RNA–Protein interactions for RNA: ENST00000518043.5

CPS1-210, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 2

Gene CPS1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-210ENST00000518043 CCDC27Q2M243 656 aa9.04□□□□□ -0.96
CPS1-210ENST00000518043 CYP4X1Q8N118 509 aa9.04□□□□□ -0.96
CPS1-210ENST00000518043 PHTF2Q8N3S3 785 aa9.04□□□□□ -0.96
CPS1-210ENST00000518043 SNIP1Q8TAD8 396 aaKnown RBP9.04□□□□□ -0.96
CPS1-210ENST00000518043 DISP2A7MBM2 1401 aa9.04□□□□□ -0.96
CPS1-210ENST00000518043 WDR17Q8IZU2 1322 aa9.04□□□□□ -0.96
CPS1-210ENST00000518043 ADH1CP00326 375 aa9.03□□□□□ -0.96
CPS1-210ENST00000518043 FSHRP23945 695 aa9.03□□□□□ -0.96
CPS1-210ENST00000518043 NFE2L2Q16236 605 aa9.03□□□□□ -0.96
CPS1-210ENST00000518043 RNF135Q8IUD6 432 aa9.03□□□□□ -0.96
CPS1-210ENST00000518043 TRMT2AQ8IZ69 625 aaKnown RBP9.03□□□□□ -0.96
CPS1-210ENST00000518043 ARID3AQ99856 593 aa9.03□□□□□ -0.96
CPS1-210ENST00000518043 SIPA1L3O60292 1781 aaPredicted RBP9.03□□□□□ -0.96
CPS1-210ENST00000518043 PLEKHG2Q9H7P9 1386 aa9.02□□□□□ -0.97
CPS1-210ENST00000518043 TTC24A2A3L6 582 aaPredicted RBP9.02□□□□□ -0.97
CPS1-210ENST00000518043 MTHFSDQ2M296 383 aaKnown RBP9.02□□□□□ -0.97
CPS1-210ENST00000518043 INTS6LQ5JSJ4 861 aaKnown RBP9.02□□□□□ -0.97
CPS1-210ENST00000518043 RNF20Q5VTR2 975 aa9.02□□□□□ -0.97
CPS1-210ENST00000518043 TBC1D9Q6ZT07 1266 aa9.02□□□□□ -0.97
CPS1-210ENST00000518043 SEPT12Q8IYM1 358 aa9.02□□□□□ -0.97
CPS1-210ENST00000518043 NGEFQ8N5V2 710 aa9.02□□□□□ -0.97
CPS1-210ENST00000518043 PPP1R12CQ9BZL4 782 aa9.02□□□□□ -0.97
CPS1-210ENST00000518043 TOR4AQ9NXH8 423 aa9.02□□□□□ -0.97
CPS1-210ENST00000518043 OVOS2A0A0G2JMS6 1433 aa9.02□□□□□ -0.97
CPS1-210ENST00000518043 MAPK8IP3Q9UPT6 1336 aa9.02□□□□□ -0.97
CPS1-210ENST00000518043 BCL9LQ86UU0 1499 aa9.02□□□□□ -0.97
CPS1-210ENST00000518043 SCN11AQ9UI33 1791 aa9.01□□□□□ -0.97
CPS1-210ENST00000518043 PALM3A6NDB9 673 aaPredicted RBP9.01□□□□□ -0.97
CPS1-210ENST00000518043 RAB15P59190 212 aa9.01□□□□□ -0.97
CPS1-210ENST00000518043 CRB1P82279 1406 aa9.01□□□□□ -0.97
CPS1-210ENST00000518043 NR5A1Q13285 461 aa9.01□□□□□ -0.97
CPS1-210ENST00000518043 LARP1Q6PKG0 1096 aaKnown RBP9.01□□□□□ -0.97
CPS1-210ENST00000518043 NFATC2IPQ8NCF5 419 aa9.01□□□□□ -0.97
CPS1-210ENST00000518043 TFIP11Q9UBB9 837 aaKnown RBP9.01□□□□□ -0.97
CPS1-210ENST00000518043 TOGARAM1Q9Y4F4 1720 aa9.01□□□□□ -0.97
CPS1-210ENST00000518043 WASF2Q9Y6W5 498 aa9.01□□□□□ -0.97
CPS1-210ENST00000518043 SPATA31A6Q5VVP1 1343 aa9.01□□□□□ -0.97
CPS1-210ENST00000518043 KDM3BQ7LBC6 1761 aa9□□□□□ -0.97
CPS1-210ENST00000518043 J3QL48 77 aa9□□□□□ -0.97
CPS1-210ENST00000518043 ATP9BO43861 1147 aa9□□□□□ -0.97
CPS1-210ENST00000518043 ADAMTS2O95450 1211 aa9□□□□□ -0.97
CPS1-210ENST00000518043 CENPBP07199 599 aaPredicted RBP9□□□□□ -0.97
CPS1-210ENST00000518043 SKIP12755 728 aa9□□□□□ -0.97
CPS1-210ENST00000518043 RIPK4P57078 832 aa9□□□□□ -0.97
CPS1-210ENST00000518043 SLFN5Q08AF3 891 aa9□□□□□ -0.97
CPS1-210ENST00000518043 PDE3BQ13370 1112 aa9□□□□□ -0.97
CPS1-210ENST00000518043 DUSP27Q5VZP5 1158 aa9□□□□□ -0.97
CPS1-210ENST00000518043 CCDC85AQ96PX6 553 aaPredicted RBP9□□□□□ -0.97
CPS1-210ENST00000518043 THUMPD2Q9BTF0 503 aaKnown RBP9□□□□□ -0.97
CPS1-210ENST00000518043 NLRP2Q9NX02 1062 aa9□□□□□ -0.97
CPS1-210ENST00000518043 BTG4Q9NY30 223 aa9□□□□□ -0.97
CPS1-210ENST00000518043 KDM6AO15550 1401 aaPredicted RBP8.99□□□□□ -0.97
CPS1-210ENST00000518043 TSGA10IPQ3SY00 556 aa8.99□□□□□ -0.97
CPS1-210ENST00000518043 CCDC125Q86Z20 511 aa8.99□□□□□ -0.97
CPS1-210ENST00000518043 PLPP7Q8NBV4 271 aa8.99□□□□□ -0.97
CPS1-210ENST00000518043 CARD10Q9BWT7 1032 aa8.99□□□□□ -0.97
CPS1-210ENST00000518043 PNNQ9H307 717 aaKnown RBP8.99□□□□□ -0.97
CPS1-210ENST00000518043 PDZRN3Q9UPQ7 1066 aa8.99□□□□□ -0.97
CPS1-210ENST00000518043 MRC1P22897 1456 aa8.99□□□□□ -0.97
CPS1-210ENST00000518043 THSD7AQ9UPZ6 1657 aa8.99□□□□□ -0.97
CPS1-210ENST00000518043 GLI3P10071 1580 aa8.99□□□□□ -0.97
CPS1-210ENST00000518043 CEMIPQ8WUJ3 1361 aa8.99□□□□□ -0.97
CPS1-210ENST00000518043 MAP3K5Q99683 1374 aa8.99□□□□□ -0.97
CPS1-210ENST00000518043 ERVH48-1M5A8F1 160 aa8.98□□□□□ -0.97
CPS1-210ENST00000518043 NR3C2P08235 984 aa8.98□□□□□ -0.97
CPS1-210ENST00000518043 ZNF853P0CG23 659 aa8.98□□□□□ -0.97
CPS1-210ENST00000518043 SMPD1P17405 629 aa8.98□□□□□ -0.97
CPS1-210ENST00000518043 WDR63Q8IWG1 891 aa8.98□□□□□ -0.97
CPS1-210ENST00000518043 CCDC116Q8IYX3 515 aa8.98□□□□□ -0.97
CPS1-210ENST00000518043 MAFBQ9Y5Q3 323 aaPredicted RBP8.98□□□□□ -0.97
CPS1-210ENST00000518043 IL16Q14005 1332 aa8.98□□□□□ -0.97
CPS1-210ENST00000518043 CSB-PGBD3P0DP91 1061 aa8.97□□□□□ -0.97
CPS1-210ENST00000518043 LMOD1P29536 600 aaPredicted RBP8.97□□□□□ -0.97
CPS1-210ENST00000518043 DHX9Q08211 1270 aaKnown RBP8.97□□□□□ -0.97
CPS1-210ENST00000518043 NNTQ13423 1086 aa8.97□□□□□ -0.97
CPS1-210ENST00000518043 DCTN1Q14203 1278 aa8.97□□□□□ -0.97
CPS1-210ENST00000518043 MAP7D1Q3KQU3 841 aa8.97□□□□□ -0.97
CPS1-210ENST00000518043 TRAF7Q6Q0C0 670 aa8.97□□□□□ -0.97
CPS1-210ENST00000518043 GAS2L2Q8NHY3 880 aa8.97□□□□□ -0.97
CPS1-210ENST00000518043 STRN4Q9NRL3 753 aa8.97□□□□□ -0.97
CPS1-210ENST00000518043 DOLKQ9UPQ8 538 aa8.97□□□□□ -0.97
CPS1-210ENST00000518043 PCDHB11Q9Y5F2 797 aa8.97□□□□□ -0.97
CPS1-210ENST00000518043 PAPPAQ13219 1627 aa8.96□□□□□ -0.98
CPS1-210ENST00000518043 USP17L5A8MUK1 530 aa8.96□□□□□ -0.98
CPS1-210ENST00000518043 CYP27B1O15528 508 aa8.96□□□□□ -0.98
CPS1-210ENST00000518043 TOM1L2Q6ZVM7 507 aa8.96□□□□□ -0.98
CPS1-210ENST00000518043 MCM10Q7L590 875 aa8.96□□□□□ -0.98
CPS1-210ENST00000518043 IL17REQ8NFR9 667 aa8.96□□□□□ -0.98
CPS1-210ENST00000518043 CDCA7Q9BWT1 371 aaPredicted RBP8.96□□□□□ -0.98
CPS1-210ENST00000518043 SPATA31A1Q5TZJ5 1347 aa8.96□□□□□ -0.98
CPS1-210ENST00000518043 SPATA31A5Q5VU36 1347 aa8.96□□□□□ -0.98
CPS1-210ENST00000518043 SPATA31A7Q8IWB4 1347 aa8.96□□□□□ -0.98
CPS1-210ENST00000518043 FANCIQ9NVI1 1328 aa8.96□□□□□ -0.98
CPS1-210ENST00000518043 ATRNO75882 1429 aa8.96□□□□□ -0.98
CPS1-210ENST00000518043 USP17L3A6NCW0 530 aa8.95□□□□□ -0.98
CPS1-210ENST00000518043 USP17L4A6NCW7 530 aa8.95□□□□□ -0.98
CPS1-210ENST00000518043 E9PSI1 815 aa8.95□□□□□ -0.98
CPS1-210ENST00000518043 RFX1P22670 979 aa8.95□□□□□ -0.98
CPS1-210ENST00000518043 PPP1R26Q5T8A7 1209 aaPredicted RBP8.95□□□□□ -0.98
CPS1-210ENST00000518043 ZNF530Q6P9A1 599 aaPredicted RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms