RNA–Protein interactions for RNA: ENST00000516986.1

RNU6-56P-201, Transcript of RNA, U6 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU6-56P, Length 93 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-56P-201ENST00000516986 EIF4A2Q14240 407 aaKnown RBP3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 BECN1Q14457 450 aa3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 RC3H1Q5TC82 1133 aaKnown RBP3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 CEP135Q66GS9 1140 aa3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 WWC2Q6AWC2 1192 aa3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 TTC19Q6DKK2 380 aaPredicted RBP3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 PPP4R3AQ6IN85 833 aa3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 KANK3Q6NY19 840 aa3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 KSR2Q6VAB6 950 aa3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 SYNE3Q6ZMZ3 975 aa3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 MMS22LQ6ZRQ5 1243 aa3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 SEPT14Q6ZU15 432 aa3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 TAS1R3Q7RTX0 852 aa3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 SNX32Q86XE0 403 aa3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 SPATS2Q86XZ4 545 aaKnown RBP3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 CKAP2LQ8IYA6 745 aa3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 CLASRPQ8N2M8 674 aaKnown RBP3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 PHC3Q8NDX5 983 aa3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 FAM76AQ8TAV0 307 aa3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 WDR66Q8TBY9 1149 aa3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 USP33Q8TEY7 942 aa3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 FBXO41Q8TF61 875 aa3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 HDAC7Q8WUI4 952 aa3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 E2F7Q96AV8 911 aa3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 BAG1Q99933 345 aaPredicted RBP3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 TCHPQ9BT92 498 aa3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 TRIM8Q9BZR9 551 aa3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 TRIM7Q9C029 511 aa3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 PRKRIP1Q9H875 184 aaPredicted RBP3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 SH3GLB2Q9NR46 395 aa3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 KRT82Q9NSB4 513 aa3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 PDRG1Q9NUG6 133 aa3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 FAM184BQ9ULE4 1060 aa3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 INPP5FQ9Y2H2 1132 aa3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 LUC7L2Q9Y383 392 aaKnown RBP3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 SNX5Q9Y5X3 404 aa3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 LRRFIP2Q9Y608 721 aaKnown RBP3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 NINLQ9Y2I6 1382 aa3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 H0Y3Z8 333 aa3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 K7ELQ4 463 aaPredicted RBP3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 CDC45O75419 566 aa3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 BAG4O95429 457 aaKnown RBP3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 PRR29P0C7W0 189 aa3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 IMPDH2P12268 514 aa3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 GYS1P13807 737 aa3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 FERP16591 822 aa3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 DESP17661 470 aa3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 GRK2P25098 689 aa3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 HOXD10P28358 340 aa3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 MAPK1P28482 360 aa3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 HOXC13P31276 330 aa3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 HOXD11P31277 338 aaPredicted RBP3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 CTNNA1P35221 906 aaKnown RBP3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 GNL1P36915 607 aaPredicted RBP3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 RFC5P40937 340 aa3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 SEC13P55735 322 aa3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 UBXN2AP68543 259 aa3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 SKOR1P84550 965 aa3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 DDX10Q13206 875 aaKnown RBP3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 ELOAQ14241 798 aaKnown RBP3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 FXNQ16595 210 aa3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 INF2Q27J81 1249 aa3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 Q3C1V9 767 aa3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 ZC3H12BQ5HYM0 836 aaKnown RBP3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 CFAP58Q5T655 872 aa3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 AGAP9Q5VTM2 703 aa3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 ARMC3Q5W041 872 aa3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 ANO1Q5XXA6 986 aa3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 LMBRD2Q68DH5 695 aaPredicted RBP3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 FAAH2Q6GMR7 532 aa3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 ALKBH2Q6NS38 261 aa3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 SLC4A10Q6U841 1118 aa3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 CCDC80Q76M96 950 aa3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 BTN2A1Q7KYR7 527 aa3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 RUFY3Q7L099 469 aa3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 NLRP13Q86W25 1043 aa3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 RASSF3Q86WH2 238 aa3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 NUTM1Q86Y26 1132 aa3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 CCDC65Q8IXS2 484 aa3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 PLPP6Q8IY26 295 aa3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 ENAHQ8N8S7 591 aaPredicted RBP3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 ANKRD42Q8N9B4 389 aa3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 TRIML1Q8N9V2 468 aa3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 APPL2Q8NEU8 664 aa3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 FLCNQ8NFG4 579 aa3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 SPATA18Q8TC71 538 aa3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 BRSK1Q8TDC3 778 aa3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 SH3TC2Q8TF17 1288 aa3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 TSR2Q969E8 191 aaKnown RBP3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 PGBD4Q96DM1 585 aa3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 NAF1Q96HR8 494 aaKnown RBP3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 DHTKD1Q96HY7 919 aaPredicted RBP3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 TMEM87BQ96K49 555 aa3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 FAM81BQ96LP2 452 aa3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 NAP1L3Q99457 506 aaPredicted RBP3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 MMTAG2Q9BU76 263 aaKnown RBP3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 MRPL9Q9BYD2 267 aaKnown RBP3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 LRRCC1Q9C099 1032 aa3.35□□□□□ -1.87
RNU6-56P-201ENST00000516986 DNAI2Q9GZS0 605 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms