ENST00000521589	CAPNS2	Q96L46	248 aa		11.13	□□□□□ -0.63
NPIPB3-205	ENST00000521589	UTY	O14607	1347 aa		11.12	□□□□□ -0.63

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