RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 QSER1Q2KHR3 1735 aa18.3■□□□□ 0.52
TRAPPC9-205ENST00000518839 ATP2B3Q16720 1220 aa18.3■□□□□ 0.52
TRAPPC9-205ENST00000518839 CCDC158Q5M9N0 1113 aa18.3■□□□□ 0.52
TRAPPC9-205ENST00000518839 ESYT1Q9BSJ8 1104 aa18.3■□□□□ 0.52
TRAPPC9-205ENST00000518839 BOLA2Q9H3K6 86 aa18.3■□□□□ 0.52
TRAPPC9-205ENST00000518839 TFCP2L1Q9NZI6 479 aa18.3■□□□□ 0.52
TRAPPC9-205ENST00000518839 PDE8BO95263 885 aa18.29■□□□□ 0.52
TRAPPC9-205ENST00000518839 MAP4K4O95819 1239 aaPredicted RBP18.29■□□□□ 0.52
TRAPPC9-205ENST00000518839 GORABQ5T7V8 394 aa18.29■□□□□ 0.52
TRAPPC9-205ENST00000518839 ANKRD18AQ8IVF6 992 aa18.29■□□□□ 0.52
TRAPPC9-205ENST00000518839 VGLL2Q8N8G2 317 aa18.29■□□□□ 0.52
TRAPPC9-205ENST00000518839 CNBD1Q8NA66 436 aa18.29■□□□□ 0.52
TRAPPC9-205ENST00000518839 HAUS7Q99871 368 aa18.29■□□□□ 0.52
TRAPPC9-205ENST00000518839 A0A1B0GUL6 1792 aa18.29■□□□□ 0.52
TRAPPC9-205ENST00000518839 TIMM10P62072 90 aa18.28■□□□□ 0.52
TRAPPC9-205ENST00000518839 PUM3Q15397 648 aaKnown RBP18.28■□□□□ 0.52
TRAPPC9-205ENST00000518839 SEC31BQ9NQW1 1179 aa18.28■□□□□ 0.52
TRAPPC9-205ENST00000518839 DIAPH3Q9NSV4 1193 aa18.28■□□□□ 0.52
TRAPPC9-205ENST00000518839 TM4SF1P30408 202 aa18.27■□□□□ 0.52
TRAPPC9-205ENST00000518839 ST5P78524 1137 aa18.27■□□□□ 0.52
TRAPPC9-205ENST00000518839 ZNF827Q17R98 1081 aa18.27■□□□□ 0.52
TRAPPC9-205ENST00000518839 LPIN2Q92539 896 aa18.27■□□□□ 0.52
TRAPPC9-205ENST00000518839 XAGE2Q96GT9 111 aa18.27■□□□□ 0.52
TRAPPC9-205ENST00000518839 USP26Q9BXU7 913 aa18.27■□□□□ 0.52
TRAPPC9-205ENST00000518839 RAD50Q92878 1312 aa18.26■□□□□ 0.51
TRAPPC9-205ENST00000518839 TNRC6CQ9HCJ0 1690 aaKnown RBP18.26■□□□□ 0.51
TRAPPC9-205ENST00000518839 SLC5A1P13866 664 aa18.26■□□□□ 0.51
TRAPPC9-205ENST00000518839 SF3B2Q13435 895 aaKnown RBP18.26■□□□□ 0.51
TRAPPC9-205ENST00000518839 BECN1Q14457 450 aa18.26■□□□□ 0.51
TRAPPC9-205ENST00000518839 TTC39AQ5SRH9 613 aa18.26■□□□□ 0.51
TRAPPC9-205ENST00000518839 NLGN1Q8N2Q7 840 aa18.26■□□□□ 0.51
TRAPPC9-205ENST00000518839 ZNF512BQ96KM6 892 aaPredicted RBP18.26■□□□□ 0.51
TRAPPC9-205ENST00000518839 FSD1Q9BTV5 496 aa18.26■□□□□ 0.51
TRAPPC9-205ENST00000518839 BSDC1Q9NW68 430 aaPredicted RBP18.26■□□□□ 0.51
TRAPPC9-205ENST00000518839 IFIT1P09914 478 aaKnown RBP18.25■□□□□ 0.51
TRAPPC9-205ENST00000518839 MCCP23508 829 aa18.25■□□□□ 0.51
TRAPPC9-205ENST00000518839 DAXXQ9UER7 740 aaPredicted RBP18.25■□□□□ 0.51
TRAPPC9-205ENST00000518839 NRXN2Q9P2S2 1712 aa18.24■□□□□ 0.51
TRAPPC9-205ENST00000518839 SGSM2O43147 1006 aa18.24■□□□□ 0.51
TRAPPC9-205ENST00000518839 SERPINB2P05120 415 aa18.24■□□□□ 0.51
TRAPPC9-205ENST00000518839 FGFR2P21802 821 aa18.24■□□□□ 0.51
TRAPPC9-205ENST00000518839 LRRFIP1Q32MZ4 808 aaKnown RBP18.24■□□□□ 0.51
TRAPPC9-205ENST00000518839 DDX46Q7L014 1031 aaKnown RBP18.24■□□□□ 0.51
TRAPPC9-205ENST00000518839 TAF1P21675 1872 aa18.23■□□□□ 0.51
TRAPPC9-205ENST00000518839 UQCRFS1P1P0C7P4 283 aa18.23■□□□□ 0.51
TRAPPC9-205ENST00000518839 BAG6P46379 1132 aa18.23■□□□□ 0.51
TRAPPC9-205ENST00000518839 PRR5LQ6MZQ0 368 aa18.23■□□□□ 0.51
TRAPPC9-205ENST00000518839 KIAA1211Q6ZU35 1233 aa18.23■□□□□ 0.51
TRAPPC9-205ENST00000518839 C3orf67Q6ZVT6 689 aa18.23■□□□□ 0.51
TRAPPC9-205ENST00000518839 COL23A1Q86Y22 540 aaPredicted RBP18.23■□□□□ 0.51
TRAPPC9-205ENST00000518839 CAMKK2Q96RR4 588 aa18.23■□□□□ 0.51
TRAPPC9-205ENST00000518839 DNAJC2Q99543 621 aaKnown RBP18.23■□□□□ 0.51
TRAPPC9-205ENST00000518839 MYH7P12883 1935 aa18.22■□□□□ 0.51
TRAPPC9-205ENST00000518839 RPS8P62241 208 aaKnown RBP18.22■□□□□ 0.51
TRAPPC9-205ENST00000518839 CHRNDQ07001 517 aa18.22■□□□□ 0.51
TRAPPC9-205ENST00000518839 KBTBD3Q8NAB2 608 aa18.22■□□□□ 0.51
TRAPPC9-205ENST00000518839 ANO2Q9NQ90 1003 aa18.22■□□□□ 0.51
TRAPPC9-205ENST00000518839 PAG1Q9NWQ8 432 aa18.22■□□□□ 0.51
TRAPPC9-205ENST00000518839 STK32BQ9NY57 414 aa18.22■□□□□ 0.51
TRAPPC9-205ENST00000518839 AKAP11Q9UKA4 1901 aa18.21■□□□□ 0.51
TRAPPC9-205ENST00000518839 POLRMTO00411 1230 aaKnown RBP18.21■□□□□ 0.51
TRAPPC9-205ENST00000518839 MSH5O43196 834 aa18.21■□□□□ 0.51
TRAPPC9-205ENST00000518839 ADORA1P30542 326 aa18.21■□□□□ 0.51
TRAPPC9-205ENST00000518839 CWC27Q6UX04 472 aaKnown RBP18.21■□□□□ 0.51
TRAPPC9-205ENST00000518839 IL27Q8NEV9 243 aa18.21■□□□□ 0.51
TRAPPC9-205ENST00000518839 ANKRD2Q9GZV1 360 aa18.21■□□□□ 0.51
TRAPPC9-205ENST00000518839 UBE4AQ14139 1066 aa18.2■□□□□ 0.5
TRAPPC9-205ENST00000518839 EZH2Q15910 746 aaKnown RBP18.2■□□□□ 0.5
TRAPPC9-205ENST00000518839 SNRKQ9NRH2 765 aa18.2■□□□□ 0.5
TRAPPC9-205ENST00000518839 PNPLA7Q6ZV29 1317 aa18.2■□□□□ 0.5
TRAPPC9-205ENST00000518839 ARID4AP29374 1257 aaPredicted RBP18.19■□□□□ 0.5
TRAPPC9-205ENST00000518839 ANAPC15P60006 121 aa18.19■□□□□ 0.5
TRAPPC9-205ENST00000518839 EN1Q05925 392 aaPredicted RBP18.19■□□□□ 0.5
TRAPPC9-205ENST00000518839 DDR1Q08345 913 aa18.19■□□□□ 0.5
TRAPPC9-205ENST00000518839 SLC15A2Q16348 729 aa18.19■□□□□ 0.5
TRAPPC9-205ENST00000518839 RPGRQ92834 1020 aaKnown RBP18.19■□□□□ 0.5
TRAPPC9-205ENST00000518839 CELF1Q92879 486 aaKnown RBP18.19■□□□□ 0.5
TRAPPC9-205ENST00000518839 GOLIM4O00461 696 aa18.18■□□□□ 0.5
TRAPPC9-205ENST00000518839 NMIQ13287 307 aaPredicted RBP18.18■□□□□ 0.5
TRAPPC9-205ENST00000518839 GRAPQ13588 217 aa18.18■□□□□ 0.5
TRAPPC9-205ENST00000518839 RABEP1Q15276 862 aa18.18■□□□□ 0.5
TRAPPC9-205ENST00000518839 TTF1Q15361 905 aaPredicted RBP18.18■□□□□ 0.5
TRAPPC9-205ENST00000518839 CRY2Q49AN0 593 aa18.18■□□□□ 0.5
TRAPPC9-205ENST00000518839 CCDC102BQ68D86 513 aa18.18■□□□□ 0.5
TRAPPC9-205ENST00000518839 CCDC125Q86Z20 511 aa18.18■□□□□ 0.5
TRAPPC9-205ENST00000518839 HELBQ8NG08 1087 aaPredicted RBP18.18■□□□□ 0.5
TRAPPC9-205ENST00000518839 GRAPLQ8TC17 118 aaPredicted RBP18.18■□□□□ 0.5
TRAPPC9-205ENST00000518839 RBM17Q96I25 401 aaKnown RBP18.18■□□□□ 0.5
TRAPPC9-205ENST00000518839 MINPP1Q9UNW1 487 aa18.18■□□□□ 0.5
TRAPPC9-205ENST00000518839 COL4A1P02462 1669 aa18.18■□□□□ 0.5
TRAPPC9-205ENST00000518839 TAF5LO75529 589 aa18.17■□□□□ 0.5
TRAPPC9-205ENST00000518839 ZFYP08048 801 aaPredicted RBP18.17■□□□□ 0.5
TRAPPC9-205ENST00000518839 CCDC24Q8N4L8 307 aa18.17■□□□□ 0.5
TRAPPC9-205ENST00000518839 PARP3Q9Y6F1 533 aa18.17■□□□□ 0.5
TRAPPC9-205ENST00000518839 ANKRD31Q8N7Z5 1873 aa18.16■□□□□ 0.5
TRAPPC9-205ENST00000518839 KLRG2A4D1S0 409 aaPredicted RBP18.16■□□□□ 0.5
TRAPPC9-205ENST00000518839 FKBP4Q02790 459 aaKnown RBP eCLIP18.16■□□□□ 0.5
TRAPPC9-205ENST00000518839 ZSCAN25Q6NSZ9 544 aa18.16■□□□□ 0.5
TRAPPC9-205ENST00000518839 SNX21Q969T3 373 aa18.16■□□□□ 0.5
TRAPPC9-205ENST00000518839 EDC3Q96F86 508 aaKnown RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms