RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 EPS15P42566 896 aa11.32□□□□□ -0.6
PABPC1-213ENST00000519848 RTL5Q5HYW3 569 aaPredicted RBP11.32□□□□□ -0.6
PABPC1-213ENST00000519848 SOGA3Q5TF21 947 aa11.32□□□□□ -0.6
PABPC1-213ENST00000519848 HDGFL1Q5TGJ6 251 aa11.32□□□□□ -0.6
PABPC1-213ENST00000519848 EFCAB3Q8N7B9 438 aa11.32□□□□□ -0.6
PABPC1-213ENST00000519848 JARID2Q92833 1246 aaPredicted RBP11.32□□□□□ -0.6
PABPC1-213ENST00000519848 RPGRQ92834 1020 aaKnown RBP11.32□□□□□ -0.6
PABPC1-213ENST00000519848 CELF1Q92879 486 aaKnown RBP11.32□□□□□ -0.6
PABPC1-213ENST00000519848 GPR101Q96P66 508 aaPredicted RBP11.32□□□□□ -0.6
PABPC1-213ENST00000519848 UTP14AQ9BVJ6 771 aaKnown RBP11.32□□□□□ -0.6
PABPC1-213ENST00000519848 YDJCA8MPS7 323 aa11.31□□□□□ -0.6
PABPC1-213ENST00000519848 ELL2O00472 640 aaPredicted RBP11.31□□□□□ -0.6
PABPC1-213ENST00000519848 GTF2E1P29083 439 aaPredicted RBP11.31□□□□□ -0.6
PABPC1-213ENST00000519848 WDR43Q15061 677 aaKnown RBP eCLIP11.31□□□□□ -0.6
PABPC1-213ENST00000519848 PARP10Q53GL7 1025 aa11.31□□□□□ -0.6
PABPC1-213ENST00000519848 MAP1SQ66K74 1059 aaPredicted RBP11.31□□□□□ -0.6
PABPC1-213ENST00000519848 DLK2Q6UY11 383 aa11.31□□□□□ -0.6
PABPC1-213ENST00000519848 TSR2Q969E8 191 aaKnown RBP11.31□□□□□ -0.6
PABPC1-213ENST00000519848 FAM89AQ96GI7 184 aa11.31□□□□□ -0.6
PABPC1-213ENST00000519848 CFAP44Q96MT7 982 aa11.31□□□□□ -0.6
PABPC1-213ENST00000519848 MKRN1Q9UHC7 482 aaKnown RBP11.31□□□□□ -0.6
PABPC1-213ENST00000519848 ATP6V0A2Q9Y487 856 aa11.31□□□□□ -0.6
PABPC1-213ENST00000519848 WTIPA6NIX2 430 aaPredicted RBP11.3□□□□□ -0.6
PABPC1-213ENST00000519848 HSPA1AP0DMV8 641 aaKnown RBP11.3□□□□□ -0.6
PABPC1-213ENST00000519848 HSPA1BP0DMV9 641 aaKnown RBP11.3□□□□□ -0.6
PABPC1-213ENST00000519848 ALDH1B1P30837 517 aa11.3□□□□□ -0.6
PABPC1-213ENST00000519848 EPHX2P34913 555 aa11.3□□□□□ -0.6
PABPC1-213ENST00000519848 VASPP50552 380 aaPredicted RBP11.3□□□□□ -0.6
PABPC1-213ENST00000519848 LMOD3Q0VAK6 560 aa11.3□□□□□ -0.6
PABPC1-213ENST00000519848 RTKN2Q8IZC4 609 aa11.3□□□□□ -0.6
PABPC1-213ENST00000519848 RTFDC1Q9BY42 306 aaPredicted RBP11.3□□□□□ -0.6
PABPC1-213ENST00000519848 PSME4Q14997 1843 aa11.3□□□□□ -0.6
PABPC1-213ENST00000519848 TRPM7Q96QT4 1865 aa11.29□□□□□ -0.6
PABPC1-213ENST00000519848 CNTNAP1P78357 1384 aa11.29□□□□□ -0.6
PABPC1-213ENST00000519848 ZNF316A6NFI3 1004 aaPredicted RBP11.29□□□□□ -0.6
PABPC1-213ENST00000519848 TRAF5O00463 557 aa11.29□□□□□ -0.6
PABPC1-213ENST00000519848 EGFRP00533 1210 aa11.29□□□□□ -0.6
PABPC1-213ENST00000519848 EAPPQ56P03 285 aaPredicted RBP11.29□□□□□ -0.6
PABPC1-213ENST00000519848 LDHDQ86WU2 507 aa11.29□□□□□ -0.6
PABPC1-213ENST00000519848 PLBD2Q8NHP8 589 aa11.29□□□□□ -0.6
PABPC1-213ENST00000519848 KHSRPQ92945 711 aaKnown RBP eCLIP11.29□□□□□ -0.6
PABPC1-213ENST00000519848 PNNQ9H307 717 aaKnown RBP11.29□□□□□ -0.6
PABPC1-213ENST00000519848 KCNQ5Q9NR82 932 aa11.29□□□□□ -0.6
PABPC1-213ENST00000519848 SH3TC1Q8TE82 1336 aa11.29□□□□□ -0.6
PABPC1-213ENST00000519848 RTL9Q8NET4 1388 aa11.28□□□□□ -0.6
PABPC1-213ENST00000519848 PPIP5K2O43314 1243 aa11.28□□□□□ -0.6
PABPC1-213ENST00000519848 HIRAP54198 1017 aaPredicted RBP11.28□□□□□ -0.6
PABPC1-213ENST00000519848 CXCL9Q07325 125 aa11.28□□□□□ -0.6
PABPC1-213ENST00000519848 GRAPQ13588 217 aa11.28□□□□□ -0.6
PABPC1-213ENST00000519848 G2E3Q7L622 706 aa11.28□□□□□ -0.6
PABPC1-213ENST00000519848 PPP1R42Q7Z4L9 355 aa11.28□□□□□ -0.6
PABPC1-213ENST00000519848 GPC2Q8N158 579 aa11.28□□□□□ -0.6
PABPC1-213ENST00000519848 LARGE2Q8N3Y3 721 aa11.28□□□□□ -0.6
PABPC1-213ENST00000519848 GRAPLQ8TC17 118 aaPredicted RBP11.28□□□□□ -0.6
PABPC1-213ENST00000519848 TRPM4Q8TD43 1214 aa11.28□□□□□ -0.6
PABPC1-213ENST00000519848 RBM17Q96I25 401 aaKnown RBP11.28□□□□□ -0.6
PABPC1-213ENST00000519848 SEC31BQ9NQW1 1179 aa11.28□□□□□ -0.6
PABPC1-213ENST00000519848 TRMT112Q9UI30 125 aaKnown RBP11.28□□□□□ -0.6
PABPC1-213ENST00000519848 HACL1Q9UJ83 578 aa11.28□□□□□ -0.6
PABPC1-213ENST00000519848 GJA3Q9Y6H8 435 aa11.28□□□□□ -0.6
PABPC1-213ENST00000519848 MYH3P11055 1940 aa11.27□□□□□ -0.6
PABPC1-213ENST00000519848 HOXB7P09629 217 aa11.27□□□□□ -0.61
PABPC1-213ENST00000519848 NLRP3Q96P20 1036 aa11.27□□□□□ -0.61
PABPC1-213ENST00000519848 IFT57Q9NWB7 429 aa11.27□□□□□ -0.61
PABPC1-213ENST00000519848 IGKV5-2P06315 115 aa11.26□□□□□ -0.61
PABPC1-213ENST00000519848 GPSM2P81274 684 aa11.26□□□□□ -0.61
PABPC1-213ENST00000519848 DBF4Q9UBU7 674 aaPredicted RBP11.26□□□□□ -0.61
PABPC1-213ENST00000519848 POLLQ9UGP5 575 aa11.26□□□□□ -0.61
PABPC1-213ENST00000519848 IQCA1LA6NCM1 817 aa11.25□□□□□ -0.61
PABPC1-213ENST00000519848 FOXN1O15353 648 aa11.25□□□□□ -0.61
PABPC1-213ENST00000519848 RAD17O75943 681 aa11.25□□□□□ -0.61
PABPC1-213ENST00000519848 VEGFBP49765 207 aa11.25□□□□□ -0.61
PABPC1-213ENST00000519848 GMPSP49915 693 aaPredicted RBP11.25□□□□□ -0.61
PABPC1-213ENST00000519848 KIAA2012Q0VF49 1180 aa11.25□□□□□ -0.61
PABPC1-213ENST00000519848 SF3B3Q15393 1217 aaKnown RBP11.25□□□□□ -0.61
PABPC1-213ENST00000519848 CST9Q5W186 159 aa11.25□□□□□ -0.61
PABPC1-213ENST00000519848 SP8Q8IXZ3 490 aa11.25□□□□□ -0.61
PABPC1-213ENST00000519848 CCDC85AQ96PX6 553 aaPredicted RBP11.25□□□□□ -0.61
PABPC1-213ENST00000519848 MYD88Q99836 296 aa11.25□□□□□ -0.61
PABPC1-213ENST00000519848 ASTN2O75129 1339 aaPredicted RBP11.25□□□□□ -0.61
PABPC1-213ENST00000519848 CC2D2BQ6DHV5 1058 aa11.24□□□□□ -0.61
PABPC1-213ENST00000519848 NIM1KQ8IY84 436 aa11.24□□□□□ -0.61
PABPC1-213ENST00000519848 CNTROBQ8N137 903 aa11.24□□□□□ -0.61
PABPC1-213ENST00000519848 GPRC5DQ9NZD1 345 aa11.24□□□□□ -0.61
PABPC1-213ENST00000519848 IRS4O14654 1257 aaPredicted RBP11.23□□□□□ -0.61
PABPC1-213ENST00000519848 TRIM28Q13263 835 aaKnown RBP11.23□□□□□ -0.61
PABPC1-213ENST00000519848 CWF19L2Q2TBE0 894 aaKnown RBP11.23□□□□□ -0.61
PABPC1-213ENST00000519848 HSP90AB3PQ58FF7 597 aa11.23□□□□□ -0.61
PABPC1-213ENST00000519848 POTEEQ6S8J3 1075 aa11.23□□□□□ -0.61
PABPC1-213ENST00000519848 DPP8Q6V1X1 898 aaPredicted RBP11.23□□□□□ -0.61
PABPC1-213ENST00000519848 WWC1Q8IX03 1113 aa11.23□□□□□ -0.61
PABPC1-213ENST00000519848 MPNDQ8N594 471 aa11.23□□□□□ -0.61
PABPC1-213ENST00000519848 GLIS2Q9BZE0 524 aaPredicted RBP11.23□□□□□ -0.61
PABPC1-213ENST00000519848 DBNDD1Q9H9R9 158 aa11.23□□□□□ -0.61
PABPC1-213ENST00000519848 HYPKQ9NX55 129 aa11.23□□□□□ -0.61
PABPC1-213ENST00000519848 ZNRF3Q9ULT6 936 aa11.23□□□□□ -0.61
PABPC1-213ENST00000519848 POLR2AP24928 1970 aaKnown RBP11.23□□□□□ -0.61
PABPC1-213ENST00000519848 EIF6P56537 245 aaKnown RBP11.22□□□□□ -0.61
PABPC1-213ENST00000519848 JDP2Q8WYK2 163 aa11.22□□□□□ -0.61
PABPC1-213ENST00000519848 FANCIQ9NVI1 1328 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms