RNA–Protein interactions for RNA: ENST00000519259.5

SREK1-206, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 2

Gene SREK1, Length 9,353 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-206	ENST00000519259	TSPOAP1	O95153	1857 aa		4.6	□□□□□ -1.67
SREK1-206	ENST00000519259	INHBE	P58166	350 aa		4.59	□□□□□ -1.67
SREK1-206	ENST00000519259	ADARB2	Q9NS39	739 aa	Known RBP	4.59	□□□□□ -1.67
SREK1-206	ENST00000519259	GJA3	Q9Y6H8	435 aa		4.59	□□□□□ -1.67
SREK1-206	ENST00000519259	YY1	P25490	414 aa		4.59	□□□□□ -1.67
SREK1-206	ENST00000519259	COPB2	P35606	906 aa		4.59	□□□□□ -1.67
SREK1-206	ENST00000519259	PRMT2	P55345	433 aa		4.59	□□□□□ -1.67
SREK1-206	ENST00000519259	FGD1	P98174	961 aa		4.59	□□□□□ -1.67
SREK1-206	ENST00000519259	STRIP1	Q5VSL9	837 aa		4.59	□□□□□ -1.67
SREK1-206	ENST00000519259	FHDC1	Q9C0D6	1143 aa	Predicted RBP	4.59	□□□□□ -1.67
SREK1-206	ENST00000519259	ZNF219	Q9P2Y4	722 aa	Predicted RBP	4.59	□□□□□ -1.67
SREK1-206	ENST00000519259	ZNF804B	A4D1E1	1349 aa		4.59	□□□□□ -1.67
SREK1-206	ENST00000519259	TTLL11	Q8NHH1	800 aa		4.59	□□□□□ -1.67
SREK1-206	ENST00000519259	TEKT1	Q969V4	418 aa		4.59	□□□□□ -1.67
SREK1-206	ENST00000519259	AIDA	Q96BJ3	306 aa		4.59	□□□□□ -1.67
SREK1-206	ENST00000519259	PHAX	Q9H814	394 aa	Known RBP	4.59	□□□□□ -1.67
SREK1-206	ENST00000519259	CEP152	O94986	1710 aa		4.59	□□□□□ -1.67
SREK1-206	ENST00000519259	REC8	O95072	547 aa		4.59	□□□□□ -1.67
SREK1-206	ENST00000519259	PC	P11498	1178 aa	Known RBP	4.59	□□□□□ -1.67
SREK1-206	ENST00000519259	ZNF827	Q17R98	1081 aa		4.59	□□□□□ -1.67
SREK1-206	ENST00000519259	SMC1B	Q8NDV3	1235 aa		4.59	□□□□□ -1.67
SREK1-206	ENST00000519259	DHX36	Q9H2U1	1008 aa	Known RBP	4.59	□□□□□ -1.67
SREK1-206	ENST00000519259	UBR1	Q8IWV7	1749 aa		4.59	□□□□□ -1.67
SREK1-206	ENST00000519259	PDE8B	O95263	885 aa		4.59	□□□□□ -1.67
SREK1-206	ENST00000519259	RABL6	Q3YEC7	729 aa	Predicted RBP	4.59	□□□□□ -1.67
SREK1-206	ENST00000519259	CSAD	Q9Y600	493 aa		4.59	□□□□□ -1.67
SREK1-206	ENST00000519259	CAMTA1	Q9Y6Y1	1673 aa		4.59	□□□□□ -1.67
SREK1-206	ENST00000519259	LRP6	O75581	1613 aa		4.59	□□□□□ -1.68
SREK1-206	ENST00000519259	NBPF26	B4DH59	902 aa		4.59	□□□□□ -1.68
SREK1-206	ENST00000519259	CA12	O43570	354 aa		4.59	□□□□□ -1.68
SREK1-206	ENST00000519259	MSL1	Q68DK7	614 aa		4.59	□□□□□ -1.68
SREK1-206	ENST00000519259	NBPF10	Q6P3W6	841 aa	Known RBP	4.59	□□□□□ -1.68
SREK1-206	ENST00000519259	NBPF15	Q8N660	670 aa		4.59	□□□□□ -1.68
SREK1-206	ENST00000519259	FSD1	Q9BTV5	496 aa		4.59	□□□□□ -1.68
SREK1-206	ENST00000519259	USP5	P45974	858 aa		4.59	□□□□□ -1.68
SREK1-206	ENST00000519259	ABCC12	Q96J65	1359 aa		4.59	□□□□□ -1.68
SREK1-206	ENST00000519259	MEGF6	O75095	1541 aa		4.58	□□□□□ -1.68
SREK1-206	ENST00000519259	GNAQ	P50148	359 aa		4.58	□□□□□ -1.68
SREK1-206	ENST00000519259	NAA16	Q6N069	864 aa	Predicted RBP	4.58	□□□□□ -1.68
SREK1-206	ENST00000519259	SSH3	Q8TE77	659 aa		4.58	□□□□□ -1.68
SREK1-206	ENST00000519259	CCDC102A	Q96A19	550 aa		4.58	□□□□□ -1.68
SREK1-206	ENST00000519259	SLC5A4	Q9NY91	659 aa		4.58	□□□□□ -1.68
SREK1-206	ENST00000519259	PDS5A	Q29RF7	1337 aa	Known RBP	4.58	□□□□□ -1.68
SREK1-206	ENST00000519259	USP17L3	A6NCW0	530 aa		4.58	□□□□□ -1.68
SREK1-206	ENST00000519259	USP17L4	A6NCW7	530 aa		4.58	□□□□□ -1.68
SREK1-206	ENST00000519259	GLTPD2	A6NH11	291 aa		4.58	□□□□□ -1.68
SREK1-206	ENST00000519259	USP17L1	Q7RTZ2	530 aa		4.58	□□□□□ -1.68
SREK1-206	ENST00000519259	ZNF444	Q8N0Y2	327 aa	Predicted RBP	4.58	□□□□□ -1.68
SREK1-206	ENST00000519259	EVI5L	Q96CN4	794 aa		4.58	□□□□□ -1.68
SREK1-206	ENST00000519259	C22orf23	Q9BZE7	217 aa		4.58	□□□□□ -1.68
SREK1-206	ENST00000519259	RBM27	Q9P2N5	1060 aa	Known RBP	4.58	□□□□□ -1.68
SREK1-206	ENST00000519259		U3KPZ7	1027 aa	Predicted RBP	4.58	□□□□□ -1.68
SREK1-206	ENST00000519259	KIAA1210	Q9ULL0	1709 aa		4.58	□□□□□ -1.68
SREK1-206	ENST00000519259	PXDNL	A1KZ92	1463 aa		4.58	□□□□□ -1.68
SREK1-206	ENST00000519259	C21orf2	O43822	256 aa		4.58	□□□□□ -1.68
SREK1-206	ENST00000519259	TTLL12	Q14166	644 aa	Predicted RBP	4.58	□□□□□ -1.68
SREK1-206	ENST00000519259	CCDC34	Q96HJ3	373 aa		4.58	□□□□□ -1.68
SREK1-206	ENST00000519259	AOX1	Q06278	1338 aa		4.58	□□□□□ -1.68
SREK1-206	ENST00000519259	HCLS1	P14317	486 aa	Predicted RBP	4.58	□□□□□ -1.68
SREK1-206	ENST00000519259	CHADL	Q6NUI6	762 aa		4.58	□□□□□ -1.68
SREK1-206	ENST00000519259	PRPF40B	Q6NWY9	871 aa	Known RBP	4.58	□□□□□ -1.68
SREK1-206	ENST00000519259	RALYL	Q86SE5	291 aa	Known RBP	4.58	□□□□□ -1.68
SREK1-206	ENST00000519259	GPC2	Q8N158	579 aa		4.58	□□□□□ -1.68
SREK1-206	ENST00000519259	TMTC2	Q8N394	836 aa		4.58	□□□□□ -1.68
SREK1-206	ENST00000519259	RBM46	Q8TBY0	533 aa	Known RBP	4.58	□□□□□ -1.68
SREK1-206	ENST00000519259	XRN1	Q8IZH2	1706 aa	Known RBP	4.58	□□□□□ -1.68
SREK1-206	ENST00000519259	PSMA5	P28066	241 aa		4.58	□□□□□ -1.68
SREK1-206	ENST00000519259	ZNF341	Q9BYN7	854 aa		4.58	□□□□□ -1.68
SREK1-206	ENST00000519259	ZNF521	Q96K83	1311 aa		4.58	□□□□□ -1.68
SREK1-206	ENST00000519259	KLRG2	A4D1S0	409 aa	Predicted RBP	4.58	□□□□□ -1.68
SREK1-206	ENST00000519259	POLR3D	P05423	398 aa	Predicted RBP	4.58	□□□□□ -1.68
SREK1-206	ENST00000519259	USP14	P54578	494 aa		4.58	□□□□□ -1.68
SREK1-206	ENST00000519259	ANKRD45	Q5TZF3	282 aa		4.58	□□□□□ -1.68
SREK1-206	ENST00000519259	TCEAL9	Q9UHQ7	104 aa		4.58	□□□□□ -1.68
SREK1-206	ENST00000519259	HDAC1	Q13547	482 aa	Predicted RBP	4.58	□□□□□ -1.68
SREK1-206	ENST00000519259	ANXA1	P04083	346 aa		4.58	□□□□□ -1.68
SREK1-206	ENST00000519259	TSPYL6	Q8N831	410 aa		4.58	□□□□□ -1.68
SREK1-206	ENST00000519259	EHMT1	Q9H9B1	1298 aa		4.58	□□□□□ -1.68
SREK1-206	ENST00000519259	IREB2	P48200	963 aa	Known RBP	4.57	□□□□□ -1.68
SREK1-206	ENST00000519259	UBE3C	Q15386	1083 aa		4.57	□□□□□ -1.68
SREK1-206	ENST00000519259	FKBP1C	Q5VVH2	108 aa		4.57	□□□□□ -1.68
SREK1-206	ENST00000519259	C9orf131	Q5VYM1	1079 aa		4.57	□□□□□ -1.68
SREK1-206	ENST00000519259	CD209	Q9NNX6	404 aa		4.57	□□□□□ -1.68
SREK1-206	ENST00000519259	ABCF2	Q9UG63	623 aa		4.57	□□□□□ -1.68
SREK1-206	ENST00000519259	HMGB1	P09429	215 aa	Known RBP	4.57	□□□□□ -1.68
SREK1-206	ENST00000519259	HOXD10	P28358	340 aa		4.57	□□□□□ -1.68
SREK1-206	ENST00000519259	AKAP17A	Q02040	695 aa	Known RBP	4.57	□□□□□ -1.68
SREK1-206	ENST00000519259	CHRND	Q07001	517 aa		4.57	□□□□□ -1.68
SREK1-206	ENST00000519259	TBC1D9B	Q66K14	1250 aa		4.57	□□□□□ -1.68
SREK1-206	ENST00000519259	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	4.57	□□□□□ -1.68
SREK1-206	ENST00000519259	DCTPP1	Q9H773	170 aa		4.57	□□□□□ -1.68
SREK1-206	ENST00000519259	TTLL5	Q6EMB2	1281 aa		4.57	□□□□□ -1.68
SREK1-206	ENST00000519259	CDCA7L	Q96GN5	454 aa		4.57	□□□□□ -1.68
SREK1-206	ENST00000519259	TOMM22	Q9NS69	142 aa		4.57	□□□□□ -1.68
SREK1-206	ENST00000519259	ABCC4	O15439	1325 aa		4.57	□□□□□ -1.68
SREK1-206	ENST00000519259	USP17L8	P0C7I0	530 aa		4.57	□□□□□ -1.68
SREK1-206	ENST00000519259	CCNA1	P78396	465 aa		4.57	□□□□□ -1.68
SREK1-206	ENST00000519259	PDE4B	Q07343	736 aa		4.57	□□□□□ -1.68
SREK1-206	ENST00000519259	NAP1L4	Q99733	375 aa	Known RBP	4.57	□□□□□ -1.68
SREK1-206	ENST00000519259	MTA3	Q9BTC8	594 aa		4.57	□□□□□ -1.68

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