RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 CNNM1Q9NRU3 951 aa31.87■■■□□ 2.69
COL13A1-210ENST00000517713 SPEF2Q9C093 1822 aa31.86■■■□□ 2.69
COL13A1-210ENST00000517713 TRAK2O60296 914 aa31.85■■■□□ 2.69
COL13A1-210ENST00000517713 CHGBP05060 677 aa31.85■■■□□ 2.69
COL13A1-210ENST00000517713 PKP1Q13835 747 aa31.85■■■□□ 2.69
COL13A1-210ENST00000517713 TTC39AQ5SRH9 613 aa31.85■■■□□ 2.69
COL13A1-210ENST00000517713 CYP46A1Q9Y6A2 500 aa31.85■■■□□ 2.69
COL13A1-210ENST00000517713 CPA1P15085 419 aa31.85■■■□□ 2.69
COL13A1-210ENST00000517713 VPS53Q5VIR6 699 aa31.84■■■□□ 2.69
COL13A1-210ENST00000517713 LINC00116Q8NCU8 138 aa31.84■■■□□ 2.69
COL13A1-210ENST00000517713 SEC62Q99442 399 aaKnown RBP31.84■■■□□ 2.69
COL13A1-210ENST00000517713 PDRG1Q9NUG6 133 aa31.84■■■□□ 2.69
COL13A1-210ENST00000517713 LIMCH1Q9UPQ0 1083 aa31.84■■■□□ 2.69
COL13A1-210ENST00000517713 FAM177BA6PVY3 158 aa31.83■■■□□ 2.69
COL13A1-210ENST00000517713 ATP2B3Q16720 1220 aa31.83■■■□□ 2.69
COL13A1-210ENST00000517713 RUFY3Q7L099 469 aa31.83■■■□□ 2.69
COL13A1-210ENST00000517713 PTMSP20962 102 aa31.83■■■□□ 2.69
COL13A1-210ENST00000517713 USPL1Q5W0Q7 1092 aa31.83■■■□□ 2.69
COL13A1-210ENST00000517713 HMG20BQ9P0W2 317 aa31.83■■■□□ 2.69
COL13A1-210ENST00000517713 THSD7AQ9UPZ6 1657 aa31.82■■■□□ 2.68
COL13A1-210ENST00000517713 BAG4O95429 457 aaKnown RBP31.82■■■□□ 2.68
COL13A1-210ENST00000517713 HCLS1P14317 486 aaPredicted RBP31.82■■■□□ 2.68
COL13A1-210ENST00000517713 PSMA5P28066 241 aa31.82■■■□□ 2.68
COL13A1-210ENST00000517713 CCDC129Q6ZRS4 1044 aa31.82■■■□□ 2.68
COL13A1-210ENST00000517713 HELLSQ9NRZ9 838 aa31.82■■■□□ 2.68
COL13A1-210ENST00000517713 NIP7Q9Y221 180 aaKnown RBP eCLIP31.82■■■□□ 2.68
COL13A1-210ENST00000517713 ZNF652Q9Y2D9 606 aa31.82■■■□□ 2.68
COL13A1-210ENST00000517713 RPAP1Q9BWH6 1393 aaPredicted RBP31.81■■■□□ 2.68
COL13A1-210ENST00000517713 ZDHHC9Q9Y397 364 aa31.8■■■□□ 2.68
COL13A1-210ENST00000517713 FKBP4Q02790 459 aaKnown RBP eCLIP31.8■■■□□ 2.68
COL13A1-210ENST00000517713 TSGA10IPQ3SY00 556 aa31.8■■■□□ 2.68
COL13A1-210ENST00000517713 PTF1AQ7RTS3 328 aa31.8■■■□□ 2.68
COL13A1-210ENST00000517713 VGLL2Q8N8G2 317 aa31.8■■■□□ 2.68
COL13A1-210ENST00000517713 CERKQ8TCT0 537 aa31.8■■■□□ 2.68
COL13A1-210ENST00000517713 ZMYM1Q5SVZ6 1142 aa31.79■■■□□ 2.68
COL13A1-210ENST00000517713 BCORQ6W2J9 1755 aa31.79■■■□□ 2.68
COL13A1-210ENST00000517713 U3KPZ7 1027 aaPredicted RBP31.79■■■□□ 2.68
COL13A1-210ENST00000517713 ABCC12Q96J65 1359 aa31.78■■■□□ 2.68
COL13A1-210ENST00000517713 GOLGA6L22H0YM25 854 aa31.78■■■□□ 2.68
COL13A1-210ENST00000517713 NTSR2O95665 410 aa31.78■■■□□ 2.68
COL13A1-210ENST00000517713 MEX3CQ5U5Q3 659 aaKnown RBP31.78■■■□□ 2.68
COL13A1-210ENST00000517713 RNF113AO15541 343 aaKnown RBP31.78■■■□□ 2.68
COL13A1-210ENST00000517713 HSP90B1P14625 803 aaKnown RBP31.78■■■□□ 2.68
COL13A1-210ENST00000517713 CLEC4GQ6UXB4 293 aa31.78■■■□□ 2.68
COL13A1-210ENST00000517713 CNTNAP4Q9C0A0 1308 aa31.77■■■□□ 2.68
COL13A1-210ENST00000517713 PDE8BO95263 885 aa31.77■■■□□ 2.68
COL13A1-210ENST00000517713 KCNQ4P56696 695 aa31.77■■■□□ 2.68
COL13A1-210ENST00000517713 LARP6Q9BRS8 491 aaKnown RBP31.77■■■□□ 2.68
COL13A1-210ENST00000517713 LRP5O75197 1615 aa31.77■■■□□ 2.68
COL13A1-210ENST00000517713 DDX60Q8IY21 1712 aaKnown RBP31.76■■■□□ 2.68
COL13A1-210ENST00000517713 LRRFIP1Q32MZ4 808 aaKnown RBP31.76■■■□□ 2.67
COL13A1-210ENST00000517713 SLFNL1Q499Z3 407 aa31.76■■■□□ 2.67
COL13A1-210ENST00000517713 MROH5Q6ZUA9 1318 aa31.75■■■□□ 2.67
COL13A1-210ENST00000517713 BTAF1O14981 1849 aa31.75■■■□□ 2.67
COL13A1-210ENST00000517713 SCARF1Q14162 830 aa31.75■■■□□ 2.67
COL13A1-210ENST00000517713 BLOC1S2Q6QNY1 142 aa31.75■■■□□ 2.67
COL13A1-210ENST00000517713 ZSCAN31Q96LW9 406 aaPredicted RBP31.75■■■□□ 2.67
COL13A1-210ENST00000517713 TAF6LQ9Y6J9 622 aa31.75■■■□□ 2.67
COL13A1-210ENST00000517713 NHSQ6T4R5 1651 aa31.74■■■□□ 2.67
COL13A1-210ENST00000517713 KRT32Q14532 448 aa31.74■■■□□ 2.67
COL13A1-210ENST00000517713 SKOR2Q2VWA4 1001 aaPredicted RBP31.74■■■□□ 2.67
COL13A1-210ENST00000517713 CCDC152Q4G0S7 254 aa31.74■■■□□ 2.67
COL13A1-210ENST00000517713 GJD4Q96KN9 370 aaPredicted RBP31.74■■■□□ 2.67
COL13A1-210ENST00000517713 LAMB2P55268 1798 aa31.73■■■□□ 2.67
COL13A1-210ENST00000517713 ZAP70P43403 619 aa31.73■■■□□ 2.67
COL13A1-210ENST00000517713 BRD1O95696 1058 aa31.72■■■□□ 2.67
COL13A1-210ENST00000517713 ZNF512BQ96KM6 892 aaPredicted RBP31.72■■■□□ 2.67
COL13A1-210ENST00000517713 SH2B1Q9NRF2 756 aaPredicted RBP31.72■■■□□ 2.67
COL13A1-210ENST00000517713 ZSCAN21Q9Y5A6 473 aaPredicted RBP31.72■■■□□ 2.67
COL13A1-210ENST00000517713 RPS6KB1P23443 525 aa31.71■■■□□ 2.67
COL13A1-210ENST00000517713 FAM182BQ5T319 152 aa31.71■■■□□ 2.67
COL13A1-210ENST00000517713 RC3H1Q5TC82 1133 aaKnown RBP31.71■■■□□ 2.67
COL13A1-210ENST00000517713 DSCC1Q9BVC3 393 aa31.71■■■□□ 2.67
COL13A1-210ENST00000517713 RTL9Q8NET4 1388 aa31.71■■■□□ 2.67
COL13A1-210ENST00000517713 ZFYP08048 801 aaPredicted RBP31.71■■■□□ 2.67
COL13A1-210ENST00000517713 PUM3Q15397 648 aaKnown RBP31.71■■■□□ 2.67
COL13A1-210ENST00000517713 MPHOSPH8Q99549 860 aa31.71■■■□□ 2.67
COL13A1-210ENST00000517713 ALDH8A1Q9H2A2 487 aaPredicted RBP31.71■■■□□ 2.67
COL13A1-210ENST00000517713 SEC31BQ9NQW1 1179 aa31.71■■■□□ 2.67
COL13A1-210ENST00000517713 MAST3O60307 1309 aa31.71■■■□□ 2.67
COL13A1-210ENST00000517713 LARGE1O95461 756 aa31.7■■■□□ 2.67
COL13A1-210ENST00000517713 HSPA1LP34931 641 aa31.7■■■□□ 2.67
COL13A1-210ENST00000517713 MCTP1Q6DN14 999 aa31.7■■■□□ 2.67
COL13A1-210ENST00000517713 GZF1Q9H116 711 aaPredicted RBP31.7■■■□□ 2.67
COL13A1-210ENST00000517713 AFF2P51816 1311 aa31.69■■■□□ 2.66
COL13A1-210ENST00000517713 MCAMP43121 646 aa31.69■■■□□ 2.66
COL13A1-210ENST00000517713 LPIN2Q92539 896 aa31.69■■■□□ 2.66
COL13A1-210ENST00000517713 RGL2O15211 777 aa31.68■■■□□ 2.66
COL13A1-210ENST00000517713 CYP21A2P08686 494 aa31.68■■■□□ 2.66
COL13A1-210ENST00000517713 FGFR2P21802 821 aa31.68■■■□□ 2.66
COL13A1-210ENST00000517713 COL9A3Q14050 684 aaPredicted RBP31.68■■■□□ 2.66
COL13A1-210ENST00000517713 ANKRD1Q15327 319 aa31.68■■■□□ 2.66
COL13A1-210ENST00000517713 HELBQ8NG08 1087 aaPredicted RBP31.68■■■□□ 2.66
COL13A1-210ENST00000517713 PI16Q6UXB8 463 aa31.68■■■□□ 2.66
COL13A1-210ENST00000517713 M0R2C6 588 aa31.67■■■□□ 2.66
COL13A1-210ENST00000517713 OSBP2Q969R2 916 aa31.67■■■□□ 2.66
COL13A1-210ENST00000517713 NEK1Q96PY6 1258 aa31.67■■■□□ 2.66
COL13A1-210ENST00000517713 RPS6KA4O75676 772 aa31.66■■■□□ 2.66
COL13A1-210ENST00000517713 HSPD1P10809 573 aaKnown RBP31.66■■■□□ 2.66
COL13A1-210ENST00000517713 IGHMBP2P38935 993 aaKnown RBP31.66■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms