RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 GADD45BO75293 160 aaPredicted RBP8.47□□□□□ -1.05
CTNNA1-202ENST00000517533 TRPA1O75762 1119 aa8.47□□□□□ -1.05
CTNNA1-202ENST00000517533 RARAP10276 462 aa8.47□□□□□ -1.05
CTNNA1-202ENST00000517533 ITGA6P23229 1130 aa8.47□□□□□ -1.05
CTNNA1-202ENST00000517533 TNNI2P48788 182 aa8.47□□□□□ -1.05
CTNNA1-202ENST00000517533 RACK1P63244 317 aaKnown RBP8.47□□□□□ -1.05
CTNNA1-202ENST00000517533 SPEM2Q0P670 501 aa8.47□□□□□ -1.05
CTNNA1-202ENST00000517533 KIAA0319Q5VV43 1072 aa8.47□□□□□ -1.05
CTNNA1-202ENST00000517533 C3orf58Q8NDZ4 430 aa8.47□□□□□ -1.05
CTNNA1-202ENST00000517533 BCL11AQ9H165 835 aa8.47□□□□□ -1.05
CTNNA1-202ENST00000517533 ACBD3Q9H3P7 528 aa8.47□□□□□ -1.05
CTNNA1-202ENST00000517533 MARK1Q9P0L2 795 aa8.47□□□□□ -1.05
CTNNA1-202ENST00000517533 PCDHGB7Q9Y5F8 929 aa8.47□□□□□ -1.05
CTNNA1-202ENST00000517533 SPATA32Q96LK8 384 aa8.46□□□□□ -1.06
CTNNA1-202ENST00000517533 HHIPQ96QV1 700 aa8.46□□□□□ -1.06
CTNNA1-202ENST00000517533 TINF2Q9BSI4 451 aa8.46□□□□□ -1.06
CTNNA1-202ENST00000517533 ZBTB42B2RXF5 422 aa8.45□□□□□ -1.06
CTNNA1-202ENST00000517533 GPR25O00155 361 aa8.45□□□□□ -1.06
CTNNA1-202ENST00000517533 GIPC1O14908 333 aa8.45□□□□□ -1.06
CTNNA1-202ENST00000517533 CTBSQ01459 385 aa8.45□□□□□ -1.06
CTNNA1-202ENST00000517533 MAP3K10Q02779 954 aa8.45□□□□□ -1.06
CTNNA1-202ENST00000517533 LAMC2Q13753 1193 aa8.45□□□□□ -1.06
CTNNA1-202ENST00000517533 BHMTQ93088 406 aa8.45□□□□□ -1.06
CTNNA1-202ENST00000517533 TCF12Q99081 682 aa8.45□□□□□ -1.06
CTNNA1-202ENST00000517533 SRA1Q9HD15 236 aaKnown RBP8.45□□□□□ -1.06
CTNNA1-202ENST00000517533 TLR7Q9NYK1 1049 aaKnown RBP8.45□□□□□ -1.06
CTNNA1-202ENST00000517533 FAM8A1Q9UBU6 413 aa8.45□□□□□ -1.06
CTNNA1-202ENST00000517533 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.45□□□□□ -1.06
CTNNA1-202ENST00000517533 H7C1W4 665 aa8.44□□□□□ -1.06
CTNNA1-202ENST00000517533 C2CD2LO14523 706 aa8.44□□□□□ -1.06
CTNNA1-202ENST00000517533 KIF4AO95239 1232 aa8.44□□□□□ -1.06
CTNNA1-202ENST00000517533 PTPN12Q05209 780 aaKnown RBP8.44□□□□□ -1.06
CTNNA1-202ENST00000517533 ZKSCAN3Q9BRR0 538 aa8.44□□□□□ -1.06
CTNNA1-202ENST00000517533 TGIF2Q9GZN2 237 aa8.44□□□□□ -1.06
CTNNA1-202ENST00000517533 ABCB6Q9NP58 842 aa8.44□□□□□ -1.06
CTNNA1-202ENST00000517533 COPRSQ9NQ92 184 aa8.44□□□□□ -1.06
CTNNA1-202ENST00000517533 POTECB2RU33 542 aa8.43□□□□□ -1.06
CTNNA1-202ENST00000517533 NFKBIEO00221 500 aa8.43□□□□□ -1.06
CTNNA1-202ENST00000517533 CEP120Q8N960 986 aa8.43□□□□□ -1.06
CTNNA1-202ENST00000517533 PMEPA1Q969W9 287 aa8.43□□□□□ -1.06
CTNNA1-202ENST00000517533 NSUN5Q96P11 429 aaKnown RBP8.43□□□□□ -1.06
CTNNA1-202ENST00000517533 PPP1R1BQ9UD71 204 aaPredicted RBP8.43□□□□□ -1.06
CTNNA1-202ENST00000517533 DDX41Q9UJV9 622 aaKnown RBP8.43□□□□□ -1.06
CTNNA1-202ENST00000517533 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.43□□□□□ -1.06
CTNNA1-202ENST00000517533 METTL12A8MUP2 240 aa8.42□□□□□ -1.06
CTNNA1-202ENST00000517533 PPFIA3O75145 1194 aa8.42□□□□□ -1.06
CTNNA1-202ENST00000517533 MAP3K6O95382 1288 aa8.42□□□□□ -1.06
CTNNA1-202ENST00000517533 HOXD8P13378 290 aaPredicted RBP8.42□□□□□ -1.06
CTNNA1-202ENST00000517533 FGFR3P22607 806 aa8.42□□□□□ -1.06
CTNNA1-202ENST00000517533 CANXP27824 592 aaKnown RBP8.42□□□□□ -1.06
CTNNA1-202ENST00000517533 LAPTM4AQ15012 233 aa8.42□□□□□ -1.06
CTNNA1-202ENST00000517533 TAF1CQ15572 869 aaPredicted RBP8.42□□□□□ -1.06
CTNNA1-202ENST00000517533 ADAMTSL4Q6UY14 1074 aa8.42□□□□□ -1.06
CTNNA1-202ENST00000517533 DHX32Q7L7V1 743 aaKnown RBP8.42□□□□□ -1.06
CTNNA1-202ENST00000517533 TRIM56Q9BRZ2 755 aaKnown RBP8.42□□□□□ -1.06
CTNNA1-202ENST00000517533 EHD4Q9H223 541 aa8.42□□□□□ -1.06
CTNNA1-202ENST00000517533 ATXN7L1Q9ULK2 861 aaPredicted RBP8.42□□□□□ -1.06
CTNNA1-202ENST00000517533 PHF20L1A8MW92 1017 aa8.41□□□□□ -1.06
CTNNA1-202ENST00000517533 EDN3P14138 238 aa8.41□□□□□ -1.06
CTNNA1-202ENST00000517533 SOX18P35713 384 aa8.41□□□□□ -1.06
CTNNA1-202ENST00000517533 ST13P50502 369 aaKnown RBP8.41□□□□□ -1.06
CTNNA1-202ENST00000517533 MLLT1Q03111 559 aaPredicted RBP8.41□□□□□ -1.06
CTNNA1-202ENST00000517533 PRPF40BQ6NWY9 871 aaKnown RBP8.41□□□□□ -1.06
CTNNA1-202ENST00000517533 ERMP1Q7Z2K6 904 aa8.41□□□□□ -1.06
CTNNA1-202ENST00000517533 KIFC2Q96AC6 838 aa8.41□□□□□ -1.06
CTNNA1-202ENST00000517533 SENP2Q9HC62 589 aa8.41□□□□□ -1.06
CTNNA1-202ENST00000517533 CADPSQ9ULU8 1353 aa8.4□□□□□ -1.06
CTNNA1-202ENST00000517533 F6X3S4 739 aa8.4□□□□□ -1.06
CTNNA1-202ENST00000517533 J3QW42 95 aa8.4□□□□□ -1.06
CTNNA1-202ENST00000517533 FBXO24O75426 580 aa8.4□□□□□ -1.06
CTNNA1-202ENST00000517533 GRIA4P48058 902 aa8.4□□□□□ -1.06
CTNNA1-202ENST00000517533 FCGRTP55899 365 aa8.4□□□□□ -1.06
CTNNA1-202ENST00000517533 CCNJLQ8IV13 435 aa8.4□□□□□ -1.06
CTNNA1-202ENST00000517533 VWA5B2Q8N398 1253 aa8.4□□□□□ -1.06
CTNNA1-202ENST00000517533 PNMA5Q96PV4 448 aa8.4□□□□□ -1.06
CTNNA1-202ENST00000517533 OSMRQ99650 979 aa8.4□□□□□ -1.06
CTNNA1-202ENST00000517533 SRCIN1Q9C0H9 1055 aa8.4□□□□□ -1.06
CTNNA1-202ENST00000517533 LIN7BQ9HAP6 207 aa8.4□□□□□ -1.06
CTNNA1-202ENST00000517533 DZANK1Q9NVP4 752 aa8.4□□□□□ -1.06
CTNNA1-202ENST00000517533 GGT7Q9UJ14 662 aa8.4□□□□□ -1.06
CTNNA1-202ENST00000517533 TMEM238LA0A1B0GVL6 79 aa8.39□□□□□ -1.07
CTNNA1-202ENST00000517533 PSAPP07602 524 aa8.39□□□□□ -1.07
CTNNA1-202ENST00000517533 ITGAEP38570 1179 aa8.39□□□□□ -1.07
CTNNA1-202ENST00000517533 SPRED3Q2MJR0 410 aa8.39□□□□□ -1.07
CTNNA1-202ENST00000517533 FAM182BQ5T319 152 aa8.39□□□□□ -1.07
CTNNA1-202ENST00000517533 HFE2Q6ZVN8 426 aa8.39□□□□□ -1.07
CTNNA1-202ENST00000517533 OXCT2Q9BYC2 517 aaPredicted RBP8.39□□□□□ -1.07
CTNNA1-202ENST00000517533 CCSER2Q9H7U1 834 aa8.39□□□□□ -1.07
CTNNA1-202ENST00000517533 KLF15Q9UIH9 416 aa8.39□□□□□ -1.07
CTNNA1-202ENST00000517533 CDC14CA4D256 554 aa8.38□□□□□ -1.07
CTNNA1-202ENST00000517533 GSTT1P30711 240 aa8.38□□□□□ -1.07
CTNNA1-202ENST00000517533 ATP11AP98196 1134 aa8.38□□□□□ -1.07
CTNNA1-202ENST00000517533 PLAURQ03405 335 aa8.38□□□□□ -1.07
CTNNA1-202ENST00000517533 HYAL2Q12891 473 aa8.38□□□□□ -1.07
CTNNA1-202ENST00000517533 USP48Q86UV5 1035 aa8.38□□□□□ -1.07
CTNNA1-202ENST00000517533 NCAPG2Q86XI2 1143 aa8.38□□□□□ -1.07
CTNNA1-202ENST00000517533 TRPM4Q8TD43 1214 aa8.38□□□□□ -1.07
CTNNA1-202ENST00000517533 UBXN4Q92575 508 aa8.38□□□□□ -1.07
CTNNA1-202ENST00000517533 GMCL1Q96IK5 515 aa8.38□□□□□ -1.07
CTNNA1-202ENST00000517533 CAPN10Q9HC96 672 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms