RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 NBPF5PQ86XG9 351 aaPredicted RBP28.29■■■□□ 2.12
SLIT3-204ENST00000518140 SPRYD3Q8NCJ5 442 aa28.29■■■□□ 2.12
SLIT3-204ENST00000518140 SNX21Q969T3 373 aa28.29■■■□□ 2.12
SLIT3-204ENST00000518140 PDE8BO95263 885 aa28.28■■■□□ 2.12
SLIT3-204ENST00000518140 SLC10A5Q5PT55 438 aa28.28■■■□□ 2.12
SLIT3-204ENST00000518140 POTEAQ6S8J7 498 aa28.28■■■□□ 2.12
SLIT3-204ENST00000518140 COL4A1P02462 1669 aa28.28■■■□□ 2.12
SLIT3-204ENST00000518140 A0A0D9SFI3 127 aa28.28■■■□□ 2.12
SLIT3-204ENST00000518140 SNAP23O00161 211 aa28.28■■■□□ 2.12
SLIT3-204ENST00000518140 GOLIM4O00461 696 aa28.27■■■□□ 2.12
SLIT3-204ENST00000518140 GORABQ5T7V8 394 aa28.27■■■□□ 2.12
SLIT3-204ENST00000518140 MPHOSPH8Q99549 860 aa28.27■■■□□ 2.12
SLIT3-204ENST00000518140 RTL9Q8NET4 1388 aa28.27■■■□□ 2.12
SLIT3-204ENST00000518140 IFIT1P09914 478 aaKnown RBP28.27■■■□□ 2.12
SLIT3-204ENST00000518140 PTH1RQ03431 593 aa28.27■■■□□ 2.12
SLIT3-204ENST00000518140 SF3B3Q15393 1217 aaKnown RBP28.27■■■□□ 2.12
SLIT3-204ENST00000518140 RUFY2Q8WXA3 655 aa28.27■■■□□ 2.12
SLIT3-204ENST00000518140 TAF5LO75529 589 aa28.26■■■□□ 2.11
SLIT3-204ENST00000518140 SCARF1Q14162 830 aa28.26■■■□□ 2.11
SLIT3-204ENST00000518140 HSCBQ8IWL3 235 aa28.26■■■□□ 2.11
SLIT3-204ENST00000518140 C4AP0C0L4 1744 aa28.26■■■□□ 2.11
SLIT3-204ENST00000518140 NFIXQ14938 502 aa28.25■■■□□ 2.11
SLIT3-204ENST00000518140 RABEP1Q15276 862 aa28.25■■■□□ 2.11
SLIT3-204ENST00000518140 NYXQ9GZU5 481 aa28.25■■■□□ 2.11
SLIT3-204ENST00000518140 SNRKQ9NRH2 765 aa28.25■■■□□ 2.11
SLIT3-204ENST00000518140 PAG1Q9NWQ8 432 aa28.25■■■□□ 2.11
SLIT3-204ENST00000518140 APBA3O96018 575 aa28.25■■■□□ 2.11
SLIT3-204ENST00000518140 CCDC158Q5M9N0 1113 aa28.25■■■□□ 2.11
SLIT3-204ENST00000518140 ANTXR1Q9H6X2 564 aa28.25■■■□□ 2.11
SLIT3-204ENST00000518140 LRP5O75197 1615 aa28.24■■■□□ 2.11
SLIT3-204ENST00000518140 HIP1O00291 1037 aa28.24■■■□□ 2.11
SLIT3-204ENST00000518140 ADRA2BP18089 450 aa28.24■■■□□ 2.11
SLIT3-204ENST00000518140 TTC39AQ5SRH9 613 aa28.24■■■□□ 2.11
SLIT3-204ENST00000518140 TPTE2Q6XPS3 522 aa28.24■■■□□ 2.11
SLIT3-204ENST00000518140 MROH5Q6ZUA9 1318 aa28.24■■■□□ 2.11
SLIT3-204ENST00000518140 RAD50Q92878 1312 aa28.24■■■□□ 2.11
SLIT3-204ENST00000518140 LAMB2P55268 1798 aa28.24■■■□□ 2.11
SLIT3-204ENST00000518140 SLFNL1Q499Z3 407 aa28.23■■■□□ 2.11
SLIT3-204ENST00000518140 KIAA1211Q6ZU35 1233 aa28.23■■■□□ 2.11
SLIT3-204ENST00000518140 IGHMBP2P38935 993 aaKnown RBP28.23■■■□□ 2.11
SLIT3-204ENST00000518140 KBTBD3Q8NAB2 608 aa28.23■■■□□ 2.11
SLIT3-204ENST00000518140 SLKQ9H2G2 1235 aaPredicted RBP28.23■■■□□ 2.11
SLIT3-204ENST00000518140 FGFR2P21802 821 aa28.22■■■□□ 2.11
SLIT3-204ENST00000518140 HSPA4P34932 840 aa28.22■■■□□ 2.11
SLIT3-204ENST00000518140 UBR3Q6ZT12 1888 aa28.22■■■□□ 2.11
SLIT3-204ENST00000518140 GYS1P13807 737 aa28.22■■■□□ 2.11
SLIT3-204ENST00000518140 FKBP4Q02790 459 aaKnown RBP eCLIP28.22■■■□□ 2.11
SLIT3-204ENST00000518140 PI16Q6UXB8 463 aa28.22■■■□□ 2.11
SLIT3-204ENST00000518140 MCCP23508 829 aa28.21■■■□□ 2.11
SLIT3-204ENST00000518140 ZNF589Q86UQ0 364 aaPredicted RBP28.21■■■□□ 2.11
SLIT3-204ENST00000518140 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.21■■■□□ 2.11
SLIT3-204ENST00000518140 PLSCR1O15162 318 aa28.2■■■□□ 2.11
SLIT3-204ENST00000518140 EPB41L2O43491 1005 aaKnown RBP28.2■■■□□ 2.11
SLIT3-204ENST00000518140 PUM3Q15397 648 aaKnown RBP28.2■■■□□ 2.11
SLIT3-204ENST00000518140 COL24A1Q17RW2 1714 aa28.2■■■□□ 2.1
SLIT3-204ENST00000518140 SSFA2P28290 1259 aa28.2■■■□□ 2.1
SLIT3-204ENST00000518140 SEC62Q99442 399 aaKnown RBP28.2■■■□□ 2.1
SLIT3-204ENST00000518140 CELF1Q92879 486 aaKnown RBP28.19■■■□□ 2.1
SLIT3-204ENST00000518140 NLRP3Q96P20 1036 aa28.19■■■□□ 2.1
SLIT3-204ENST00000518140 CDC5LQ99459 802 aaKnown RBP28.19■■■□□ 2.1
SLIT3-204ENST00000518140 TAF1P21675 1872 aa28.19■■■□□ 2.1
SLIT3-204ENST00000518140 CHRNDQ07001 517 aa28.19■■■□□ 2.1
SLIT3-204ENST00000518140 RASEFQ8IZ41 740 aa28.19■■■□□ 2.1
SLIT3-204ENST00000518140 LPIN2Q92539 896 aa28.19■■■□□ 2.1
SLIT3-204ENST00000518140 WTIPA6NIX2 430 aaPredicted RBP28.18■■■□□ 2.1
SLIT3-204ENST00000518140 ZAP70P43403 619 aa28.18■■■□□ 2.1
SLIT3-204ENST00000518140 PHKA1P46020 1223 aa28.18■■■□□ 2.1
SLIT3-204ENST00000518140 ZNF827Q17R98 1081 aa28.18■■■□□ 2.1
SLIT3-204ENST00000518140 MCAMP43121 646 aa28.17■■■□□ 2.1
SLIT3-204ENST00000518140 ANAPC15P60006 121 aa28.17■■■□□ 2.1
SLIT3-204ENST00000518140 ANKRD18AQ8IVF6 992 aa28.17■■■□□ 2.1
SLIT3-204ENST00000518140 MED23Q9ULK4 1368 aa28.17■■■□□ 2.1
SLIT3-204ENST00000518140 CCDC171Q6TFL3 1326 aa28.17■■■□□ 2.1
SLIT3-204ENST00000518140 CCDC102BQ68D86 513 aa28.17■■■□□ 2.1
SLIT3-204ENST00000518140 SPEF2Q9C093 1822 aa28.16■■■□□ 2.1
SLIT3-204ENST00000518140 CCDC129Q6ZRS4 1044 aa28.16■■■□□ 2.1
SLIT3-204ENST00000518140 FBXO41Q8TF61 875 aa28.16■■■□□ 2.1
SLIT3-204ENST00000518140 IL17RAQ96F46 866 aa28.16■■■□□ 2.1
SLIT3-204ENST00000518140 CARMIL3Q8ND23 1372 aa28.16■■■□□ 2.1
SLIT3-204ENST00000518140 K7ELQ4 463 aaPredicted RBP28.15■■■□□ 2.1
SLIT3-204ENST00000518140 SNX14Q9Y5W7 946 aa28.15■■■□□ 2.1
SLIT3-204ENST00000518140 NPHP1O15259 732 aa28.15■■■□□ 2.1
SLIT3-204ENST00000518140 TM4SF1P30408 202 aa28.15■■■□□ 2.1
SLIT3-204ENST00000518140 NEK4P51957 841 aa28.14■■■□□ 2.1
SLIT3-204ENST00000518140 MAP4K1Q92918 833 aa28.14■■■□□ 2.1
SLIT3-204ENST00000518140 BSDC1Q9NW68 430 aaPredicted RBP28.14■■■□□ 2.1
SLIT3-204ENST00000518140 RFX7Q2KHR2 1363 aa28.14■■■□□ 2.1
SLIT3-204ENST00000518140 TFCP2L1Q9NZI6 479 aa28.14■■■□□ 2.09
SLIT3-204ENST00000518140 SLC5A1P13866 664 aa28.13■■■□□ 2.09
SLIT3-204ENST00000518140 PRPF40BQ6NWY9 871 aaKnown RBP28.13■■■□□ 2.09
SLIT3-204ENST00000518140 AKT1S1Q96B36 256 aa28.13■■■□□ 2.09
SLIT3-204ENST00000518140 MINPP1Q9UNW1 487 aa28.13■■■□□ 2.09
SLIT3-204ENST00000518140 CASZ1Q86V15 1759 aa28.12■■■□□ 2.09
SLIT3-204ENST00000518140 NECTIN1Q15223 517 aa28.12■■■□□ 2.09
SLIT3-204ENST00000518140 PRR5LQ6MZQ0 368 aa28.12■■■□□ 2.09
SLIT3-204ENST00000518140 CNBD1Q8NA66 436 aa28.12■■■□□ 2.09
SLIT3-204ENST00000518140 ZNF512BQ96KM6 892 aaPredicted RBP28.12■■■□□ 2.09
SLIT3-204ENST00000518140 UPF3BQ9BZI7 483 aaKnown RBP28.12■■■□□ 2.09
SLIT3-204ENST00000518140 RBM8AQ9Y5S9 174 aaKnown RBP28.12■■■□□ 2.09
SLIT3-204ENST00000518140 NFKBIBQ15653 356 aa28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms