RNA–Protein interactions for RNA: ENST00000517693.5

SPIDR-203, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 1,848 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-203ENST00000517693 RFC4P35249 363 aa14.21□□□□□ -0.13
SPIDR-203ENST00000517693 PUM3Q15397 648 aaKnown RBP14.21□□□□□ -0.13
SPIDR-203ENST00000517693 TRAPPC3LQ5T215 181 aa14.21□□□□□ -0.13
SPIDR-203ENST00000517693 RNF20Q5VTR2 975 aa14.21□□□□□ -0.13
SPIDR-203ENST00000517693 SYNE4Q8N205 404 aa14.21□□□□□ -0.13
SPIDR-203ENST00000517693 ZNF512BQ96KM6 892 aaPredicted RBP14.21□□□□□ -0.13
SPIDR-203ENST00000517693 LSG1Q9H089 658 aaKnown RBP14.21□□□□□ -0.13
SPIDR-203ENST00000517693 CCDC171Q6TFL3 1326 aa14.21□□□□□ -0.14
SPIDR-203ENST00000517693 PDE8BO95263 885 aa14.2□□□□□ -0.14
SPIDR-203ENST00000517693 HCLS1P14317 486 aaPredicted RBP14.2□□□□□ -0.14
SPIDR-203ENST00000517693 ZKSCAN1P17029 563 aaPredicted RBP14.2□□□□□ -0.14
SPIDR-203ENST00000517693 TIMM10P62072 90 aa14.2□□□□□ -0.14
SPIDR-203ENST00000517693 FAM182BQ5T319 152 aa14.2□□□□□ -0.14
SPIDR-203ENST00000517693 LPIN2Q92539 896 aa14.2□□□□□ -0.14
SPIDR-203ENST00000517693 XAGE2Q96GT9 111 aa14.2□□□□□ -0.14
SPIDR-203ENST00000517693 CHMP5Q9NZZ3 219 aa14.2□□□□□ -0.14
SPIDR-203ENST00000517693 FAM177BA6PVY3 158 aa14.2□□□□□ -0.14
SPIDR-203ENST00000517693 ZFYP08048 801 aaPredicted RBP14.2□□□□□ -0.14
SPIDR-203ENST00000517693 UQCRFS1P1P0C7P4 283 aa14.2□□□□□ -0.14
SPIDR-203ENST00000517693 SLC5A1P13866 664 aa14.2□□□□□ -0.14
SPIDR-203ENST00000517693 NMIQ13287 307 aaPredicted RBP14.2□□□□□ -0.14
SPIDR-203ENST00000517693 TPTE2Q6XPS3 522 aa14.2□□□□□ -0.14
SPIDR-203ENST00000517693 MED23Q9ULK4 1368 aa14.19□□□□□ -0.14
SPIDR-203ENST00000517693 ARAP2Q8WZ64 1704 aa14.19□□□□□ -0.14
SPIDR-203ENST00000517693 KCNJ4P48050 445 aa14.19□□□□□ -0.14
SPIDR-203ENST00000517693 TTF1Q15361 905 aaPredicted RBP14.19□□□□□ -0.14
SPIDR-203ENST00000517693 SF3B3Q15393 1217 aaKnown RBP14.19□□□□□ -0.14
SPIDR-203ENST00000517693 SLC10A5Q5PT55 438 aa14.19□□□□□ -0.14
SPIDR-203ENST00000517693 USPL1Q5W0Q7 1092 aa14.19□□□□□ -0.14
SPIDR-203ENST00000517693 PTF1AQ7RTS3 328 aa14.19□□□□□ -0.14
SPIDR-203ENST00000517693 SLKQ9H2G2 1235 aaPredicted RBP14.19□□□□□ -0.14
SPIDR-203ENST00000517693 HMG20BQ9P0W2 317 aa14.19□□□□□ -0.14
SPIDR-203ENST00000517693 BRWD3Q6RI45 1802 aa14.19□□□□□ -0.14
SPIDR-203ENST00000517693 CARMIL3Q8ND23 1372 aa14.19□□□□□ -0.14
SPIDR-203ENST00000517693 SSFA2P28290 1259 aa14.18□□□□□ -0.14
SPIDR-203ENST00000517693 ZSCAN25Q6NSZ9 544 aa14.18□□□□□ -0.14
SPIDR-203ENST00000517693 NBPF5PQ86XG9 351 aaPredicted RBP14.18□□□□□ -0.14
SPIDR-203ENST00000517693 VGLL2Q8N8G2 317 aa14.18□□□□□ -0.14
SPIDR-203ENST00000517693 HELLSQ9NRZ9 838 aa14.18□□□□□ -0.14
SPIDR-203ENST00000517693 C4AP0C0L4 1744 aa14.18□□□□□ -0.14
SPIDR-203ENST00000517693 MCMDC2Q4G0Z9 681 aa14.18□□□□□ -0.14
SPIDR-203ENST00000517693 TBC1D9BQ66K14 1250 aa14.18□□□□□ -0.14
SPIDR-203ENST00000517693 ANKRD18AQ8IVF6 992 aa14.18□□□□□ -0.14
SPIDR-203ENST00000517693 ARHGEF1Q92888 912 aaKnown RBP14.18□□□□□ -0.14
SPIDR-203ENST00000517693 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.18□□□□□ -0.143e-6■■■■■ 34.1
SPIDR-203ENST00000517693 ANTXR1Q9H6X2 564 aa14.18□□□□□ -0.14
SPIDR-203ENST00000517693 GOLIM4O00461 696 aa14.17□□□□□ -0.14
SPIDR-203ENST00000517693 NPHP1O15259 732 aa14.17□□□□□ -0.14
SPIDR-203ENST00000517693 PSMA5P28066 241 aa14.17□□□□□ -0.14
SPIDR-203ENST00000517693 NEK4P51957 841 aa14.17□□□□□ -0.14
SPIDR-203ENST00000517693 KCNQ4P56696 695 aa14.17□□□□□ -0.14
SPIDR-203ENST00000517693 NLRP3Q96P20 1036 aa14.17□□□□□ -0.14
SPIDR-203ENST00000517693 A0A0D9SFI3 127 aa14.16□□□□□ -0.14
SPIDR-203ENST00000517693 ERFEQ4G0M1 354 aa14.16□□□□□ -0.14
SPIDR-203ENST00000517693 DDX46Q7L014 1031 aaKnown RBP14.16□□□□□ -0.14
SPIDR-203ENST00000517693 MAP4K1Q92918 833 aa14.16□□□□□ -0.14
SPIDR-203ENST00000517693 FAM227BQ96M60 508 aa14.16□□□□□ -0.14
SPIDR-203ENST00000517693 TM6SF1Q9BZW5 370 aa14.16□□□□□ -0.14
SPIDR-203ENST00000517693 BCL2L12Q9HB09 334 aa14.16□□□□□ -0.14
SPIDR-203ENST00000517693 CWC22Q9HCG8 908 aaKnown RBP14.16□□□□□ -0.14
SPIDR-203ENST00000517693 KRT32Q14532 448 aa14.15□□□□□ -0.14
SPIDR-203ENST00000517693 KCNB2Q92953 911 aa14.15□□□□□ -0.14
SPIDR-203ENST00000517693 IL25Q9H293 177 aa14.15□□□□□ -0.14
SPIDR-203ENST00000517693 U3KPZ7 1027 aaPredicted RBP14.15□□□□□ -0.14
SPIDR-203ENST00000517693 TRIM37O94972 964 aa14.15□□□□□ -0.14
SPIDR-203ENST00000517693 FGFR2P21802 821 aa14.15□□□□□ -0.14
SPIDR-203ENST00000517693 ARID4AP29374 1257 aaPredicted RBP14.15□□□□□ -0.14
SPIDR-203ENST00000517693 BICDL1Q6ZP65 573 aa14.15□□□□□ -0.14
SPIDR-203ENST00000517693 BSDC1Q9NW68 430 aaPredicted RBP14.15□□□□□ -0.14
SPIDR-203ENST00000517693 RBM8AQ9Y5S9 174 aaKnown RBP14.15□□□□□ -0.14
SPIDR-203ENST00000517693 SNX14Q9Y5W7 946 aa14.15□□□□□ -0.14
SPIDR-203ENST00000517693 UBR3Q6ZT12 1888 aa14.14□□□□□ -0.15
SPIDR-203ENST00000517693 RNF113AO15541 343 aaKnown RBP14.14□□□□□ -0.15
SPIDR-203ENST00000517693 RXRBP28702 533 aa14.14□□□□□ -0.15
SPIDR-203ENST00000517693 FKBP4Q02790 459 aaKnown RBP eCLIP14.14□□□□□ -0.15
SPIDR-203ENST00000517693 SRP68Q9UHB9 627 aaKnown RBP14.14□□□□□ -0.15
SPIDR-203ENST00000517693 PALD1Q9ULE6 856 aa14.14□□□□□ -0.15
SPIDR-203ENST00000517693 PLSCR1O15162 318 aa14.13□□□□□ -0.15
SPIDR-203ENST00000517693 PHF14O94880 888 aa14.13□□□□□ -0.15
SPIDR-203ENST00000517693 ADORA1P30542 326 aa14.13□□□□□ -0.15
SPIDR-203ENST00000517693 NECTIN1Q15223 517 aa14.13□□□□□ -0.15
SPIDR-203ENST00000517693 ZMYM1Q5SVZ6 1142 aa14.13□□□□□ -0.15
SPIDR-203ENST00000517693 EDC3Q96F86 508 aaKnown RBP14.13□□□□□ -0.15
SPIDR-203ENST00000517693 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.13□□□□□ -0.15
SPIDR-203ENST00000517693 CD2BP2O95400 341 aaKnown RBP14.13□□□□□ -0.15
SPIDR-203ENST00000517693 PTH1RQ03431 593 aa14.13□□□□□ -0.15
SPIDR-203ENST00000517693 NBR1Q14596 966 aa14.13□□□□□ -0.15
SPIDR-203ENST00000517693 PRPF40BQ6NWY9 871 aaKnown RBP14.13□□□□□ -0.15
SPIDR-203ENST00000517693 UPF1Q92900 1129 aaKnown RBP eCLIP14.13□□□□□ -0.15
SPIDR-203ENST00000517693 DSCC1Q9BVC3 393 aa14.13□□□□□ -0.15
SPIDR-203ENST00000517693 SEC31BQ9NQW1 1179 aa14.13□□□□□ -0.15
SPIDR-203ENST00000517693 LRRC4BQ9NT99 713 aa14.13□□□□□ -0.15
SPIDR-203ENST00000517693 CYP46A1Q9Y6A2 500 aa14.13□□□□□ -0.15
SPIDR-203ENST00000517693 TAF5LO75529 589 aa14.12□□□□□ -0.15
SPIDR-203ENST00000517693 CHRNDQ07001 517 aa14.12□□□□□ -0.15
SPIDR-203ENST00000517693 UBE4AQ14139 1066 aa14.12□□□□□ -0.15
SPIDR-203ENST00000517693 TSGA10IPQ3SY00 556 aa14.12□□□□□ -0.15
SPIDR-203ENST00000517693 CREB3L3Q68CJ9 461 aa14.12□□□□□ -0.15
SPIDR-203ENST00000517693 CCDC102BQ68D86 513 aa14.12□□□□□ -0.15
SPIDR-203ENST00000517693 CNBD1Q8NA66 436 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms