RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 OVOS2A0A0J9YW53 1432 aa6.41□□□□□ -1.38
SDC2-204ENST00000519914 OVOS2Q6IE36 1432 aa6.41□□□□□ -1.38
SDC2-204ENST00000519914 ATP5J2-PTCD1G3V325 749 aa6.41□□□□□ -1.38
SDC2-204ENST00000519914 GPR25O00155 361 aa6.41□□□□□ -1.38
SDC2-204ENST00000519914 ARHGEF15O94989 841 aa6.41□□□□□ -1.38
SDC2-204ENST00000519914 ZNF853P0CG23 659 aa6.41□□□□□ -1.38
SDC2-204ENST00000519914 IL13P35225 146 aa6.41□□□□□ -1.38
SDC2-204ENST00000519914 CALD1Q05682 793 aaKnown RBP6.41□□□□□ -1.38
SDC2-204ENST00000519914 SKAP1Q86WV1 359 aa6.41□□□□□ -1.38
SDC2-204ENST00000519914 DZIP1LQ8IYY4 767 aaKnown RBP6.41□□□□□ -1.38
SDC2-204ENST00000519914 ARHGAP45Q92619 1136 aa6.41□□□□□ -1.38
SDC2-204ENST00000519914 DDX19BQ9UMR2 479 aa6.41□□□□□ -1.38
SDC2-204ENST00000519914 KIF24Q5T7B8 1368 aa6.41□□□□□ -1.38
SDC2-204ENST00000519914 SSH2Q76I76 1423 aa6.41□□□□□ -1.38
SDC2-204ENST00000519914 ZBBXA8MT70 800 aa6.4□□□□□ -1.39
SDC2-204ENST00000519914 FBXO45P0C2W1 286 aa6.4□□□□□ -1.39
SDC2-204ENST00000519914 CANXP27824 592 aaKnown RBP6.4□□□□□ -1.39
SDC2-204ENST00000519914 DEKP35659 375 aaKnown RBP6.4□□□□□ -1.39
SDC2-204ENST00000519914 RNF144AP50876 292 aaPredicted RBP6.4□□□□□ -1.39
SDC2-204ENST00000519914 EXOSC9Q06265 439 aaKnown RBP6.4□□□□□ -1.39
SDC2-204ENST00000519914 POU4F2Q12837 409 aa6.4□□□□□ -1.39
SDC2-204ENST00000519914 SAFB2Q14151 953 aaKnown RBP eCLIP6.4□□□□□ -1.39
SDC2-204ENST00000519914 NFE2L2Q16236 605 aa6.4□□□□□ -1.39
SDC2-204ENST00000519914 TMEM259Q4ZIN3 620 aa6.4□□□□□ -1.39
SDC2-204ENST00000519914 ATF7IPQ6VMQ6 1270 aa6.4□□□□□ -1.39
SDC2-204ENST00000519914 SMC5Q8IY18 1101 aa6.4□□□□□ -1.39
SDC2-204ENST00000519914 SSH1Q8WYL5 1049 aa6.4□□□□□ -1.39
SDC2-204ENST00000519914 GAS2L1Q99501 681 aaPredicted RBP6.4□□□□□ -1.39
SDC2-204ENST00000519914 IFT57Q9NWB7 429 aa6.4□□□□□ -1.39
SDC2-204ENST00000519914 USP31Q70CQ4 1352 aa6.4□□□□□ -1.39
SDC2-204ENST00000519914 A0A1W2PRU2 124 aa6.39□□□□□ -1.39
SDC2-204ENST00000519914 IPO8O15397 1037 aaKnown RBP6.39□□□□□ -1.39
SDC2-204ENST00000519914 TRIM27P14373 513 aa6.39□□□□□ -1.39
SDC2-204ENST00000519914 RIPK4P57078 832 aa6.39□□□□□ -1.39
SDC2-204ENST00000519914 MAP3K10Q02779 954 aa6.39□□□□□ -1.39
SDC2-204ENST00000519914 GAS6Q14393 721 aa6.39□□□□□ -1.39
SDC2-204ENST00000519914 NEUROD2Q15784 382 aa6.39□□□□□ -1.39
SDC2-204ENST00000519914 GPAT2Q6NUI2 795 aa6.39□□□□□ -1.39
SDC2-204ENST00000519914 WAPLQ7Z5K2 1190 aa6.39□□□□□ -1.39
SDC2-204ENST00000519914 NPM2Q86SE8 214 aaKnown RBP6.39□□□□□ -1.39
SDC2-204ENST00000519914 SEPT12Q8IYM1 358 aa6.39□□□□□ -1.39
SDC2-204ENST00000519914 XRN1Q8IZH2 1706 aaKnown RBP6.39□□□□□ -1.39
SDC2-204ENST00000519914 FMN2Q9NZ56 1722 aa6.39□□□□□ -1.39
SDC2-204ENST00000519914 LOC100996750A0A140TA64 210 aa6.38□□□□□ -1.39
SDC2-204ENST00000519914 U2SURPO15042 1029 aaKnown RBP6.38□□□□□ -1.39
SDC2-204ENST00000519914 CACNA1FO60840 1977 aa6.38□□□□□ -1.39
SDC2-204ENST00000519914 CELA2BP08218 269 aaPredicted RBP6.38□□□□□ -1.39
SDC2-204ENST00000519914 RGS3P49796 1198 aa6.38□□□□□ -1.39
SDC2-204ENST00000519914 SRSF11Q05519 484 aaKnown RBP6.38□□□□□ -1.39
SDC2-204ENST00000519914 LMOD3Q0VAK6 560 aa6.38□□□□□ -1.39
SDC2-204ENST00000519914 DBN1Q16643 649 aa6.38□□□□□ -1.39
SDC2-204ENST00000519914 SLC27A3Q5K4L6 730 aa6.38□□□□□ -1.39
SDC2-204ENST00000519914 FRAT1Q92837 279 aaPredicted RBP6.38□□□□□ -1.39
SDC2-204ENST00000519914 NUDT16Q96DE0 195 aaKnown RBP6.38□□□□□ -1.39
SDC2-204ENST00000519914 ZNF837Q96EG3 531 aaPredicted RBP6.38□□□□□ -1.39
SDC2-204ENST00000519914 TBC1D32Q96NH3 1257 aa6.38□□□□□ -1.39
SDC2-204ENST00000519914 NLRP3Q96P20 1036 aa6.38□□□□□ -1.39
SDC2-204ENST00000519914 KRTAP4-6Q9BYQ5 205 aa6.38□□□□□ -1.39
SDC2-204ENST00000519914 CHMP4BQ9H444 224 aaKnown RBP6.38□□□□□ -1.39
SDC2-204ENST00000519914 PEAK1Q9H792 1746 aa6.38□□□□□ -1.39
SDC2-204ENST00000519914 ROBO2Q9HCK4 1378 aa6.38□□□□□ -1.39
SDC2-204ENST00000519914 SMC4Q9NTJ3 1288 aa6.38□□□□□ -1.39
SDC2-204ENST00000519914 ZBTB40Q9NUA8 1239 aa6.38□□□□□ -1.39
SDC2-204ENST00000519914 TNNQ9UQP3 1299 aa6.38□□□□□ -1.39
SDC2-204ENST00000519914 USP6P35125 1406 aa6.37□□□□□ -1.39
SDC2-204ENST00000519914 PTPRUQ92729 1446 aa6.37□□□□□ -1.39
SDC2-204ENST00000519914 ABCC4O15439 1325 aa6.37□□□□□ -1.39
SDC2-204ENST00000519914 PRR36Q9H6K5 1346 aa6.37□□□□□ -1.39
SDC2-204ENST00000519914 PRKAR2BP31323 418 aa6.37□□□□□ -1.39
SDC2-204ENST00000519914 GNAI1P63096 354 aa6.37□□□□□ -1.39
SDC2-204ENST00000519914 FTSJ3Q8IY81 847 aaKnown RBP6.37□□□□□ -1.39
SDC2-204ENST00000519914 TSR2Q969E8 191 aaKnown RBP6.37□□□□□ -1.39
SDC2-204ENST00000519914 GTPBP3Q969Y2 492 aaKnown RBP6.37□□□□□ -1.39
SDC2-204ENST00000519914 GJD4Q96KN9 370 aaPredicted RBP6.37□□□□□ -1.39
SDC2-204ENST00000519914 N4BP2Q86UW6 1770 aaPredicted RBP6.37□□□□□ -1.39
SDC2-204ENST00000519914 MARF1Q9Y4F3 1742 aaKnown RBP6.37□□□□□ -1.39
SDC2-204ENST00000519914 LRRC37A3O60309 1634 aa6.36□□□□□ -1.39
SDC2-204ENST00000519914 ANKARQ7Z5J8 1434 aa6.36□□□□□ -1.39
SDC2-204ENST00000519914 KIAA0232Q92628 1395 aa6.36□□□□□ -1.39
SDC2-204ENST00000519914 VAMP4O75379 141 aa6.36□□□□□ -1.39
SDC2-204ENST00000519914 NEFMP07197 916 aa6.36□□□□□ -1.39
SDC2-204ENST00000519914 SCTRP47872 440 aa6.36□□□□□ -1.39
SDC2-204ENST00000519914 CC2D2BQ6DHV5 1058 aa6.36□□□□□ -1.39
SDC2-204ENST00000519914 FOXR1Q6PIV2 292 aa6.36□□□□□ -1.39
SDC2-204ENST00000519914 TRIM22Q8IYM9 498 aa6.36□□□□□ -1.39
SDC2-204ENST00000519914 SCARF2Q96GP6 870 aaPredicted RBP6.36□□□□□ -1.39
SDC2-204ENST00000519914 COG3Q96JB2 828 aa6.36□□□□□ -1.39
SDC2-204ENST00000519914 ESF1Q9H501 851 aaKnown RBP6.36□□□□□ -1.39
SDC2-204ENST00000519914 NOB1Q9ULX3 412 aaKnown RBP6.36□□□□□ -1.39
SDC2-204ENST00000519914 PCDHB11Q9Y5F2 797 aa6.36□□□□□ -1.39
SDC2-204ENST00000519914 FER1L4A9Z1Z3 1794 aa6.36□□□□□ -1.39
SDC2-204ENST00000519914 ARHGEF10O15013 1369 aa6.35□□□□□ -1.39
SDC2-204ENST00000519914 TTC21BQ7Z4L5 1316 aa6.35□□□□□ -1.39
SDC2-204ENST00000519914 TTC21AQ8NDW8 1320 aa6.35□□□□□ -1.39
SDC2-204ENST00000519914 BECN1Q14457 450 aa6.35□□□□□ -1.39
SDC2-204ENST00000519914 NFKBIBQ15653 356 aa6.35□□□□□ -1.39
SDC2-204ENST00000519914 NME9Q86XW9 330 aa6.35□□□□□ -1.39
SDC2-204ENST00000519914 TMEM57Q8N5G2 664 aa6.35□□□□□ -1.39
SDC2-204ENST00000519914 PKNOX2Q96KN3 472 aa6.35□□□□□ -1.39
SDC2-204ENST00000519914 BCL2L13Q9BXK5 485 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms