RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 CSB-PGBD3P0DP91 1061 aa6.35□□□□□ -1.39
VPS13B-208ENST00000521037 ATF3P18847 181 aa6.35□□□□□ -1.39
VPS13B-208ENST00000521037 ATP4AP20648 1035 aa6.35□□□□□ -1.39
VPS13B-208ENST00000521037 EFHC2Q5JST6 749 aa6.35□□□□□ -1.39
VPS13B-208ENST00000521037 GNASQ5JWF2 1037 aa6.35□□□□□ -1.39
VPS13B-208ENST00000521037 PGBD3Q8N328 593 aa6.35□□□□□ -1.39
VPS13B-208ENST00000521037 BANK1Q8NDB2 785 aa6.35□□□□□ -1.39
VPS13B-208ENST00000521037 RIMS2Q9UQ26 1411 aa6.34□□□□□ -1.39
VPS13B-208ENST00000521037 NALCNQ8IZF0 1738 aa6.34□□□□□ -1.39
VPS13B-208ENST00000521037 MARF1Q9Y4F3 1742 aaKnown RBP6.34□□□□□ -1.39
VPS13B-208ENST00000521037 NEURL1BA8MQ27 555 aa6.34□□□□□ -1.39
VPS13B-208ENST00000521037 FAM182BQ5T319 152 aa6.34□□□□□ -1.39
VPS13B-208ENST00000521037 PCDHGC4Q9Y5F7 938 aa6.34□□□□□ -1.39
VPS13B-208ENST00000521037 EHBP1L1Q8N3D4 1523 aa6.34□□□□□ -1.39
VPS13B-208ENST00000521037 MYO5BQ9ULV0 1848 aa6.34□□□□□ -1.4
VPS13B-208ENST00000521037 PXDNQ92626 1479 aa6.34□□□□□ -1.4
VPS13B-208ENST00000521037 PIK3R2O00459 728 aa6.33□□□□□ -1.4
VPS13B-208ENST00000521037 MYCP01106 439 aaPredicted RBP6.33□□□□□ -1.4
VPS13B-208ENST00000521037 AMPD1P23109 780 aa6.33□□□□□ -1.4
VPS13B-208ENST00000521037 TNP2Q05952 138 aa6.33□□□□□ -1.4
VPS13B-208ENST00000521037 ESCO1Q5FWF5 840 aa6.33□□□□□ -1.4
VPS13B-208ENST00000521037 CHSY3Q70JA7 882 aa6.33□□□□□ -1.4
VPS13B-208ENST00000521037 NLRP8Q86W28 1048 aa6.33□□□□□ -1.4
VPS13B-208ENST00000521037 FCHSD1Q86WN1 690 aa6.33□□□□□ -1.4
VPS13B-208ENST00000521037 TRIM11Q96F44 468 aa6.33□□□□□ -1.4
VPS13B-208ENST00000521037 CAMKK2Q96RR4 588 aa6.33□□□□□ -1.4
VPS13B-208ENST00000521037 MDFIQ99750 246 aa6.33□□□□□ -1.4
VPS13B-208ENST00000521037 AMOTL2Q9Y2J4 779 aa6.33□□□□□ -1.4
VPS13B-208ENST00000521037 ZNF330Q9Y3S2 320 aaPredicted RBP6.33□□□□□ -1.4
VPS13B-208ENST00000521037 ADGRL3Q9HAR2 1447 aa6.33□□□□□ -1.4
VPS13B-208ENST00000521037 SCNN1DP51172 638 aa6.32□□□□□ -1.4
VPS13B-208ENST00000521037 DOC2BQ14184 412 aa6.32□□□□□ -1.4
VPS13B-208ENST00000521037 FOXD4L6Q3SYB3 417 aaPredicted RBP6.32□□□□□ -1.4
VPS13B-208ENST00000521037 FOXD4L3Q6VB84 417 aaPredicted RBP6.32□□□□□ -1.4
VPS13B-208ENST00000521037 ORAI2Q96SN7 254 aa6.32□□□□□ -1.4
VPS13B-208ENST00000521037 AVENQ9NQS1 362 aaPredicted RBP6.32□□□□□ -1.4
VPS13B-208ENST00000521037 SNRKQ9NRH2 765 aa6.32□□□□□ -1.4
VPS13B-208ENST00000521037 METP08581 1390 aa6.31□□□□□ -1.4
VPS13B-208ENST00000521037 DUOX2Q9NRD8 1548 aa6.31□□□□□ -1.4
VPS13B-208ENST00000521037 RREB1Q92766 1687 aa6.31□□□□□ -1.4
VPS13B-208ENST00000521037 MAPTP10636 758 aaKnown RBP6.31□□□□□ -1.4
VPS13B-208ENST00000521037 USP4Q13107 963 aa6.31□□□□□ -1.4
VPS13B-208ENST00000521037 EZH2Q15910 746 aaKnown RBP6.31□□□□□ -1.4
VPS13B-208ENST00000521037 FIGNL1Q6PIW4 674 aa6.31□□□□□ -1.4
VPS13B-208ENST00000521037 UNC5CLQ8IV45 518 aa6.31□□□□□ -1.4
VPS13B-208ENST00000521037 C1orf216Q8TAB5 229 aa6.31□□□□□ -1.4
VPS13B-208ENST00000521037 SEMA6BQ9H3T3 888 aa6.31□□□□□ -1.4
VPS13B-208ENST00000521037 NOP53Q9NZM5 478 aaKnown RBP6.31□□□□□ -1.4
VPS13B-208ENST00000521037 NDUFB9Q9Y6M9 179 aa6.31□□□□□ -1.4
VPS13B-208ENST00000521037 NINLQ9Y2I6 1382 aa6.31□□□□□ -1.4
VPS13B-208ENST00000521037 INHAP05111 366 aa6.3□□□□□ -1.4
VPS13B-208ENST00000521037 NKAPLQ5M9Q1 402 aa6.3□□□□□ -1.4
VPS13B-208ENST00000521037 HOMEZQ8IX15 550 aa6.3□□□□□ -1.4
VPS13B-208ENST00000521037 NUP188Q5SRE5 1749 aa6.3□□□□□ -1.4
VPS13B-208ENST00000521037 GCC2Q8IWJ2 1684 aa6.3□□□□□ -1.4
VPS13B-208ENST00000521037 PCNTO95613 3336 aa6.29□□□□□ -1.4
VPS13B-208ENST00000521037 ATXN7O15265 892 aaPredicted RBP6.29□□□□□ -1.4
VPS13B-208ENST00000521037 ADH6P28332 368 aa6.29□□□□□ -1.4
VPS13B-208ENST00000521037 GTF2E1P29083 439 aaPredicted RBP6.29□□□□□ -1.4
VPS13B-208ENST00000521037 COL9A3Q14050 684 aaPredicted RBP6.29□□□□□ -1.4
VPS13B-208ENST00000521037 RSPO4Q2I0M5 234 aaPredicted RBP6.29□□□□□ -1.4
VPS13B-208ENST00000521037 KRT27Q7Z3Y8 459 aa6.29□□□□□ -1.4
VPS13B-208ENST00000521037 IL27Q8NEV9 243 aa6.29□□□□□ -1.4
VPS13B-208ENST00000521037 PLVAPQ9BX97 442 aa6.29□□□□□ -1.4
VPS13B-208ENST00000521037 SLC52A1Q9NWF4 448 aa6.29□□□□□ -1.4
VPS13B-208ENST00000521037 IQSEC3Q9UPP2 1182 aaPredicted RBP6.29□□□□□ -1.4
VPS13B-208ENST00000521037 ERBINQ96RT1 1412 aa6.28□□□□□ -1.4
VPS13B-208ENST00000521037 A0A1W2PNR3 127 aa6.28□□□□□ -1.4
VPS13B-208ENST00000521037 PLA2G4AP47712 749 aa6.28□□□□□ -1.4
VPS13B-208ENST00000521037 TLR1Q15399 786 aa6.28□□□□□ -1.4
VPS13B-208ENST00000521037 VPS72Q15906 364 aa6.28□□□□□ -1.4
VPS13B-208ENST00000521037 TBC1D9Q6ZT07 1266 aa6.28□□□□□ -1.4
VPS13B-208ENST00000521037 C14orf37Q86TY3 774 aa6.28□□□□□ -1.4
VPS13B-208ENST00000521037 KRTAP1-3Q8IUG1 177 aa6.28□□□□□ -1.4
VPS13B-208ENST00000521037 SLC4A9Q96Q91 983 aa6.28□□□□□ -1.4
VPS13B-208ENST00000521037 KRTAP4-12Q9BQ66 201 aa6.28□□□□□ -1.4
VPS13B-208ENST00000521037 PDGFDQ9GZP0 370 aaPredicted RBP6.28□□□□□ -1.4
VPS13B-208ENST00000521037 THSD7AQ9UPZ6 1657 aa6.28□□□□□ -1.4
VPS13B-208ENST00000521037 CASZ1Q86V15 1759 aa6.28□□□□□ -1.4
VPS13B-208ENST00000521037 RGPD1P0DJD0 1748 aa6.28□□□□□ -1.4
VPS13B-208ENST00000521037 SHANK3Q9BYB0 1731 aa6.28□□□□□ -1.4
VPS13B-208ENST00000521037 PRAG1Q86YV5 1406 aa6.27□□□□□ -1.41
VPS13B-208ENST00000521037 EFSO43281 561 aa6.27□□□□□ -1.41
VPS13B-208ENST00000521037 PPP1R15AO75807 674 aaPredicted RBP6.27□□□□□ -1.41
VPS13B-208ENST00000521037 CD33P20138 364 aa6.27□□□□□ -1.41
VPS13B-208ENST00000521037 GATA4P43694 442 aa6.27□□□□□ -1.41
VPS13B-208ENST00000521037 SMTNP53814 917 aa6.27□□□□□ -1.41
VPS13B-208ENST00000521037 IRF5Q13568 498 aa6.27□□□□□ -1.41
VPS13B-208ENST00000521037 MTFR1Q15390 333 aa6.27□□□□□ -1.41
VPS13B-208ENST00000521037 ZNF468Q5VIY5 522 aaPredicted RBP6.27□□□□□ -1.41
VPS13B-208ENST00000521037 ZIC5Q96T25 663 aa6.27□□□□□ -1.41
VPS13B-208ENST00000521037 NIFKQ9BYG3 293 aaKnown RBP6.27□□□□□ -1.41
VPS13B-208ENST00000521037 STRN4Q9NRL3 753 aa6.27□□□□□ -1.41
VPS13B-208ENST00000521037 PTPN23Q9H3S7 1636 aa6.27□□□□□ -1.41
VPS13B-208ENST00000521037 NRAPQ86VF7 1730 aa6.27□□□□□ -1.41
VPS13B-208ENST00000521037 USP32Q8NFA0 1604 aa6.26□□□□□ -1.41
VPS13B-208ENST00000521037 UBTFP17480 764 aaKnown RBP6.26□□□□□ -1.41
VPS13B-208ENST00000521037 PCBP4P57723 403 aaKnown RBP6.26□□□□□ -1.41
VPS13B-208ENST00000521037 ZMYM1Q5SVZ6 1142 aa6.26□□□□□ -1.41
VPS13B-208ENST00000521037 C7orf43Q8WVR3 580 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms