RNA–Protein interactions for RNA: ENST00000520790.1

PCDHGB6-201, Transcript of protocadherin gamma subfamily B, 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB6, Length 4,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6-201ENST00000520790 HOMER1Q86YM7 354 aa14□□□□□ -0.17
PCDHGB6-201ENST00000520790 MAGEB6Q8N7X4 407 aa14□□□□□ -0.17
PCDHGB6-201ENST00000520790 CTCFLQ8NI51 663 aaPredicted RBP14□□□□□ -0.17
PCDHGB6-201ENST00000520790 TSPY3P0CV98 308 aa14□□□□□ -0.17
PCDHGB6-201ENST00000520790 TSPY8P0CW00 308 aa14□□□□□ -0.17
PCDHGB6-201ENST00000520790 TBC1D10BQ4KMP7 808 aaPredicted RBP14□□□□□ -0.17
PCDHGB6-201ENST00000520790 SEC31BQ9NQW1 1179 aa14□□□□□ -0.17
PCDHGB6-201ENST00000520790 KIDINS220Q9ULH0 1771 aa13.99□□□□□ -0.17
PCDHGB6-201ENST00000520790 CEP152O94986 1710 aa13.99□□□□□ -0.17
PCDHGB6-201ENST00000520790 TBC1D9BQ66K14 1250 aa13.99□□□□□ -0.17
PCDHGB6-201ENST00000520790 FNBP4Q8N3X1 1017 aaPredicted RBP13.99□□□□□ -0.17
PCDHGB6-201ENST00000520790 OTUD7BQ6GQQ9 843 aa13.99□□□□□ -0.17
PCDHGB6-201ENST00000520790 TEKT1Q969V4 418 aa13.99□□□□□ -0.17
PCDHGB6-201ENST00000520790 PTCH1Q13635 1447 aa13.99□□□□□ -0.17
PCDHGB6-201ENST00000520790 MAGEB6P1A0A0J9YX57 407 aa13.99□□□□□ -0.17
PCDHGB6-201ENST00000520790 ZBTB38Q8NAP3 1195 aaPredicted RBP13.99□□□□□ -0.17
PCDHGB6-201ENST00000520790 GPR101Q96P66 508 aaPredicted RBP13.99□□□□□ -0.17
PCDHGB6-201ENST00000520790 SMC3Q9UQE7 1217 aa13.99□□□□□ -0.17
PCDHGB6-201ENST00000520790 U3KPZ7 1027 aaPredicted RBP13.99□□□□□ -0.17
PCDHGB6-201ENST00000520790 CPSF1Q10570 1443 aaKnown RBP13.99□□□□□ -0.17
PCDHGB6-201ENST00000520790 CPS1P31327 1500 aa13.98□□□□□ -0.17
PCDHGB6-201ENST00000520790 SPDYE4A6NLX3 237 aa13.98□□□□□ -0.17
PCDHGB6-201ENST00000520790 MRPL50Q8N5N7 158 aaKnown RBP13.98□□□□□ -0.17
PCDHGB6-201ENST00000520790 ZHX3Q9H4I2 956 aa13.98□□□□□ -0.17
PCDHGB6-201ENST00000520790 RNF41Q9H4P4 317 aaPredicted RBP13.98□□□□□ -0.17
PCDHGB6-201ENST00000520790 MAST3O60307 1309 aa13.98□□□□□ -0.17
PCDHGB6-201ENST00000520790 IRX3P78415 501 aaPredicted RBP13.98□□□□□ -0.17
PCDHGB6-201ENST00000520790 TTC6Q86TZ1 520 aa13.98□□□□□ -0.17
PCDHGB6-201ENST00000520790 A0A1B0GUL7 405 aa13.98□□□□□ -0.17
PCDHGB6-201ENST00000520790 IFIT3O14879 490 aaKnown RBP13.98□□□□□ -0.17
PCDHGB6-201ENST00000520790 NEK4P51957 841 aa13.98□□□□□ -0.17
PCDHGB6-201ENST00000520790 DPEP1P16444 411 aa13.98□□□□□ -0.17
PCDHGB6-201ENST00000520790 BLMP54132 1417 aaPredicted RBP13.98□□□□□ -0.17
PCDHGB6-201ENST00000520790 IQSEC2Q5JU85 1478 aa13.97□□□□□ -0.17
PCDHGB6-201ENST00000520790 HLFQ16534 295 aa13.97□□□□□ -0.17
PCDHGB6-201ENST00000520790 HEG1Q9ULI3 1381 aa13.97□□□□□ -0.17
PCDHGB6-201ENST00000520790 IQCA1LA6NCM1 817 aa13.97□□□□□ -0.17
PCDHGB6-201ENST00000520790 NBPF7P0C2Y1 421 aaPredicted RBP13.97□□□□□ -0.17
PCDHGB6-201ENST00000520790 SUSD4Q5VX71 490 aa13.97□□□□□ -0.17
PCDHGB6-201ENST00000520790 CUL5Q93034 780 aa13.97□□□□□ -0.17
PCDHGB6-201ENST00000520790 USP40Q9NVE5 1235 aa13.97□□□□□ -0.17
PCDHGB6-201ENST00000520790 SSBP05455 408 aaKnown RBP eCLIP13.97□□□□□ -0.17
PCDHGB6-201ENST00000520790 KRT18P05783 430 aaKnown RBP13.97□□□□□ -0.17
PCDHGB6-201ENST00000520790 BLOC1S2Q6QNY1 142 aa13.97□□□□□ -0.17
PCDHGB6-201ENST00000520790 TBC1D22AQ8WUA7 517 aa13.97□□□□□ -0.17
PCDHGB6-201ENST00000520790 CDK5RAP3Q96JB5 506 aa13.97□□□□□ -0.17
PCDHGB6-201ENST00000520790 GREM2Q9H772 168 aa13.97□□□□□ -0.17
PCDHGB6-201ENST00000520790 MST1RQ04912 1400 aa13.96□□□□□ -0.17
PCDHGB6-201ENST00000520790 C20orf194Q5TEA3 1177 aa13.96□□□□□ -0.17
PCDHGB6-201ENST00000520790 VSIG10Q8N0Z9 540 aa13.96□□□□□ -0.17
PCDHGB6-201ENST00000520790 SYNE4Q8N205 404 aa13.96□□□□□ -0.17
PCDHGB6-201ENST00000520790 C2orf69Q8N8R5 385 aa13.96□□□□□ -0.17
PCDHGB6-201ENST00000520790 FHDC1Q9C0D6 1143 aaPredicted RBP13.96□□□□□ -0.17
PCDHGB6-201ENST00000520790 PAGR1Q9BTK6 254 aa13.96□□□□□ -0.17
PCDHGB6-201ENST00000520790 TANGO6Q9C0B7 1094 aa13.96□□□□□ -0.17
PCDHGB6-201ENST00000520790 TRIM35Q9UPQ4 493 aa13.96□□□□□ -0.17
PCDHGB6-201ENST00000520790 NEURL1BA8MQ27 555 aa13.96□□□□□ -0.18
PCDHGB6-201ENST00000520790 COL23A1Q86Y22 540 aaPredicted RBP13.96□□□□□ -0.18
PCDHGB6-201ENST00000520790 SUCLG2Q96I99 432 aa13.96□□□□□ -0.18
PCDHGB6-201ENST00000520790 PIK3C2BO00750 1634 aa13.96□□□□□ -0.18
PCDHGB6-201ENST00000520790 TPD52L1Q16890 204 aaPredicted RBP13.95□□□□□ -0.18
PCDHGB6-201ENST00000520790 CLEC4GQ6UXB4 293 aa13.95□□□□□ -0.18
PCDHGB6-201ENST00000520790 MFSD6Q6ZSS7 791 aa13.95□□□□□ -0.18
PCDHGB6-201ENST00000520790 KAT14Q9H8E8 782 aa13.95□□□□□ -0.18
PCDHGB6-201ENST00000520790 AATFQ9NY61 560 aaKnown RBP eCLIP13.95□□□□□ -0.18
PCDHGB6-201ENST00000520790 ZNF804BA4D1E1 1349 aa13.95□□□□□ -0.18
PCDHGB6-201ENST00000520790 ERBB4Q15303 1308 aa13.95□□□□□ -0.18
PCDHGB6-201ENST00000520790 ZMYM4Q5VZL5 1548 aa13.95□□□□□ -0.18
PCDHGB6-201ENST00000520790 CYP19A1P11511 503 aaPredicted RBP13.95□□□□□ -0.18
PCDHGB6-201ENST00000520790 PCCAP05165 728 aaPredicted RBP13.95□□□□□ -0.18
PCDHGB6-201ENST00000520790 CHRNDQ07001 517 aa13.95□□□□□ -0.18
PCDHGB6-201ENST00000520790 LPIN2Q92539 896 aa13.95□□□□□ -0.18
PCDHGB6-201ENST00000520790 CCDC47Q96A33 483 aaKnown RBP13.95□□□□□ -0.18
PCDHGB6-201ENST00000520790 CYP46A1Q9Y6A2 500 aa13.95□□□□□ -0.18
PCDHGB6-201ENST00000520790 XDHP47989 1333 aa13.94□□□□□ -0.18
PCDHGB6-201ENST00000520790 COL15A1P39059 1388 aa13.94□□□□□ -0.18
PCDHGB6-201ENST00000520790 AOC3Q16853 763 aa13.94□□□□□ -0.18
PCDHGB6-201ENST00000520790 GADL1Q6ZQY3 521 aa13.94□□□□□ -0.18
PCDHGB6-201ENST00000520790 NLRP10Q86W26 655 aa13.94□□□□□ -0.18
PCDHGB6-201ENST00000520790 JAKMIP1Q96N16 626 aaKnown RBP13.94□□□□□ -0.18
PCDHGB6-201ENST00000520790 DCAF15Q66K64 600 aa13.94□□□□□ -0.18
PCDHGB6-201ENST00000520790 PRPF40BQ6NWY9 871 aaKnown RBP13.94□□□□□ -0.18
PCDHGB6-201ENST00000520790 TBC1D9Q6ZT07 1266 aa13.94□□□□□ -0.18
PCDHGB6-201ENST00000520790 ARMC9Q7Z3E5 817 aa13.94□□□□□ -0.18
PCDHGB6-201ENST00000520790 MAPKAPK5Q8IW41 473 aa13.94□□□□□ -0.18
PCDHGB6-201ENST00000520790 MPHOSPH6Q99547 160 aaKnown RBP13.94□□□□□ -0.18
PCDHGB6-201ENST00000520790 BRIP1Q9BX63 1249 aa13.94□□□□□ -0.18
PCDHGB6-201ENST00000520790 LINC00116Q8NCU8 138 aa13.94□□□□□ -0.18
PCDHGB6-201ENST00000520790 SLC10A4Q96EP9 437 aa13.94□□□□□ -0.18
PCDHGB6-201ENST00000520790 PARD3Q8TEW0 1356 aa13.94□□□□□ -0.18
PCDHGB6-201ENST00000520790 NCOA3Q9Y6Q9 1424 aa13.94□□□□□ -0.18
PCDHGB6-201ENST00000520790 CNGA1P29973 690 aa13.93□□□□□ -0.18
PCDHGB6-201ENST00000520790 CA8P35219 290 aa13.93□□□□□ -0.18
PCDHGB6-201ENST00000520790 CPXCR1Q8N123 301 aa13.93□□□□□ -0.18
PCDHGB6-201ENST00000520790 DDX11Q96FC9 970 aa13.93□□□□□ -0.18
PCDHGB6-201ENST00000520790 CLTCL1P53675 1640 aa13.93□□□□□ -0.18
PCDHGB6-201ENST00000520790 ARHGEF6Q15052 776 aa13.93□□□□□ -0.18
PCDHGB6-201ENST00000520790 SUPT20HL1Q3ZLR7 823 aa13.93□□□□□ -0.18
PCDHGB6-201ENST00000520790 XAGE2Q96GT9 111 aa13.93□□□□□ -0.18
PCDHGB6-201ENST00000520790 ATP8B2P98198 1209 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms