RNA–Protein interactions for RNA: ENST00000517352.1

TNFRSF11B-202, Transcript of TNF receptor superfamily member 11b, humanhuman

TSL 1 (best)

Gene TNFRSF11B, Length 1,144 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-202ENST00000517352 CST9Q5W186 159 aa9.5□□□□□ -0.89
TNFRSF11B-202ENST00000517352 SAPCD2Q86UD0 394 aa9.5□□□□□ -0.89
TNFRSF11B-202ENST00000517352 FBXW7Q969H0 707 aa9.5□□□□□ -0.89
TNFRSF11B-202ENST00000517352 PODXL2Q9NZ53 605 aa9.5□□□□□ -0.89
TNFRSF11B-202ENST00000517352 CACNA1SQ13698 1873 aa9.5□□□□□ -0.89
TNFRSF11B-202ENST00000517352 PSMD14O00487 310 aa9.49□□□□□ -0.89
TNFRSF11B-202ENST00000517352 ECE2O60344 883 aa9.49□□□□□ -0.89
TNFRSF11B-202ENST00000517352 UFL1O94874 794 aa9.49□□□□□ -0.89
TNFRSF11B-202ENST00000517352 RPS12P25398 132 aaKnown RBP9.49□□□□□ -0.89
TNFRSF11B-202ENST00000517352 ZNF157P51786 506 aaPredicted RBP9.49□□□□□ -0.89
TNFRSF11B-202ENST00000517352 GNAI1P63096 354 aa9.49□□□□□ -0.89
TNFRSF11B-202ENST00000517352 MLLT1Q03111 559 aaPredicted RBP9.49□□□□□ -0.89
TNFRSF11B-202ENST00000517352 NEXNQ0ZGT2 675 aa9.49□□□□□ -0.89
TNFRSF11B-202ENST00000517352 KRT24Q2M2I5 525 aa9.49□□□□□ -0.89
TNFRSF11B-202ENST00000517352 SAMD7Q7Z3H4 446 aa9.49□□□□□ -0.89
TNFRSF11B-202ENST00000517352 REM2Q8IYK8 340 aaPredicted RBP9.49□□□□□ -0.89
TNFRSF11B-202ENST00000517352 CCDC102AQ96A19 550 aa9.49□□□□□ -0.89
TNFRSF11B-202ENST00000517352 CCDC85AQ96PX6 553 aaPredicted RBP9.49□□□□□ -0.89
TNFRSF11B-202ENST00000517352 MYD88Q99836 296 aa9.49□□□□□ -0.89
TNFRSF11B-202ENST00000517352 GGA1Q9UJY5 639 aa9.49□□□□□ -0.89
TNFRSF11B-202ENST00000517352 ADAMTS8Q9UP79 889 aa9.49□□□□□ -0.89
TNFRSF11B-202ENST00000517352 SPDYE2BA6NHP3 402 aa9.48□□□□□ -0.89
TNFRSF11B-202ENST00000517352 SPDYE6P0CI01 402 aa9.48□□□□□ -0.89
TNFRSF11B-202ENST00000517352 BRPF1P55201 1214 aaPredicted RBP9.48□□□□□ -0.89
TNFRSF11B-202ENST00000517352 GPSM2P81274 684 aa9.48□□□□□ -0.89
TNFRSF11B-202ENST00000517352 TTLL12Q14166 644 aaPredicted RBP9.48□□□□□ -0.89
TNFRSF11B-202ENST00000517352 SPDYE2Q495Y8 402 aa9.48□□□□□ -0.89
TNFRSF11B-202ENST00000517352 ANKRD18AQ8IVF6 992 aa9.48□□□□□ -0.89
TNFRSF11B-202ENST00000517352 OGFOD1Q8N543 542 aa9.48□□□□□ -0.89
TNFRSF11B-202ENST00000517352 TRPM4Q8TD43 1214 aa9.48□□□□□ -0.89
TNFRSF11B-202ENST00000517352 DPF2Q92785 391 aa9.48□□□□□ -0.89
TNFRSF11B-202ENST00000517352 CELF1Q92879 486 aaKnown RBP9.48□□□□□ -0.89
TNFRSF11B-202ENST00000517352 HHIPL1Q96JK4 782 aa9.48□□□□□ -0.89
TNFRSF11B-202ENST00000517352 STK31Q9BXU1 1019 aa9.48□□□□□ -0.89
TNFRSF11B-202ENST00000517352 CWC25Q9NXE8 425 aaPredicted RBP9.48□□□□□ -0.89
TNFRSF11B-202ENST00000517352 DICER1Q9UPY3 1922 aaKnown RBP9.48□□□□□ -0.89
TNFRSF11B-202ENST00000517352 DGKZQ13574 1117 aa9.47□□□□□ -0.89
TNFRSF11B-202ENST00000517352 SF3B3Q15393 1217 aaKnown RBP9.47□□□□□ -0.89
TNFRSF11B-202ENST00000517352 KIF4BQ2VIQ3 1234 aa9.47□□□□□ -0.89
TNFRSF11B-202ENST00000517352 FAM161AQ3B820 660 aa9.47□□□□□ -0.89
TNFRSF11B-202ENST00000517352 CCDC30Q5VVM6 783 aa9.47□□□□□ -0.89
TNFRSF11B-202ENST00000517352 RGMBQ6NW40 437 aa9.47□□□□□ -0.89
TNFRSF11B-202ENST00000517352 SLC51AQ86UW1 340 aa9.47□□□□□ -0.89
TNFRSF11B-202ENST00000517352 ZBTB38Q8NAP3 1195 aaPredicted RBP9.47□□□□□ -0.89
TNFRSF11B-202ENST00000517352 TBC1D16Q8TBP0 767 aa9.47□□□□□ -0.89
TNFRSF11B-202ENST00000517352 CDC5LQ99459 802 aaKnown RBP9.47□□□□□ -0.89
TNFRSF11B-202ENST00000517352 GBA2Q9HCG7 927 aaPredicted RBP9.47□□□□□ -0.89
TNFRSF11B-202ENST00000517352 PDE8AO60658 829 aa9.46□□□□□ -0.9
TNFRSF11B-202ENST00000517352 NF2P35240 595 aa9.46□□□□□ -0.9
TNFRSF11B-202ENST00000517352 KCNJ4P48050 445 aa9.46□□□□□ -0.9
TNFRSF11B-202ENST00000517352 HIRAP54198 1017 aaPredicted RBP9.46□□□□□ -0.9
TNFRSF11B-202ENST00000517352 LRP10Q7Z4F1 713 aa9.46□□□□□ -0.9
TNFRSF11B-202ENST00000517352 CCDC191Q8NCU4 936 aa9.46□□□□□ -0.9
TNFRSF11B-202ENST00000517352 ISCA1Q9BUE6 129 aa9.46□□□□□ -0.9
TNFRSF11B-202ENST00000517352 MBIPQ9NS73 344 aa9.46□□□□□ -0.9
TNFRSF11B-202ENST00000517352 IFT57Q9NWB7 429 aa9.46□□□□□ -0.9
TNFRSF11B-202ENST00000517352 POLLQ9UGP5 575 aa9.46□□□□□ -0.9
TNFRSF11B-202ENST00000517352 TRIM35Q9UPQ4 493 aa9.46□□□□□ -0.9
TNFRSF11B-202ENST00000517352 LAMB4A4D0S4 1761 aa9.45□□□□□ -0.9
TNFRSF11B-202ENST00000517352 ARFGEF2Q9Y6D5 1785 aa9.45□□□□□ -0.9
TNFRSF11B-202ENST00000517352 YDJCA8MPS7 323 aa9.45□□□□□ -0.9
TNFRSF11B-202ENST00000517352 APAF1O14727 1248 aa9.45□□□□□ -0.9
TNFRSF11B-202ENST00000517352 USP17L8P0C7I0 530 aa9.45□□□□□ -0.9
TNFRSF11B-202ENST00000517352 GGA3Q9NZ52 723 aa9.45□□□□□ -0.9
TNFRSF11B-202ENST00000517352 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.45□□□□□ -0.9
TNFRSF11B-202ENST00000517352 PGAP2Q9UHJ9 254 aa9.45□□□□□ -0.9
TNFRSF11B-202ENST00000517352 SHTN1A0MZ66 631 aa9.44□□□□□ -0.9
TNFRSF11B-202ENST00000517352 ADM5C9JUS6 153 aa9.44□□□□□ -0.9
TNFRSF11B-202ENST00000517352 TRPA1O75762 1119 aa9.44□□□□□ -0.9
TNFRSF11B-202ENST00000517352 ATP2B4P23634 1241 aa9.44□□□□□ -0.9
TNFRSF11B-202ENST00000517352 IGHMBP2P38935 993 aaKnown RBP9.44□□□□□ -0.9
TNFRSF11B-202ENST00000517352 KIF23Q02241 960 aaPredicted RBP9.44□□□□□ -0.9
TNFRSF11B-202ENST00000517352 TRIM28Q13263 835 aaKnown RBP9.44□□□□□ -0.9
TNFRSF11B-202ENST00000517352 SCARF1Q14162 830 aa9.44□□□□□ -0.9
TNFRSF11B-202ENST00000517352 ANGEL2Q5VTE6 544 aaKnown RBP9.44□□□□□ -0.9
TNFRSF11B-202ENST00000517352 JARID2Q92833 1246 aaPredicted RBP9.44□□□□□ -0.9
TNFRSF11B-202ENST00000517352 MPHOSPH8Q99549 860 aa9.44□□□□□ -0.9
TNFRSF11B-202ENST00000517352 MCOLN1Q9GZU1 580 aa9.44□□□□□ -0.9
TNFRSF11B-202ENST00000517352 PHAXQ9H814 394 aaKnown RBP9.44□□□□□ -0.9
TNFRSF11B-202ENST00000517352 SEC31BQ9NQW1 1179 aa9.44□□□□□ -0.9
TNFRSF11B-202ENST00000517352 HDAC9Q9UKV0 1011 aa9.44□□□□□ -0.9
TNFRSF11B-202ENST00000517352 XDHP47989 1333 aa9.44□□□□□ -0.9
TNFRSF11B-202ENST00000517352 SNED1Q8TER0 1413 aa9.43□□□□□ -0.9
TNFRSF11B-202ENST00000517352 USP17L3A6NCW0 530 aa9.43□□□□□ -0.9
TNFRSF11B-202ENST00000517352 USP17L4A6NCW7 530 aa9.43□□□□□ -0.9
TNFRSF11B-202ENST00000517352 PCCAP05165 728 aaPredicted RBP9.43□□□□□ -0.9
TNFRSF11B-202ENST00000517352 RSBN1LQ6PCB5 846 aaPredicted RBP9.43□□□□□ -0.9
TNFRSF11B-202ENST00000517352 USP17L1Q7RTZ2 530 aa9.43□□□□□ -0.9
TNFRSF11B-202ENST00000517352 PODNQ7Z5L7 613 aa9.43□□□□□ -0.9
TNFRSF11B-202ENST00000517352 AGBL3Q8NEM8 1001 aa9.43□□□□□ -0.9
TNFRSF11B-202ENST00000517352 KCNQ5Q9NR82 932 aa9.43□□□□□ -0.9
TNFRSF11B-202ENST00000517352 MAP3K2Q9Y2U5 619 aa9.43□□□□□ -0.9
TNFRSF11B-202ENST00000517352 NUP98P52948 1817 aa9.42□□□□□ -0.9
TNFRSF11B-202ENST00000517352 COL4A5P29400 1685 aa9.42□□□□□ -0.9
TNFRSF11B-202ENST00000517352 VIL1P09327 827 aaKnown RBP9.42□□□□□ -0.9
TNFRSF11B-202ENST00000517352 DLK2Q6UY11 383 aa9.42□□□□□ -0.9
TNFRSF11B-202ENST00000517352 CDCA5Q96FF9 252 aa9.42□□□□□ -0.9
TNFRSF11B-202ENST00000517352 METTL22Q9BUU2 404 aaPredicted RBP9.42□□□□□ -0.9
TNFRSF11B-202ENST00000517352 MYOZ2Q9NPC6 264 aa9.42□□□□□ -0.9
TNFRSF11B-202ENST00000517352 CHMP3Q9Y3E7 222 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms