RNA–Protein interactions for RNA: ENST00000519624.1

AC055854.1-202, humanhuman

TSL 3

Gene AC055854.1, Length 292 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055854.1-202ENST00000519624 NBPF26B4DH59 902 aa6.59□□□□□ -1.35
AC055854.1-202ENST00000519624 DIAPH1O60610 1272 aaKnown RBP6.59□□□□□ -1.35
AC055854.1-202ENST00000519624 CAPN2P17655 700 aa6.59□□□□□ -1.35
AC055854.1-202ENST00000519624 KIF22Q14807 665 aa6.59□□□□□ -1.35
AC055854.1-202ENST00000519624 SLC10A5Q5PT55 438 aa6.59□□□□□ -1.35
AC055854.1-202ENST00000519624 NBPF10Q6P3W6 841 aaKnown RBP6.59□□□□□ -1.35
AC055854.1-202ENST00000519624 MOB2Q70IA6 237 aa6.59□□□□□ -1.35
AC055854.1-202ENST00000519624 OGFOD1Q8N543 542 aa6.59□□□□□ -1.35
AC055854.1-202ENST00000519624 RTF1Q92541 710 aaKnown RBP6.59□□□□□ -1.35
AC055854.1-202ENST00000519624 SLC10A4Q96EP9 437 aa6.59□□□□□ -1.35
AC055854.1-202ENST00000519624 LRCH3Q96II8 777 aa6.59□□□□□ -1.35
AC055854.1-202ENST00000519624 UTP14AQ9BVJ6 771 aaKnown RBP6.59□□□□□ -1.35
AC055854.1-202ENST00000519624 ZC3H12CQ9C0D7 883 aaKnown RBP6.59□□□□□ -1.35
AC055854.1-202ENST00000519624 MYOZ2Q9NPC6 264 aa6.59□□□□□ -1.35
AC055854.1-202ENST00000519624 NSFL1CQ9UNZ2 370 aaKnown RBP6.59□□□□□ -1.35
AC055854.1-202ENST00000519624 COL6A3P12111 3177 aa6.59□□□□□ -1.35
AC055854.1-202ENST00000519624 CEMIPQ8WUJ3 1361 aa6.58□□□□□ -1.36
AC055854.1-202ENST00000519624 UBN2Q6ZU65 1347 aa6.58□□□□□ -1.36
AC055854.1-202ENST00000519624 BRCA2P51587 3418 aa6.58□□□□□ -1.36
AC055854.1-202ENST00000519624 RIMBP2O15034 1052 aa6.58□□□□□ -1.36
AC055854.1-202ENST00000519624 GNRH1P01148 92 aa6.58□□□□□ -1.36
AC055854.1-202ENST00000519624 USP17L8P0C7I0 530 aa6.58□□□□□ -1.36
AC055854.1-202ENST00000519624 MMP14P50281 582 aa6.58□□□□□ -1.36
AC055854.1-202ENST00000519624 PRMT2P55345 433 aa6.58□□□□□ -1.36
AC055854.1-202ENST00000519624 PTPN12Q05209 780 aaKnown RBP6.58□□□□□ -1.36
AC055854.1-202ENST00000519624 CRHR2Q13324 411 aa6.58□□□□□ -1.36
AC055854.1-202ENST00000519624 GIGYF2Q6Y7W6 1299 aaKnown RBP6.58□□□□□ -1.36
AC055854.1-202ENST00000519624 ZNF34Q8IZ26 560 aa6.58□□□□□ -1.36
AC055854.1-202ENST00000519624 NGEFQ8N5V2 710 aa6.58□□□□□ -1.36
AC055854.1-202ENST00000519624 SYMPKQ92797 1274 aaKnown RBP6.58□□□□□ -1.36
AC055854.1-202ENST00000519624 PTCH2Q9Y6C5 1203 aa6.58□□□□□ -1.36
AC055854.1-202ENST00000519624 HTTP42858 3142 aa6.58□□□□□ -1.36
AC055854.1-202ENST00000519624 ASTN2O75129 1339 aaPredicted RBP6.57□□□□□ -1.36
AC055854.1-202ENST00000519624 WTIPA6NIX2 430 aaPredicted RBP6.57□□□□□ -1.36
AC055854.1-202ENST00000519624 ZBTB7BO15156 539 aaPredicted RBP6.57□□□□□ -1.36
AC055854.1-202ENST00000519624 KCNQ3O43525 872 aa6.57□□□□□ -1.36
AC055854.1-202ENST00000519624 PPP1R12BO60237 982 aaPredicted RBP6.57□□□□□ -1.36
AC055854.1-202ENST00000519624 EVI5O60447 810 aa6.57□□□□□ -1.36
AC055854.1-202ENST00000519624 MYCP01106 439 aaPredicted RBP6.57□□□□□ -1.36
AC055854.1-202ENST00000519624 CENPBP07199 599 aaPredicted RBP6.57□□□□□ -1.36
AC055854.1-202ENST00000519624 COL9A1P20849 921 aa6.57□□□□□ -1.36
AC055854.1-202ENST00000519624 DOK7Q18PE1 504 aa6.57□□□□□ -1.36
AC055854.1-202ENST00000519624 RSBN1LQ6PCB5 846 aaPredicted RBP6.57□□□□□ -1.36
AC055854.1-202ENST00000519624 C3orf67Q6ZVT6 689 aa6.57□□□□□ -1.36
AC055854.1-202ENST00000519624 SLC51AQ86UW1 340 aa6.57□□□□□ -1.36
AC055854.1-202ENST00000519624 APOBEC3FQ8IUX4 373 aaKnown RBP6.57□□□□□ -1.36
AC055854.1-202ENST00000519624 ZBTB3Q9H5J0 574 aa6.57□□□□□ -1.36
AC055854.1-202ENST00000519624 ANGEL1Q9UNK9 670 aaKnown RBP6.57□□□□□ -1.36
AC055854.1-202ENST00000519624 RTL9Q8NET4 1388 aa6.57□□□□□ -1.36
AC055854.1-202ENST00000519624 IGF2BP3O00425 579 aaKnown RBP eCLIP6.56□□□□□ -1.36
AC055854.1-202ENST00000519624 SOX1O00570 391 aaPredicted RBP6.56□□□□□ -1.36
AC055854.1-202ENST00000519624 BMP8BP34820 402 aa6.56□□□□□ -1.36
AC055854.1-202ENST00000519624 PRKG1Q13976 671 aa6.56□□□□□ -1.36
AC055854.1-202ENST00000519624 HSP90AB3PQ58FF7 597 aa6.56□□□□□ -1.36
AC055854.1-202ENST00000519624 LDLRAD1Q5T700 205 aa6.56□□□□□ -1.36
AC055854.1-202ENST00000519624 PRAMEF18Q5VWM3 479 aa6.56□□□□□ -1.36
AC055854.1-202ENST00000519624 FAM122AQ96E09 287 aa6.56□□□□□ -1.36
AC055854.1-202ENST00000519624 PANK3Q9H999 370 aa6.56□□□□□ -1.36
AC055854.1-202ENST00000519624 ZFYVE28Q9HCC9 887 aa6.56□□□□□ -1.36
AC055854.1-202ENST00000519624 MTMR10Q9NXD2 777 aa6.56□□□□□ -1.36
AC055854.1-202ENST00000519624 KNSTRNQ9Y448 316 aa6.56□□□□□ -1.36
AC055854.1-202ENST00000519624 CENPFP49454 3210 aa6.56□□□□□ -1.36
AC055854.1-202ENST00000519624 ERBB4Q15303 1308 aa6.55□□□□□ -1.36
AC055854.1-202ENST00000519624 MYL6BP14649 208 aa6.55□□□□□ -1.36
AC055854.1-202ENST00000519624 PLA2G5P39877 138 aa6.55□□□□□ -1.36
AC055854.1-202ENST00000519624 GJA8P48165 433 aa6.55□□□□□ -1.36
AC055854.1-202ENST00000519624 UBXN2AP68543 259 aa6.55□□□□□ -1.36
AC055854.1-202ENST00000519624 LRIT3Q3SXY7 679 aa6.55□□□□□ -1.36
AC055854.1-202ENST00000519624 SH3TC2Q8TF17 1288 aa6.55□□□□□ -1.36
AC055854.1-202ENST00000519624 WNK4Q96J92 1243 aa6.55□□□□□ -1.36
AC055854.1-202ENST00000519624 KCNQ5Q9NR82 932 aa6.55□□□□□ -1.36
AC055854.1-202ENST00000519624 STAP2Q9UGK3 403 aa6.55□□□□□ -1.36
AC055854.1-202ENST00000519624 RRP7AQ9Y3A4 280 aaKnown RBP6.55□□□□□ -1.36
AC055854.1-202ENST00000519624 COL1A1P02452 1464 aaPredicted RBP6.54□□□□□ -1.36
AC055854.1-202ENST00000519624 RPTORQ8N122 1335 aa6.54□□□□□ -1.36
AC055854.1-202ENST00000519624 SH3TC1Q8TE82 1336 aa6.54□□□□□ -1.36
AC055854.1-202ENST00000519624 MYO3BQ8WXR4 1341 aa6.54□□□□□ -1.36
AC055854.1-202ENST00000519624 CLSPNQ9HAW4 1339 aa6.54□□□□□ -1.36
AC055854.1-202ENST00000519624 USP17L3A6NCW0 530 aa6.54□□□□□ -1.36
AC055854.1-202ENST00000519624 USP17L4A6NCW7 530 aa6.54□□□□□ -1.36
AC055854.1-202ENST00000519624 U2SURPO15042 1029 aaKnown RBP6.54□□□□□ -1.36
AC055854.1-202ENST00000519624 FARP2O94887 1054 aaPredicted RBP6.54□□□□□ -1.36
AC055854.1-202ENST00000519624 GJB1P08034 283 aa6.54□□□□□ -1.36
AC055854.1-202ENST00000519624 HOXD10P28358 340 aa6.54□□□□□ -1.36
AC055854.1-202ENST00000519624 MAP3K11Q16584 847 aa6.54□□□□□ -1.36
AC055854.1-202ENST00000519624 SUPT20HL1Q3ZLR7 823 aa6.54□□□□□ -1.36
AC055854.1-202ENST00000519624 TTLL7Q6ZT98 887 aa6.54□□□□□ -1.36
AC055854.1-202ENST00000519624 USP17L1Q7RTZ2 530 aa6.54□□□□□ -1.36
AC055854.1-202ENST00000519624 PODNQ7Z5L7 613 aa6.54□□□□□ -1.36
AC055854.1-202ENST00000519624 HELBQ8NG08 1087 aaPredicted RBP6.54□□□□□ -1.36
AC055854.1-202ENST00000519624 TBC1D16Q8TBP0 767 aa6.54□□□□□ -1.36
AC055854.1-202ENST00000519624 PNISRQ8TF01 805 aaKnown RBP6.54□□□□□ -1.36
AC055854.1-202ENST00000519624 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.54□□□□□ -1.36
AC055854.1-202ENST00000519624 POLLQ9UGP5 575 aa6.54□□□□□ -1.36
AC055854.1-202ENST00000519624 TRMT112Q9UI30 125 aaKnown RBP6.54□□□□□ -1.36
AC055854.1-202ENST00000519624 PPP2R3BQ9Y5P8 575 aa6.54□□□□□ -1.36
AC055854.1-202ENST00000519624 GTF3C3Q9Y5Q9 886 aa6.54□□□□□ -1.36
AC055854.1-202ENST00000519624 TESPA1A2RU30 521 aaPredicted RBP6.53□□□□□ -1.36
AC055854.1-202ENST00000519624 WNT10BO00744 389 aa6.53□□□□□ -1.36
AC055854.1-202ENST00000519624 UFL1O94874 794 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms