RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 ZNF622Q969S3 477 aaKnown RBP eCLIP16.23■□□□□ 0.19
PABPC1-205ENST00000518196 KAZALD1Q96I82 304 aa16.23■□□□□ 0.19
PABPC1-205ENST00000518196 ZBTB40Q9NUA8 1239 aa16.23■□□□□ 0.19
PABPC1-205ENST00000518196 A0A0G2JLW4 131 aa16.22■□□□□ 0.19
PABPC1-205ENST00000518196 NEFLP07196 543 aa16.22■□□□□ 0.19
PABPC1-205ENST00000518196 CHRNA5P30532 468 aa16.22■□□□□ 0.19
PABPC1-205ENST00000518196 ALDH1B1P30837 517 aa16.22■□□□□ 0.19
PABPC1-205ENST00000518196 AAMPQ13685 434 aa16.22■□□□□ 0.19
PABPC1-205ENST00000518196 STYK1Q6J9G0 422 aa16.22■□□□□ 0.19
PABPC1-205ENST00000518196 CCDC85AQ96PX6 553 aaPredicted RBP16.22■□□□□ 0.19
PABPC1-205ENST00000518196 SYT17Q9BSW7 474 aa16.22■□□□□ 0.19
PABPC1-205ENST00000518196 HOXA10P31260 410 aaPredicted RBP16.21■□□□□ 0.19
PABPC1-205ENST00000518196 IRX6P78412 446 aaPredicted RBP16.21■□□□□ 0.19
PABPC1-205ENST00000518196 RABL6Q3YEC7 729 aaPredicted RBP16.21■□□□□ 0.19
PABPC1-205ENST00000518196 ANKRD44Q8N8A2 993 aa16.21■□□□□ 0.19
PABPC1-205ENST00000518196 CNKSR1Q969H4 720 aa16.21■□□□□ 0.19
PABPC1-205ENST00000518196 CRAMP1Q96RY5 1269 aa16.21■□□□□ 0.19
PABPC1-205ENST00000518196 ANKRD18BA2A2Z9 1011 aa16.2■□□□□ 0.18
PABPC1-205ENST00000518196 IFIT5Q13325 482 aaKnown RBP16.2■□□□□ 0.18
PABPC1-205ENST00000518196 CCDC57Q2TAC2 916 aa16.2■□□□□ 0.18
PABPC1-205ENST00000518196 EFCAB3Q8N7B9 438 aa16.2■□□□□ 0.18
PABPC1-205ENST00000518196 NLGN2Q8NFZ4 835 aa16.2■□□□□ 0.18
PABPC1-205ENST00000518196 CDC5LQ99459 802 aaKnown RBP16.2■□□□□ 0.18
PABPC1-205ENST00000518196 GREM2Q9H772 168 aa16.2■□□□□ 0.18
PABPC1-205ENST00000518196 C1orf115Q9H7X2 142 aa16.2■□□□□ 0.18
PABPC1-205ENST00000518196 PIM2Q9P1W9 311 aa16.2■□□□□ 0.18
PABPC1-205ENST00000518196 RTL9Q8NET4 1388 aa16.2■□□□□ 0.18
PABPC1-205ENST00000518196 COL11A2P13942 1736 aaPredicted RBP16.19■□□□□ 0.18
PABPC1-205ENST00000518196 DLEC1Q9Y238 1755 aa16.19■□□□□ 0.18
PABPC1-205ENST00000518196 ITGA6P23229 1130 aa16.19■□□□□ 0.18
PABPC1-205ENST00000518196 GRAPQ13588 217 aa16.19■□□□□ 0.18
PABPC1-205ENST00000518196 FAM161AQ3B820 660 aa16.19■□□□□ 0.18
PABPC1-205ENST00000518196 TTLL6Q8N841 843 aa16.19■□□□□ 0.18
PABPC1-205ENST00000518196 EXOC6Q8TAG9 804 aa16.19■□□□□ 0.18
PABPC1-205ENST00000518196 GRAPLQ8TC17 118 aaPredicted RBP16.19■□□□□ 0.18
PABPC1-205ENST00000518196 TMEM106CQ9BVX2 250 aa16.19■□□□□ 0.18
PABPC1-205ENST00000518196 SEC31BQ9NQW1 1179 aa16.19■□□□□ 0.18
PABPC1-205ENST00000518196 KIAA1551Q9HCM1 1747 aa16.19■□□□□ 0.18
PABPC1-205ENST00000518196 KCNA3P22001 575 aa16.18■□□□□ 0.18
PABPC1-205ENST00000518196 ATP8B2P98198 1209 aa16.18■□□□□ 0.18
PABPC1-205ENST00000518196 TAF7LQ5H9L4 462 aa16.18■□□□□ 0.18
PABPC1-205ENST00000518196 ANKRD18AQ8IVF6 992 aa16.18■□□□□ 0.18
PABPC1-205ENST00000518196 RPAP2Q8IXW5 612 aaPredicted RBP16.18■□□□□ 0.18
PABPC1-205ENST00000518196 RYDENQ9NUL5 291 aaKnown RBP16.18■□□□□ 0.18
PABPC1-205ENST00000518196 SRGAP3O43295 1099 aa16.17■□□□□ 0.18
PABPC1-205ENST00000518196 BBOX1O75936 387 aa16.17■□□□□ 0.18
PABPC1-205ENST00000518196 IGHMBP2P38935 993 aaKnown RBP16.17■□□□□ 0.18
PABPC1-205ENST00000518196 RPS8P62241 208 aaKnown RBP16.17■□□□□ 0.18
PABPC1-205ENST00000518196 MTX1Q13505 466 aa16.17■□□□□ 0.18
PABPC1-205ENST00000518196 DALRD3Q5D0E6 543 aaKnown RBP16.17■□□□□ 0.18
PABPC1-205ENST00000518196 TAF1P21675 1872 aa16.16■□□□□ 0.18
PABPC1-205ENST00000518196 CACNA1SQ13698 1873 aa16.16■□□□□ 0.18
PABPC1-205ENST00000518196 GALR2O43603 387 aaPredicted RBP16.16■□□□□ 0.18
PABPC1-205ENST00000518196 CEP85Q6P2H3 762 aa16.16■□□□□ 0.18
PABPC1-205ENST00000518196 TMC4Q7Z404 712 aa16.16■□□□□ 0.18
PABPC1-205ENST00000518196 CELF1Q92879 486 aaKnown RBP16.16■□□□□ 0.18
PABPC1-205ENST00000518196 MPHOSPH8Q99549 860 aa16.16■□□□□ 0.18
PABPC1-205ENST00000518196 MFRPQ9BY79 579 aa16.16■□□□□ 0.18
PABPC1-205ENST00000518196 TMX4Q9H1E5 349 aaPredicted RBP16.16■□□□□ 0.18
PABPC1-205ENST00000518196 PPEF1O14829 653 aaPredicted RBP16.15■□□□□ 0.18
PABPC1-205ENST00000518196 HMMRO75330 724 aa16.15■□□□□ 0.18
PABPC1-205ENST00000518196 PRPF40BQ6NWY9 871 aaKnown RBP16.15■□□□□ 0.18
PABPC1-205ENST00000518196 SLX4Q8IY92 1834 aa16.15■□□□□ 0.18
PABPC1-205ENST00000518196 BRCA1P38398 1863 aaKnown RBP16.14■□□□□ 0.17
PABPC1-205ENST00000518196 PNMA6EA0A0J9YXQ4 647 aa16.14■□□□□ 0.17
PABPC1-205ENST00000518196 SSH3Q8TE77 659 aa16.14■□□□□ 0.17
PABPC1-205ENST00000518196 BCS1LQ9Y276 419 aa16.14■□□□□ 0.17
PABPC1-205ENST00000518196 RFX5P48382 616 aaPredicted RBP16.13■□□□□ 0.17
PABPC1-205ENST00000518196 LDHAL6AQ6ZMR3 332 aa16.13■□□□□ 0.17
PABPC1-205ENST00000518196 ZNF594Q96JF6 807 aaPredicted RBP16.13■□□□□ 0.17
PABPC1-205ENST00000518196 CNNM1Q9NRU3 951 aa16.13■□□□□ 0.17
PABPC1-205ENST00000518196 BSDC1Q9NW68 430 aaPredicted RBP16.13■□□□□ 0.17
PABPC1-205ENST00000518196 WWC3Q9ULE0 1092 aa16.13■□□□□ 0.17
PABPC1-205ENST00000518196 SPEF2Q9C093 1822 aa16.12■□□□□ 0.17
PABPC1-205ENST00000518196 PTPN12Q05209 780 aaKnown RBP16.12■□□□□ 0.17
PABPC1-205ENST00000518196 SOGA3Q5TF21 947 aa16.12■□□□□ 0.17
PABPC1-205ENST00000518196 SP8Q8IXZ3 490 aa16.12■□□□□ 0.17
PABPC1-205ENST00000518196 COPRSQ9NQ92 184 aa16.12■□□□□ 0.17
PABPC1-205ENST00000518196 ATP6V0A2Q9Y487 856 aa16.12■□□□□ 0.17
PABPC1-205ENST00000518196 PCDHB15Q9Y5E8 787 aa16.12■□□□□ 0.17
PABPC1-205ENST00000518196 CC2D2BQ6DHV5 1058 aa16.11■□□□□ 0.17
PABPC1-205ENST00000518196 PELP1Q8IZL8 1130 aaKnown RBP16.11■□□□□ 0.17
PABPC1-205ENST00000518196 KLHDC4Q8TBB5 520 aa16.11■□□□□ 0.17
PABPC1-205ENST00000518196 ARFGEF1Q9Y6D6 1849 aa16.1■□□□□ 0.17
PABPC1-205ENST00000518196 EYA2O00167 538 aa16.1■□□□□ 0.17
PABPC1-205ENST00000518196 C21orf2O43822 256 aa16.1■□□□□ 0.17
PABPC1-205ENST00000518196 G3BP1Q13283 466 aaKnown RBP eCLIP16.1■□□□□ 0.172e-14■■■■□ 22
PABPC1-205ENST00000518196 GRIPAP1Q4V328 841 aa16.1■□□□□ 0.17
PABPC1-205ENST00000518196 POTEHQ6S545 545 aa16.1■□□□□ 0.17
PABPC1-205ENST00000518196 PA2G4Q9UQ80 394 aaKnown RBP16.1■□□□□ 0.17
PABPC1-205ENST00000518196 SURF6O75683 361 aaKnown RBP16.09■□□□□ 0.17
PABPC1-205ENST00000518196 CIAO1O76071 339 aa16.09■□□□□ 0.17
PABPC1-205ENST00000518196 GPR162Q16538 588 aa16.09■□□□□ 0.17
PABPC1-205ENST00000518196 CCDC93Q567U6 631 aa16.09■□□□□ 0.17
PABPC1-205ENST00000518196 HSP90AB4PQ58FF6 505 aa16.09■□□□□ 0.17
PABPC1-205ENST00000518196 SIRT2Q8IXJ6 389 aa16.09■□□□□ 0.17
PABPC1-205ENST00000518196 C7orf43Q8WVR3 580 aa16.09■□□□□ 0.17
PABPC1-205ENST00000518196 SIL1Q9H173 461 aa16.09■□□□□ 0.17
PABPC1-205ENST00000518196 MINPP1Q9UNW1 487 aa16.09■□□□□ 0.17
PABPC1-205ENST00000518196 OS9Q13438 667 aaPredicted RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms