RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 CCDC144CPQ8IYA2 1237 aa12.57□□□□□ -0.4
PCDHGA1-202ENST00000517417 TANGO6Q9C0B7 1094 aa12.57□□□□□ -0.4
PCDHGA1-202ENST00000517417 SF3B2Q13435 895 aaKnown RBP12.57□□□□□ -0.4
PCDHGA1-202ENST00000517417 CFAP100Q494V2 611 aa12.57□□□□□ -0.4
PCDHGA1-202ENST00000517417 LRRC2Q9BYS8 371 aa12.57□□□□□ -0.4
PCDHGA1-202ENST00000517417 CLTCQ00610 1675 aaKnown RBP12.57□□□□□ -0.4
PCDHGA1-202ENST00000517417 FLT4P35916 1363 aa12.57□□□□□ -0.4
PCDHGA1-202ENST00000517417 SHPRHQ149N8 1683 aa12.57□□□□□ -0.4
PCDHGA1-202ENST00000517417 LMTK3Q96Q04 1460 aa12.57□□□□□ -0.4
PCDHGA1-202ENST00000517417 GOLGA8BA8MQT2 603 aa12.57□□□□□ -0.4
PCDHGA1-202ENST00000517417 STX1AQ16623 288 aa12.57□□□□□ -0.4
PCDHGA1-202ENST00000517417 IFIT3O14879 490 aaKnown RBP12.56□□□□□ -0.4
PCDHGA1-202ENST00000517417 DHX8Q14562 1220 aaKnown RBP12.56□□□□□ -0.4
PCDHGA1-202ENST00000517417 NFATC2IPQ8NCF5 419 aa12.56□□□□□ -0.4
PCDHGA1-202ENST00000517417 TTC21AQ8NDW8 1320 aa12.56□□□□□ -0.4
PCDHGA1-202ENST00000517417 CDK12Q9NYV4 1490 aaPredicted RBP12.56□□□□□ -0.4
PCDHGA1-202ENST00000517417 NEMFO60524 1076 aa12.56□□□□□ -0.4
PCDHGA1-202ENST00000517417 STIM1Q13586 685 aa12.56□□□□□ -0.4
PCDHGA1-202ENST00000517417 ODF2Q5BJF6 829 aa12.56□□□□□ -0.4
PCDHGA1-202ENST00000517417 KLHL10Q6JEL2 608 aa12.56□□□□□ -0.4
PCDHGA1-202ENST00000517417 LMBR1LQ6UX01 489 aa12.56□□□□□ -0.4
PCDHGA1-202ENST00000517417 ZNHIT6Q9NWK9 470 aaKnown RBP12.56□□□□□ -0.4
PCDHGA1-202ENST00000517417 POLR3DP05423 398 aaPredicted RBP12.56□□□□□ -0.4
PCDHGA1-202ENST00000517417 CWF19L2Q2TBE0 894 aaKnown RBP12.56□□□□□ -0.4
PCDHGA1-202ENST00000517417 HSP90AB3PQ58FF7 597 aa12.56□□□□□ -0.4
PCDHGA1-202ENST00000517417 STAP2Q9UGK3 403 aa12.56□□□□□ -0.4
PCDHGA1-202ENST00000517417 TMEM131LA2VDJ0 1609 aa12.56□□□□□ -0.4
PCDHGA1-202ENST00000517417 SMTNL1A8MU46 457 aa12.55□□□□□ -0.4
PCDHGA1-202ENST00000517417 CTAGE5O15320 804 aa12.55□□□□□ -0.4
PCDHGA1-202ENST00000517417 WASF1Q92558 559 aa12.55□□□□□ -0.4
PCDHGA1-202ENST00000517417 USP44Q9H0E7 712 aa12.55□□□□□ -0.4
PCDHGA1-202ENST00000517417 PYCARDQ9ULZ3 195 aa12.55□□□□□ -0.4
PCDHGA1-202ENST00000517417 ZC3H13Q5T200 1668 aaKnown RBP12.55□□□□□ -0.4
PCDHGA1-202ENST00000517417 CCDC171Q6TFL3 1326 aa12.55□□□□□ -0.4
PCDHGA1-202ENST00000517417 CPSF1Q10570 1443 aaKnown RBP12.55□□□□□ -0.4
PCDHGA1-202ENST00000517417 EPB41L2O43491 1005 aaKnown RBP12.55□□□□□ -0.4
PCDHGA1-202ENST00000517417 DZIP1Q86YF9 867 aaKnown RBP12.55□□□□□ -0.4
PCDHGA1-202ENST00000517417 RASEFQ8IZ41 740 aa12.55□□□□□ -0.4
PCDHGA1-202ENST00000517417 DACH1Q9UI36 760 aa12.55□□□□□ -0.4
PCDHGA1-202ENST00000517417 PATL2C9JE40 543 aaKnown RBP12.55□□□□□ -0.4
PCDHGA1-202ENST00000517417 GRM8O00222 908 aa12.55□□□□□ -0.4
PCDHGA1-202ENST00000517417 HMGB1P09429 215 aaKnown RBP12.55□□□□□ -0.4
PCDHGA1-202ENST00000517417 SLC5A1P13866 664 aa12.55□□□□□ -0.4
PCDHGA1-202ENST00000517417 SKIDA1Q1XH10 827 aa12.55□□□□□ -0.4
PCDHGA1-202ENST00000517417 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.55□□□□□ -0.4
PCDHGA1-202ENST00000517417 SLC12A7Q9Y666 1083 aa12.55□□□□□ -0.4
PCDHGA1-202ENST00000517417 V9GYY5 206 aaPredicted RBP12.55□□□□□ -0.4
PCDHGA1-202ENST00000517417 ADGRB2O60241 1585 aa12.55□□□□□ -0.4
PCDHGA1-202ENST00000517417 SKILP12757 684 aa12.55□□□□□ -0.4
PCDHGA1-202ENST00000517417 SLC4A8Q2Y0W8 1093 aa12.55□□□□□ -0.4
PCDHGA1-202ENST00000517417 FSIP1Q8NA03 581 aa12.55□□□□□ -0.4
PCDHGA1-202ENST00000517417 BRF1Q92994 677 aa12.55□□□□□ -0.4
PCDHGA1-202ENST00000517417 IQSEC3Q9UPP2 1182 aaPredicted RBP12.55□□□□□ -0.4
PCDHGA1-202ENST00000517417 MTMR6Q9Y217 621 aa12.55□□□□□ -0.4
PCDHGA1-202ENST00000517417 CAVIN2O95810 425 aa12.54□□□□□ -0.4
PCDHGA1-202ENST00000517417 CDC37L1Q7L3B6 337 aa12.54□□□□□ -0.4
PCDHGA1-202ENST00000517417 MICU3Q86XE3 530 aa12.54□□□□□ -0.4
PCDHGA1-202ENST00000517417 NEK1Q96PY6 1258 aa12.54□□□□□ -0.4
PCDHGA1-202ENST00000517417 CBX8Q9HC52 389 aa12.54□□□□□ -0.4
PCDHGA1-202ENST00000517417 USP16Q9Y5T5 823 aa12.54□□□□□ -0.4
PCDHGA1-202ENST00000517417 REREQ9P2R6 1566 aa12.54□□□□□ -0.4
PCDHGA1-202ENST00000517417 KIF2AO00139 706 aaPredicted RBP12.54□□□□□ -0.4
PCDHGA1-202ENST00000517417 MPHOSPH10O00566 681 aaKnown RBP12.54□□□□□ -0.4
PCDHGA1-202ENST00000517417 CCP110O43303 1012 aa12.54□□□□□ -0.4
PCDHGA1-202ENST00000517417 NBPF7P0C2Y1 421 aaPredicted RBP12.54□□□□□ -0.4
PCDHGA1-202ENST00000517417 SFPQP23246 707 aaKnown RBP eCLIP12.54□□□□□ -0.4
PCDHGA1-202ENST00000517417 DEF6Q9H4E7 631 aa12.54□□□□□ -0.4
PCDHGA1-202ENST00000517417 HMG20BQ9P0W2 317 aa12.54□□□□□ -0.4
PCDHGA1-202ENST00000517417 SSH3Q8TE77 659 aa12.54□□□□□ -0.4
PCDHGA1-202ENST00000517417 MAP3K5Q99683 1374 aa12.54□□□□□ -0.4
PCDHGA1-202ENST00000517417 BIN1O00499 593 aa12.54□□□□□ -0.4
PCDHGA1-202ENST00000517417 KSR2Q6VAB6 950 aa12.54□□□□□ -0.4
PCDHGA1-202ENST00000517417 IQCA1Q86XH1 822 aa12.54□□□□□ -0.4
PCDHGA1-202ENST00000517417 ZCRB1Q8TBF4 217 aaKnown RBP12.54□□□□□ -0.4
PCDHGA1-202ENST00000517417 ZNF219Q9P2Y4 722 aaPredicted RBP12.54□□□□□ -0.4
PCDHGA1-202ENST00000517417 GCP02774 474 aa12.53□□□□□ -0.4
PCDHGA1-202ENST00000517417 TAF3Q5VWG9 929 aa12.53□□□□□ -0.4
PCDHGA1-202ENST00000517417 CTCFLQ8NI51 663 aaPredicted RBP12.53□□□□□ -0.4
PCDHGA1-202ENST00000517417 A2ML1A8K2U0 1454 aa12.53□□□□□ -0.4
PCDHGA1-202ENST00000517417 ME3Q16798 604 aa12.53□□□□□ -0.4
PCDHGA1-202ENST00000517417 LSG1Q9H089 658 aaKnown RBP12.53□□□□□ -0.4
PCDHGA1-202ENST00000517417 MYO3AQ8NEV4 1616 aa12.53□□□□□ -0.4
PCDHGA1-202ENST00000517417 CCDC196A0A1B0GTZ2 297 aa12.53□□□□□ -0.4
PCDHGA1-202ENST00000517417 PTH1RQ03431 593 aa12.53□□□□□ -0.4
PCDHGA1-202ENST00000517417 TMEM132AQ24JP5 1023 aa12.53□□□□□ -0.4
PCDHGA1-202ENST00000517417 NOM1Q5C9Z4 860 aaKnown RBP12.53□□□□□ -0.4
PCDHGA1-202ENST00000517417 AKAP4Q5JQC9 854 aa12.53□□□□□ -0.4
PCDHGA1-202ENST00000517417 LIG1P18858 919 aa12.52□□□□□ -0.4
PCDHGA1-202ENST00000517417 ZNF75DP51815 510 aa12.52□□□□□ -0.4
PCDHGA1-202ENST00000517417 ZSCAN16Q9H4T2 348 aaPredicted RBP12.52□□□□□ -0.4
PCDHGA1-202ENST00000517417 GOLGA8AA7E2F4 631 aa12.52□□□□□ -0.41
PCDHGA1-202ENST00000517417 FEZ1Q99689 392 aa12.52□□□□□ -0.41
PCDHGA1-202ENST00000517417 ACBD3Q9H3P7 528 aa12.52□□□□□ -0.41
PCDHGA1-202ENST00000517417 OGFRQ9NZT2 677 aa12.52□□□□□ -0.41
PCDHGA1-202ENST00000517417 ORC3Q9UBD5 711 aaPredicted RBP12.52□□□□□ -0.41
PCDHGA1-202ENST00000517417 AK9Q5TCS8 1911 aa12.52□□□□□ -0.41
PCDHGA1-202ENST00000517417 COL3A1P02461 1466 aaPredicted RBP12.52□□□□□ -0.41
PCDHGA1-202ENST00000517417 ACSBG1Q96GR2 724 aa12.52□□□□□ -0.41
PCDHGA1-202ENST00000517417 FAM227BQ96M60 508 aa12.52□□□□□ -0.41
PCDHGA1-202ENST00000517417 BMP2KQ9NSY1 1161 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms