RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 AACSQ86V21 672 aa17.67■□□□□ 0.42
CLN8-204ENST00000519254 CDC5LQ99459 802 aaKnown RBP17.67■□□□□ 0.42
CLN8-204ENST00000519254 DAXXQ9UER7 740 aaPredicted RBP17.67■□□□□ 0.42
CLN8-204ENST00000519254 NRXN2Q9P2S2 1712 aa17.67■□□□□ 0.42
CLN8-204ENST00000519254 LRP5O75197 1615 aa17.66■□□□□ 0.42
CLN8-204ENST00000519254 RIC1Q4ADV7 1423 aa17.66■□□□□ 0.42
CLN8-204ENST00000519254 TTC41PQ6P2S7 1318 aa17.66■□□□□ 0.42
CLN8-204ENST00000519254 PSDA5PKW4 1024 aaPredicted RBP17.66■□□□□ 0.42
CLN8-204ENST00000519254 TRIM6-TRIM34B2RNG4 842 aa17.66■□□□□ 0.42
CLN8-204ENST00000519254 ZBTB7AO95365 584 aa17.66■□□□□ 0.42
CLN8-204ENST00000519254 IFIT2P09913 472 aaKnown RBP17.66■□□□□ 0.42
CLN8-204ENST00000519254 METTL24Q5JXM2 366 aa17.66■□□□□ 0.42
CLN8-204ENST00000519254 DDX46Q7L014 1031 aaKnown RBP17.66■□□□□ 0.42
CLN8-204ENST00000519254 ANKRD18AQ8IVF6 992 aa17.66■□□□□ 0.42
CLN8-204ENST00000519254 RPGRQ92834 1020 aaKnown RBP17.66■□□□□ 0.42
CLN8-204ENST00000519254 EAF2Q96CJ1 260 aaPredicted RBP17.66■□□□□ 0.42
CLN8-204ENST00000519254 KIF2CQ99661 725 aa17.66■□□□□ 0.42
CLN8-204ENST00000519254 BECN1Q14457 450 aa17.65■□□□□ 0.42
CLN8-204ENST00000519254 SLC16A10Q8TF71 515 aa17.65■□□□□ 0.42
CLN8-204ENST00000519254 CELF1Q92879 486 aaKnown RBP17.65■□□□□ 0.42
CLN8-204ENST00000519254 RILPL2Q969X0 211 aa17.65■□□□□ 0.42
CLN8-204ENST00000519254 ANP32EQ9BTT0 268 aa17.65■□□□□ 0.42
CLN8-204ENST00000519254 USP26Q9BXU7 913 aa17.65■□□□□ 0.42
CLN8-204ENST00000519254 CEP126Q9P2H0 1117 aa17.65■□□□□ 0.42
CLN8-204ENST00000519254 FBXO3Q9UK99 471 aa17.65■□□□□ 0.42
CLN8-204ENST00000519254 ANKRD31Q8N7Z5 1873 aa17.64■□□□□ 0.41
CLN8-204ENST00000519254 CHMLP26374 656 aa17.64■□□□□ 0.41
CLN8-204ENST00000519254 TNNI3KQ59H18 835 aa17.64■□□□□ 0.41
CLN8-204ENST00000519254 CCDC8Q9H0W5 538 aaPredicted RBP17.64■□□□□ 0.41
CLN8-204ENST00000519254 RIPOR2Q9Y4F9 1068 aa17.64■□□□□ 0.41
CLN8-204ENST00000519254 FPGT-TNNI3KV9GXZ4 949 aa17.64■□□□□ 0.41
CLN8-204ENST00000519254 BRIP1Q9BX63 1249 aa17.63■□□□□ 0.41
CLN8-204ENST00000519254 TBC1D2Q9BYX2 928 aa17.63■□□□□ 0.41
CLN8-204ENST00000519254 ECHDC1Q9NTX5 307 aa17.63■□□□□ 0.41
CLN8-204ENST00000519254 TLR7Q9NYK1 1049 aaKnown RBP17.63■□□□□ 0.41
CLN8-204ENST00000519254 ERC2O15083 957 aa17.63■□□□□ 0.41
CLN8-204ENST00000519254 CRY2Q49AN0 593 aa17.63■□□□□ 0.41
CLN8-204ENST00000519254 HELBQ8NG08 1087 aaPredicted RBP17.63■□□□□ 0.41
CLN8-204ENST00000519254 GLRX3O76003 335 aaKnown RBP17.62■□□□□ 0.41
CLN8-204ENST00000519254 MAP4K4O95819 1239 aaPredicted RBP17.62■□□□□ 0.41
CLN8-204ENST00000519254 NEUROD6Q96NK8 337 aa17.62■□□□□ 0.41
CLN8-204ENST00000519254 ATF5Q9Y2D1 282 aaPredicted RBP17.62■□□□□ 0.41
CLN8-204ENST00000519254 ZNF609O15014 1411 aa17.62■□□□□ 0.41
CLN8-204ENST00000519254 RPS8P62241 208 aaKnown RBP17.61■□□□□ 0.41
CLN8-204ENST00000519254 RBM17Q96I25 401 aaKnown RBP17.61■□□□□ 0.41
CLN8-204ENST00000519254 ESYT1Q9BSJ8 1104 aa17.61■□□□□ 0.41
CLN8-204ENST00000519254 MROH5Q6ZUA9 1318 aa17.61■□□□□ 0.41
CLN8-204ENST00000519254 REC8O95072 547 aa17.61■□□□□ 0.41
CLN8-204ENST00000519254 PDE6BP35913 854 aa17.61■□□□□ 0.41
CLN8-204ENST00000519254 GRAPQ13588 217 aa17.61■□□□□ 0.41
CLN8-204ENST00000519254 GRAPLQ8TC17 118 aaPredicted RBP17.61■□□□□ 0.41
CLN8-204ENST00000519254 GPATCH3Q96I76 525 aa17.61■□□□□ 0.41
CLN8-204ENST00000519254 TAF5LO75529 589 aa17.6■□□□□ 0.41
CLN8-204ENST00000519254 TIMM10P62072 90 aa17.6■□□□□ 0.41
CLN8-204ENST00000519254 BSDC1Q9NW68 430 aaPredicted RBP17.6■□□□□ 0.41
CLN8-204ENST00000519254 A0A1B0GUL7 405 aa17.59■□□□□ 0.41
CLN8-204ENST00000519254 CHRNDQ07001 517 aa17.59■□□□□ 0.41
CLN8-204ENST00000519254 CNTROBQ8N137 903 aa17.59■□□□□ 0.41
CLN8-204ENST00000519254 VGLL2Q8N8G2 317 aa17.59■□□□□ 0.41
CLN8-204ENST00000519254 DBNDD2Q9BQY9 259 aa17.59■□□□□ 0.41
CLN8-204ENST00000519254 MTFR1LQ9H019 292 aa17.59■□□□□ 0.41
CLN8-204ENST00000519254 GPR108Q9NPR9 543 aa17.59■□□□□ 0.41
CLN8-204ENST00000519254 DBNLQ9UJU6 430 aaKnown RBP17.59■□□□□ 0.41
CLN8-204ENST00000519254 AKAP2Q9Y2D5 859 aa17.59■□□□□ 0.41
CLN8-204ENST00000519254 COL11A2P13942 1736 aaPredicted RBP17.59■□□□□ 0.41
CLN8-204ENST00000519254 KLRG2A4D1S0 409 aaPredicted RBP17.58■□□□□ 0.41
CLN8-204ENST00000519254 PDE8BO95263 885 aa17.58■□□□□ 0.41
CLN8-204ENST00000519254 ATP2B3Q16720 1220 aa17.58■□□□□ 0.41
CLN8-204ENST00000519254 SLC51AQ86UW1 340 aa17.58■□□□□ 0.4
CLN8-204ENST00000519254 C2CD5Q86YS7 1000 aa17.58■□□□□ 0.4
CLN8-204ENST00000519254 MINPP1Q9UNW1 487 aa17.58■□□□□ 0.4
CLN8-204ENST00000519254 SNAP23O00161 211 aa17.57■□□□□ 0.4
CLN8-204ENST00000519254 SRGNP10124 158 aa17.57■□□□□ 0.4
CLN8-204ENST00000519254 POLD1P28340 1107 aa17.57■□□□□ 0.4
CLN8-204ENST00000519254 HOXA10P31260 410 aaPredicted RBP17.57■□□□□ 0.4
CLN8-204ENST00000519254 PUM3Q15397 648 aaKnown RBP17.57■□□□□ 0.4
CLN8-204ENST00000519254 SNX21Q969T3 373 aa17.57■□□□□ 0.4
CLN8-204ENST00000519254 NPR1P16066 1061 aa17.56■□□□□ 0.4
CLN8-204ENST00000519254 ADORA1P30542 326 aa17.56■□□□□ 0.4
CLN8-204ENST00000519254 GORABQ5T7V8 394 aa17.56■□□□□ 0.4
CLN8-204ENST00000519254 ZNF622Q969S3 477 aaKnown RBP eCLIP17.56■□□□□ 0.4
CLN8-204ENST00000519254 IL25Q9H293 177 aa17.56■□□□□ 0.4
CLN8-204ENST00000519254 CHRNA5P30532 468 aa17.56■□□□□ 0.4
CLN8-204ENST00000519254 XAGE2Q96GT9 111 aa17.56■□□□□ 0.4
CLN8-204ENST00000519254 CRAMP1Q96RY5 1269 aa17.56■□□□□ 0.4
CLN8-204ENST00000519254 A0A1B0GUL6 1792 aa17.55■□□□□ 0.4
CLN8-204ENST00000519254 C10orf71Q711Q0 1435 aa17.55■□□□□ 0.4
CLN8-204ENST00000519254 H0YIN7 160 aa17.55■□□□□ 0.4
CLN8-204ENST00000519254 MASTLQ96GX5 879 aa17.55■□□□□ 0.4
CLN8-204ENST00000519254 SLC5A1P13866 664 aa17.54■□□□□ 0.4
CLN8-204ENST00000519254 EVI5LQ96CN4 794 aa17.54■□□□□ 0.4
CLN8-204ENST00000519254 PPEF1O14829 653 aaPredicted RBP17.53■□□□□ 0.4
CLN8-204ENST00000519254 KCNJ4P48050 445 aa17.53■□□□□ 0.4
CLN8-204ENST00000519254 LPIN2Q92539 896 aa17.53■□□□□ 0.4
CLN8-204ENST00000519254 BOLA2Q9H3K6 86 aa17.53■□□□□ 0.4
CLN8-204ENST00000519254 ANKIB1Q9P2G1 1089 aa17.53■□□□□ 0.4
CLN8-204ENST00000519254 CACNA1SQ13698 1873 aa17.53■□□□□ 0.4
CLN8-204ENST00000519254 WTIPA6NIX2 430 aaPredicted RBP17.53■□□□□ 0.4
CLN8-204ENST00000519254 SGSM2O43147 1006 aa17.53■□□□□ 0.4
CLN8-204ENST00000519254 BBOX1O75936 387 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms