RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 TTC39BQ5VTQ0 682 aaPredicted RBP11.05□□□□□ -0.64
NUDCD1-204ENST00000521439 KRT25Q7Z3Z0 450 aa11.05□□□□□ -0.64
NUDCD1-204ENST00000521439 MRRFQ96E11 262 aaKnown RBP11.05□□□□□ -0.64
NUDCD1-204ENST00000521439 PNMA5Q96PV4 448 aa11.05□□□□□ -0.64
NUDCD1-204ENST00000521439 PHF20L1A8MW92 1017 aa11.04□□□□□ -0.64
NUDCD1-204ENST00000521439 RAB44Q7Z6P3 723 aaPredicted RBP11.04□□□□□ -0.64
NUDCD1-204ENST00000521439 BEND7Q8N7W2 519 aaPredicted RBP11.04□□□□□ -0.64
NUDCD1-204ENST00000521439 TNFRSF25Q93038 417 aa11.04□□□□□ -0.64
NUDCD1-204ENST00000521439 BTBD6Q96KE9 485 aa11.04□□□□□ -0.64
NUDCD1-204ENST00000521439 SETDB2Q96T68 719 aa11.04□□□□□ -0.64
NUDCD1-204ENST00000521439 BCL11AQ9H165 835 aa11.04□□□□□ -0.64
NUDCD1-204ENST00000521439 CNTN3Q9P232 1028 aa11.04□□□□□ -0.64
NUDCD1-204ENST00000521439 ELOA3CA0A087WX78 387 aaPredicted RBP11.03□□□□□ -0.64
NUDCD1-204ENST00000521439 ELOA3DA6NLF2 546 aaPredicted RBP11.03□□□□□ -0.64
NUDCD1-204ENST00000521439 RANGAP1P46060 587 aaPredicted RBP11.03□□□□□ -0.64
NUDCD1-204ENST00000521439 ELOA3BQ3SY89 546 aa11.03□□□□□ -0.64
NUDCD1-204ENST00000521439 C1orf127Q8N9H9 656 aa11.03□□□□□ -0.64
NUDCD1-204ENST00000521439 ELOA3Q8NG57 546 aa11.03□□□□□ -0.64
NUDCD1-204ENST00000521439 FBF1Q8TES7 1133 aa11.03□□□□□ -0.64
NUDCD1-204ENST00000521439 BHMTQ93088 406 aa11.03□□□□□ -0.64
NUDCD1-204ENST00000521439 PMEPA1Q969W9 287 aa11.03□□□□□ -0.64
NUDCD1-204ENST00000521439 DUSP9Q99956 384 aaKnown RBP11.03□□□□□ -0.64
NUDCD1-204ENST00000521439 CHRDQ9H2X0 955 aa11.03□□□□□ -0.64
NUDCD1-204ENST00000521439 RRAGCQ9HB90 399 aa11.03□□□□□ -0.64
NUDCD1-204ENST00000521439 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.03□□□□□ -0.64
NUDCD1-204ENST00000521439 ADARB2-AS1A8MUL3 147 aa11.02□□□□□ -0.65
NUDCD1-204ENST00000521439 RARAP10276 462 aa11.02□□□□□ -0.65
NUDCD1-204ENST00000521439 NFKB1P19838 968 aa11.02□□□□□ -0.65
NUDCD1-204ENST00000521439 ALAS2P22557 587 aa11.02□□□□□ -0.65
NUDCD1-204ENST00000521439 USPL1Q5W0Q7 1092 aa11.02□□□□□ -0.65
NUDCD1-204ENST00000521439 CHSY3Q70JA7 882 aa11.02□□□□□ -0.65
NUDCD1-204ENST00000521439 KIAA1522Q9P206 1035 aaPredicted RBP11.02□□□□□ -0.65
NUDCD1-204ENST00000521439 ZFATQ9P243 1243 aa11.02□□□□□ -0.65
NUDCD1-204ENST00000521439 PARP2Q9UGN5 583 aa11.02□□□□□ -0.65
NUDCD1-204ENST00000521439 MMP20O60882 483 aa11.01□□□□□ -0.65
NUDCD1-204ENST00000521439 XPCQ01831 940 aaPredicted RBP11.01□□□□□ -0.65
NUDCD1-204ENST00000521439 KANK3Q6NY19 840 aa11.01□□□□□ -0.65
NUDCD1-204ENST00000521439 MDFIQ99750 246 aa11.01□□□□□ -0.65
NUDCD1-204ENST00000521439 MKL2Q9ULH7 1088 aa11.01□□□□□ -0.65
NUDCD1-204ENST00000521439 CNTNAP5Q8WYK1 1306 aa11.01□□□□□ -0.65
NUDCD1-204ENST00000521439 MAP3K6O95382 1288 aa11□□□□□ -0.65
NUDCD1-204ENST00000521439 CES1P23141 567 aa11□□□□□ -0.65
NUDCD1-204ENST00000521439 SNRPNP63162 240 aaKnown RBP11□□□□□ -0.65
NUDCD1-204ENST00000521439 OR13H1Q8NG92 308 aa11□□□□□ -0.65
NUDCD1-204ENST00000521439 CCDC74AQ96AQ1 378 aa11□□□□□ -0.65
NUDCD1-204ENST00000521439 EREGO14944 169 aa10.99□□□□□ -0.65
NUDCD1-204ENST00000521439 IRS1P35568 1242 aa10.99□□□□□ -0.65
NUDCD1-204ENST00000521439 TLR7Q9NYK1 1049 aaKnown RBP10.99□□□□□ -0.65
NUDCD1-204ENST00000521439 PIK3R2O00459 728 aa10.98□□□□□ -0.65
NUDCD1-204ENST00000521439 VAMP1P23763 118 aa10.98□□□□□ -0.65
NUDCD1-204ENST00000521439 DAB2P98082 770 aa10.98□□□□□ -0.65
NUDCD1-204ENST00000521439 RNF19AQ9NV58 838 aa10.98□□□□□ -0.65
NUDCD1-204ENST00000521439 CYP2E1P05181 493 aaPredicted RBP10.97□□□□□ -0.65
NUDCD1-204ENST00000521439 POLR3DP05423 398 aaPredicted RBP10.97□□□□□ -0.65
NUDCD1-204ENST00000521439 PSAPP07602 524 aa10.97□□□□□ -0.65
NUDCD1-204ENST00000521439 HOXB4P17483 251 aaPredicted RBP10.97□□□□□ -0.65
NUDCD1-204ENST00000521439 SOX18P35713 384 aa10.97□□□□□ -0.65
NUDCD1-204ENST00000521439 ADH7P40394 386 aa10.97□□□□□ -0.65
NUDCD1-204ENST00000521439 DGKGP49619 791 aa10.97□□□□□ -0.65
NUDCD1-204ENST00000521439 GSK3AP49840 483 aa10.97□□□□□ -0.65
NUDCD1-204ENST00000521439 RASSF7Q02833 373 aa10.97□□□□□ -0.65
NUDCD1-204ENST00000521439 TMC4Q7Z404 712 aa10.97□□□□□ -0.65
NUDCD1-204ENST00000521439 GALNT12Q8IXK2 581 aa10.97□□□□□ -0.65
NUDCD1-204ENST00000521439 FRMD6Q96NE9 622 aa10.97□□□□□ -0.65
NUDCD1-204ENST00000521439 GNA15P30679 374 aa10.96□□□□□ -0.65
NUDCD1-204ENST00000521439 ITGAEP38570 1179 aa10.96□□□□□ -0.65
NUDCD1-204ENST00000521439 FAM161BQ96MY7 647 aa10.96□□□□□ -0.65
NUDCD1-204ENST00000521439 UBE2OQ9C0C9 1292 aaKnown RBP10.96□□□□□ -0.65
NUDCD1-204ENST00000521439 PLAURQ03405 335 aa10.95□□□□□ -0.66
NUDCD1-204ENST00000521439 PSMD2Q13200 908 aa10.95□□□□□ -0.66
NUDCD1-204ENST00000521439 MRPL58Q14197 206 aaKnown RBP10.95□□□□□ -0.66
NUDCD1-204ENST00000521439 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.95□□□□□ -0.66
NUDCD1-204ENST00000521439 DHX32Q7L7V1 743 aaKnown RBP10.95□□□□□ -0.66
NUDCD1-204ENST00000521439 EPS8L3Q8TE67 593 aaKnown RBP10.95□□□□□ -0.66
NUDCD1-204ENST00000521439 NLRP2Q9NX02 1062 aa10.95□□□□□ -0.66
NUDCD1-204ENST00000521439 KANSL3Q9P2N6 904 aa10.95□□□□□ -0.66
NUDCD1-204ENST00000521439 SPG7Q9UQ90 795 aa10.95□□□□□ -0.66
NUDCD1-204ENST00000521439 SORBS3O60504 671 aa10.94□□□□□ -0.66
NUDCD1-204ENST00000521439 HOXD8P13378 290 aaPredicted RBP10.94□□□□□ -0.66
NUDCD1-204ENST00000521439 LINC00114Q6XXX2 140 aa10.94□□□□□ -0.66
NUDCD1-204ENST00000521439 TMEM151AQ8N4L1 468 aa10.94□□□□□ -0.66
NUDCD1-204ENST00000521439 MRS2Q9HD23 443 aa10.94□□□□□ -0.66
NUDCD1-204ENST00000521439 NPHS2Q9NP85 383 aa10.94□□□□□ -0.66
NUDCD1-204ENST00000521439 SALL4Q9UJQ4 1053 aa10.94□□□□□ -0.66
NUDCD1-204ENST00000521439 GNB5O14775 395 aa10.93□□□□□ -0.66
NUDCD1-204ENST00000521439 GDF11O95390 407 aa10.93□□□□□ -0.66
NUDCD1-204ENST00000521439 EDN3P14138 238 aa10.93□□□□□ -0.66
NUDCD1-204ENST00000521439 TBC1D8BQ0IIM8 1120 aa10.93□□□□□ -0.66
NUDCD1-204ENST00000521439 PI16Q6UXB8 463 aa10.93□□□□□ -0.66
NUDCD1-204ENST00000521439 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.93□□□□□ -0.66
NUDCD1-204ENST00000521439 KIF4AO95239 1232 aa10.92□□□□□ -0.66
NUDCD1-204ENST00000521439 NRLP54845 237 aa10.92□□□□□ -0.66
NUDCD1-204ENST00000521439 HYAL2Q12891 473 aa10.92□□□□□ -0.66
NUDCD1-204ENST00000521439 PCSK7Q16549 785 aa10.92□□□□□ -0.66
NUDCD1-204ENST00000521439 IGFLR1Q9H665 355 aa10.92□□□□□ -0.66
NUDCD1-204ENST00000521439 AK5Q9Y6K8 562 aa10.92□□□□□ -0.66
NUDCD1-204ENST00000521439 GIPC1O14908 333 aa10.91□□□□□ -0.66
NUDCD1-204ENST00000521439 NCAPG2Q86XI2 1143 aa10.91□□□□□ -0.66
NUDCD1-204ENST00000521439 TRPM4Q8TD43 1214 aa10.91□□□□□ -0.66
NUDCD1-204ENST00000521439 DNAJB12Q9NXW2 375 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms