RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 LTBP1Q14766 1721 aa13.02□□□□□ -0.32
PABPC1-203ENST00000517921 BRCA1P38398 1863 aaKnown RBP13.02□□□□□ -0.32
PABPC1-203ENST00000517921 MX1P20591 662 aa13.02□□□□□ -0.33
PABPC1-203ENST00000517921 TFCP2Q12800 502 aa13.02□□□□□ -0.33
PABPC1-203ENST00000517921 CLASRPQ8N2M8 674 aaKnown RBP13.02□□□□□ -0.33
PABPC1-203ENST00000517921 RIPOR2Q9Y4F9 1068 aa13.02□□□□□ -0.33
PABPC1-203ENST00000517921 PARP3Q9Y6F1 533 aa13.02□□□□□ -0.33
PABPC1-203ENST00000517921 PDE1AP54750 535 aa13.01□□□□□ -0.33
PABPC1-203ENST00000517921 TNNI3KQ59H18 835 aa13.01□□□□□ -0.33
PABPC1-203ENST00000517921 LDHAL6AQ6ZMR3 332 aa13.01□□□□□ -0.33
PABPC1-203ENST00000517921 AACSQ86V21 672 aa13.01□□□□□ -0.33
PABPC1-203ENST00000517921 EAF2Q96CJ1 260 aaPredicted RBP13.01□□□□□ -0.33
PABPC1-203ENST00000517921 CDC5LQ99459 802 aaKnown RBP13.01□□□□□ -0.33
PABPC1-203ENST00000517921 OSBPL3Q9H4L5 887 aa13.01□□□□□ -0.33
PABPC1-203ENST00000517921 FPGT-TNNI3KV9GXZ4 949 aa13.01□□□□□ -0.33
PABPC1-203ENST00000517921 AOX1Q06278 1338 aa13.01□□□□□ -0.33
PABPC1-203ENST00000517921 SLX4Q8IY92 1834 aa13□□□□□ -0.33
PABPC1-203ENST00000517921 IGHMBP2P38935 993 aaKnown RBP13□□□□□ -0.33
PABPC1-203ENST00000517921 GPR162Q16538 588 aa13□□□□□ -0.33
PABPC1-203ENST00000517921 CRY2Q49AN0 593 aa13□□□□□ -0.33
PABPC1-203ENST00000517921 TTC22Q5TAA0 569 aa13□□□□□ -0.33
PABPC1-203ENST00000517921 VGLL2Q8N8G2 317 aa13□□□□□ -0.33
PABPC1-203ENST00000517921 MPHOSPH8Q99549 860 aa13□□□□□ -0.33
PABPC1-203ENST00000517921 GPR108Q9NPR9 543 aa13□□□□□ -0.33
PABPC1-203ENST00000517921 CNNM1Q9NRU3 951 aa13□□□□□ -0.33
PABPC1-203ENST00000517921 STAP2Q9UGK3 403 aa13□□□□□ -0.33
PABPC1-203ENST00000517921 C10orf71Q711Q0 1435 aa12.99□□□□□ -0.33
PABPC1-203ENST00000517921 MROH5Q6ZUA9 1318 aa12.99□□□□□ -0.33
PABPC1-203ENST00000517921 KLRG2A4D1S0 409 aaPredicted RBP12.99□□□□□ -0.33
PABPC1-203ENST00000517921 GSPT1P15170 499 aaKnown RBP12.99□□□□□ -0.33
PABPC1-203ENST00000517921 BMP2KLQ5H9B9 411 aa12.99□□□□□ -0.33
PABPC1-203ENST00000517921 METTL24Q5JXM2 366 aa12.99□□□□□ -0.33
PABPC1-203ENST00000517921 TSHZ3Q63HK5 1081 aa12.99□□□□□ -0.33
PABPC1-203ENST00000517921 ANKRD18AQ8IVF6 992 aa12.99□□□□□ -0.33
PABPC1-203ENST00000517921 CELF1Q92879 486 aaKnown RBP12.99□□□□□ -0.33
PABPC1-203ENST00000517921 CCDC8Q9H0W5 538 aaPredicted RBP12.99□□□□□ -0.33
PABPC1-203ENST00000517921 TLR7Q9NYK1 1049 aaKnown RBP12.99□□□□□ -0.33
PABPC1-203ENST00000517921 CEP126Q9P2H0 1117 aa12.99□□□□□ -0.33
PABPC1-203ENST00000517921 DOCK2Q92608 1830 aa12.99□□□□□ -0.33
PABPC1-203ENST00000517921 TTC41PQ6P2S7 1318 aa12.98□□□□□ -0.33
PABPC1-203ENST00000517921 IFIT2P09913 472 aaKnown RBP12.98□□□□□ -0.33
PABPC1-203ENST00000517921 DDX46Q7L014 1031 aaKnown RBP12.98□□□□□ -0.33
PABPC1-203ENST00000517921 BRIP1Q9BX63 1249 aa12.98□□□□□ -0.33
PABPC1-203ENST00000517921 DBNLQ9UJU6 430 aaKnown RBP12.98□□□□□ -0.33
PABPC1-203ENST00000517921 A0A1B0GUL7 405 aa12.97□□□□□ -0.33
PABPC1-203ENST00000517921 GRAPQ13588 217 aa12.97□□□□□ -0.33
PABPC1-203ENST00000517921 GRAPLQ8TC17 118 aaPredicted RBP12.97□□□□□ -0.33
PABPC1-203ENST00000517921 PI4K2BQ8TCG2 481 aa12.97□□□□□ -0.33
PABPC1-203ENST00000517921 BSDC1Q9NW68 430 aaPredicted RBP12.97□□□□□ -0.33
PABPC1-203ENST00000517921 PDE8BO95263 885 aa12.96□□□□□ -0.33
PABPC1-203ENST00000517921 RPS8P62241 208 aaKnown RBP12.96□□□□□ -0.33
PABPC1-203ENST00000517921 CHRNDQ07001 517 aa12.96□□□□□ -0.33
PABPC1-203ENST00000517921 C8orf34Q49A92 452 aa12.96□□□□□ -0.33
PABPC1-203ENST00000517921 RPGRQ92834 1020 aaKnown RBP12.96□□□□□ -0.33
PABPC1-203ENST00000517921 GPATCH3Q96I76 525 aa12.96□□□□□ -0.33
PABPC1-203ENST00000517921 DBNDD2Q9BQY9 259 aa12.96□□□□□ -0.33
PABPC1-203ENST00000517921 ECHDC1Q9NTX5 307 aa12.96□□□□□ -0.33
PABPC1-203ENST00000517921 AKAP2Q9Y2D5 859 aa12.96□□□□□ -0.33
PABPC1-203ENST00000517921 FGFR2P21802 821 aa12.95□□□□□ -0.34
PABPC1-203ENST00000517921 HOXA10P31260 410 aaPredicted RBP12.95□□□□□ -0.34
PABPC1-203ENST00000517921 TIMM10P62072 90 aa12.95□□□□□ -0.34
PABPC1-203ENST00000517921 ATP2B3Q16720 1220 aa12.95□□□□□ -0.34
PABPC1-203ENST00000517921 NLGN2Q8NFZ4 835 aa12.95□□□□□ -0.34
PABPC1-203ENST00000517921 RBM17Q96I25 401 aaKnown RBP12.95□□□□□ -0.34
PABPC1-203ENST00000517921 CHD4Q14839 1912 aa12.95□□□□□ -0.34
PABPC1-203ENST00000517921 CCDC88AQ3V6T2 1871 aa12.94□□□□□ -0.34
PABPC1-203ENST00000517921 ERC2O15083 957 aa12.94□□□□□ -0.34
PABPC1-203ENST00000517921 GLRX3O76003 335 aaKnown RBP12.94□□□□□ -0.34
PABPC1-203ENST00000517921 SRGNP10124 158 aa12.94□□□□□ -0.34
PABPC1-203ENST00000517921 SDSP20132 328 aa12.94□□□□□ -0.34
PABPC1-203ENST00000517921 ADORA1P30542 326 aa12.94□□□□□ -0.34
PABPC1-203ENST00000517921 PDE6BP35913 854 aa12.94□□□□□ -0.34
PABPC1-203ENST00000517921 PUM3Q15397 648 aaKnown RBP12.94□□□□□ -0.34
PABPC1-203ENST00000517921 HELBQ8NG08 1087 aaPredicted RBP12.94□□□□□ -0.34
PABPC1-203ENST00000517921 NEUROD6Q96NK8 337 aa12.94□□□□□ -0.34
PABPC1-203ENST00000517921 CRAMP1Q96RY5 1269 aa12.94□□□□□ -0.34
PABPC1-203ENST00000517921 BACH2Q9BYV9 841 aa12.94□□□□□ -0.34
PABPC1-203ENST00000517921 MINPP1Q9UNW1 487 aa12.94□□□□□ -0.34
PABPC1-203ENST00000517921 TAF5LO75529 589 aa12.93□□□□□ -0.34
PABPC1-203ENST00000517921 NPR1P16066 1061 aa12.93□□□□□ -0.34
PABPC1-203ENST00000517921 SLC51AQ86UW1 340 aa12.93□□□□□ -0.34
PABPC1-203ENST00000517921 XAGE2Q96GT9 111 aa12.93□□□□□ -0.34
PABPC1-203ENST00000517921 CD2APQ9Y5K6 639 aa12.93□□□□□ -0.34
PABPC1-203ENST00000517921 DUOX1Q9NRD9 1551 aa12.93□□□□□ -0.34
PABPC1-203ENST00000517921 SLC5A1P13866 664 aa12.92□□□□□ -0.34
PABPC1-203ENST00000517921 ATP5JP18859 108 aa12.92□□□□□ -0.34
PABPC1-203ENST00000517921 LPIN2Q92539 896 aa12.92□□□□□ -0.34
PABPC1-203ENST00000517921 MASTLQ96GX5 879 aa12.92□□□□□ -0.34
PABPC1-203ENST00000517921 ARFGEF1Q9Y6D6 1849 aa12.92□□□□□ -0.34
PABPC1-203ENST00000517921 SNAP23O00161 211 aa12.91□□□□□ -0.34
PABPC1-203ENST00000517921 GRIN3BO60391 1043 aa12.91□□□□□ -0.34
PABPC1-203ENST00000517921 UBE4AQ14139 1066 aa12.91□□□□□ -0.34
PABPC1-203ENST00000517921 C2CD5Q86YS7 1000 aa12.91□□□□□ -0.34
PABPC1-203ENST00000517921 ANKRD2Q9GZV1 360 aa12.91□□□□□ -0.34
PABPC1-203ENST00000517921 MAST2Q6P0Q8 1798 aa12.91□□□□□ -0.34
PABPC1-203ENST00000517921 ZNF646O15015 1829 aaPredicted RBP12.9□□□□□ -0.34
PABPC1-203ENST00000517921 PSME4Q14997 1843 aa12.9□□□□□ -0.34
PABPC1-203ENST00000517921 TRIM6-TRIM34B2RNG4 842 aa12.9□□□□□ -0.34
PABPC1-203ENST00000517921 PPEF1O14829 653 aaPredicted RBP12.9□□□□□ -0.34
PABPC1-203ENST00000517921 BBOX1O75936 387 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms