RNA–Protein interactions for RNA: ENST00000516183.1

SCARNA17-201, small Cajal body-specific RNA 17, humanhuman

BASIC

Gene SCARNA17, Length 144 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA17-201ENST00000516183 SRPXP78539 464 aa-0.46□□□□□ -2.48
SCARNA17-201ENST00000516183 HNRNPUQ00839 825 aaKnown RBP eCLIP-0.46□□□□□ -2.481e-22■□□□□ 8.3
SCARNA17-201ENST00000516183 DEFA5Q01523 94 aa-0.46□□□□□ -2.48
SCARNA17-201ENST00000516183 TAGLNQ01995 201 aaKnown RBP-0.46□□□□□ -2.48
SCARNA17-201ENST00000516183 MAP3K12Q12852 859 aa-0.46□□□□□ -2.48
SCARNA17-201ENST00000516183 LMAN2Q12907 356 aa-0.46□□□□□ -2.48
SCARNA17-201ENST00000516183 NFATC2Q13469 925 aa-0.46□□□□□ -2.48
SCARNA17-201ENST00000516183 NFATC4Q14934 902 aa-0.46□□□□□ -2.48
SCARNA17-201ENST00000516183 RTP5Q14D33 572 aa-0.46□□□□□ -2.48
SCARNA17-201ENST00000516183 EIF4HQ15056 248 aaKnown RBP-0.46□□□□□ -2.48
SCARNA17-201ENST00000516183 SHHQ15465 462 aa-0.46□□□□□ -2.48
SCARNA17-201ENST00000516183 GEN1Q17RS7 908 aa-0.46□□□□□ -2.48
SCARNA17-201ENST00000516183 MST1LQ2TV78 715 aa-0.46□□□□□ -2.48
SCARNA17-201ENST00000516183 ZNF672Q499Z4 452 aaPredicted RBP-0.46□□□□□ -2.48
SCARNA17-201ENST00000516183 FOXB2Q5VYV0 432 aa-0.46□□□□□ -2.48
SCARNA17-201ENST00000516183 KIAA1614Q5VZ46 1190 aa-0.46□□□□□ -2.48
SCARNA17-201ENST00000516183 CRTC3Q6UUV7 619 aa-0.46□□□□□ -2.48
SCARNA17-201ENST00000516183 SHISA2Q6UWI4 295 aa-0.46□□□□□ -2.48
SCARNA17-201ENST00000516183 LAYNQ6UX15 382 aa-0.46□□□□□ -2.48
SCARNA17-201ENST00000516183 NPNTQ6UXI9 565 aa-0.46□□□□□ -2.48
SCARNA17-201ENST00000516183 FOXD4L3Q6VB84 417 aaPredicted RBP-0.46□□□□□ -2.48
SCARNA17-201ENST00000516183 THSD4Q6ZMP0 1018 aa-0.46□□□□□ -2.48
SCARNA17-201ENST00000516183 C20orf204Q6ZNR8 217 aa-0.46□□□□□ -2.48
SCARNA17-201ENST00000516183 SHISA6Q6ZSJ9 500 aa-0.46□□□□□ -2.48
SCARNA17-201ENST00000516183 HFE2Q6ZVN8 426 aa-0.46□□□□□ -2.48
SCARNA17-201ENST00000516183 SYDE1Q6ZW31 735 aaPredicted RBP-0.46□□□□□ -2.48
SCARNA17-201ENST00000516183 ATG9AQ7Z3C6 839 aa-0.46□□□□□ -2.48
SCARNA17-201ENST00000516183 C5orf24Q7Z6I8 188 aa-0.46□□□□□ -2.48
SCARNA17-201ENST00000516183 GRASPQ7Z6J2 395 aaPredicted RBP-0.46□□□□□ -2.48
SCARNA17-201ENST00000516183 RTN4RL2Q86UN3 420 aa-0.46□□□□□ -2.48
SCARNA17-201ENST00000516183 C7orf43Q8WVR3 580 aa-0.46□□□□□ -2.48
SCARNA17-201ENST00000516183 SREK1Q8WXA9 508 aaKnown RBP-0.46□□□□□ -2.48
SCARNA17-201ENST00000516183 LINC01599Q8WXQ3 324 aa-0.46□□□□□ -2.48
SCARNA17-201ENST00000516183 HOXB13Q92826 284 aaPredicted RBP-0.46□□□□□ -2.48
SCARNA17-201ENST00000516183 RADILQ96JH8 1075 aa-0.46□□□□□ -2.48
SCARNA17-201ENST00000516183 PRICKLE1Q96MT3 831 aaPredicted RBP-0.46□□□□□ -2.48
SCARNA17-201ENST00000516183 C18orf15Q96N68 181 aa-0.46□□□□□ -2.48
SCARNA17-201ENST00000516183 WDR24Q96S15 920 aa-0.46□□□□□ -2.48
SCARNA17-201ENST00000516183 SYT3Q9BQG1 590 aa-0.46□□□□□ -2.48
SCARNA17-201ENST00000516183 HERPUD2Q9BSE4 406 aa-0.46□□□□□ -2.48
SCARNA17-201ENST00000516183 ZNF577Q9BSK1 485 aa-0.46□□□□□ -2.48
SCARNA17-201ENST00000516183 INO80BQ9C086 356 aaPredicted RBP-0.46□□□□□ -2.48
SCARNA17-201ENST00000516183 PAIP1Q9H074 479 aaKnown RBP-0.46□□□□□ -2.48
SCARNA17-201ENST00000516183 PRDM12Q9H4Q4 367 aa-0.46□□□□□ -2.48
SCARNA17-201ENST00000516183 GSX1Q9H4S2 264 aaPredicted RBP-0.46□□□□□ -2.48
SCARNA17-201ENST00000516183 ANTXR1Q9H6X2 564 aa-0.46□□□□□ -2.48
SCARNA17-201ENST00000516183 TMEM8AQ9HCN3 771 aa-0.46□□□□□ -2.48
SCARNA17-201ENST00000516183 SLC2A4RGQ9NR83 387 aa-0.46□□□□□ -2.48
SCARNA17-201ENST00000516183 MDFICQ9P1T7 246 aa-0.46□□□□□ -2.48
SCARNA17-201ENST00000516183 ZBTB4Q9P1Z0 1013 aaPredicted RBP-0.46□□□□□ -2.48
SCARNA17-201ENST00000516183 NSD2O96028 1365 aa-0.46□□□□□ -2.48
SCARNA17-201ENST00000516183 COL15A1P39059 1388 aa-0.46□□□□□ -2.48
SCARNA17-201ENST00000516183 MIA3Q5JRA6 1907 aa-0.46□□□□□ -2.48
SCARNA17-201ENST00000516183 LAMB2P55268 1798 aa-0.47□□□□□ -2.48
SCARNA17-201ENST00000516183 KMT2EQ8IZD2 1858 aa-0.47□□□□□ -2.48
SCARNA17-201ENST00000516183 KIAA0100Q14667 2235 aaKnown RBP-0.47□□□□□ -2.48
SCARNA17-201ENST00000516183 A0A087WZY1 265 aa-0.47□□□□□ -2.48
SCARNA17-201ENST00000516183 MAGEB6P1A0A0J9YX57 407 aa-0.47□□□□□ -2.48
SCARNA17-201ENST00000516183 A0A0J9YXV3 536 aa-0.47□□□□□ -2.48
SCARNA17-201ENST00000516183 KRBA1A5PL33 1030 aa-0.47□□□□□ -2.48
SCARNA17-201ENST00000516183 PRR19A6NJB7 356 aa-0.47□□□□□ -2.48
SCARNA17-201ENST00000516183 A6NN06 94 aa-0.47□□□□□ -2.48
SCARNA17-201ENST00000516183 SRRM4A7MD48 611 aaKnown RBP-0.47□□□□□ -2.48
SCARNA17-201ENST00000516183 SPATA31C2B4DYI2 1134 aa-0.47□□□□□ -2.48
SCARNA17-201ENST00000516183 B8ZZF3 427 aa-0.47□□□□□ -2.48
SCARNA17-201ENST00000516183 PRRG2O14669 202 aa-0.47□□□□□ -2.48
SCARNA17-201ENST00000516183 TO15178 435 aa-0.47□□□□□ -2.48
SCARNA17-201ENST00000516183 PER1O15534 1290 aaPredicted RBP-0.47□□□□□ -2.48
SCARNA17-201ENST00000516183 ATMINO43313 823 aaPredicted RBP-0.47□□□□□ -2.48
SCARNA17-201ENST00000516183 TRIM13O60858 407 aa-0.47□□□□□ -2.48
SCARNA17-201ENST00000516183 RGS9O75916 674 aaPredicted RBP-0.47□□□□□ -2.48
SCARNA17-201ENST00000516183 ECM2O94769 699 aaPredicted RBP-0.47□□□□□ -2.48
SCARNA17-201ENST00000516183 PLEKHG5O94827 1062 aa-0.47□□□□□ -2.48
SCARNA17-201ENST00000516183 SCAF4O95104 1147 aaKnown RBP-0.47□□□□□ -2.48
SCARNA17-201ENST00000516183 LYPD3O95274 346 aa-0.47□□□□□ -2.48
SCARNA17-201ENST00000516183 PAPLNO95428 1278 aa-0.47□□□□□ -2.48
SCARNA17-201ENST00000516183 PRH1P02810 166 aa-0.47□□□□□ -2.48
SCARNA17-201ENST00000516183 F7P08709 466 aaPredicted RBP-0.47□□□□□ -2.48
SCARNA17-201ENST00000516183 EGR2P11161 476 aaPredicted RBP-0.47□□□□□ -2.48
SCARNA17-201ENST00000516183 HOXB3P14651 431 aaPredicted RBP-0.47□□□□□ -2.48
SCARNA17-201ENST00000516183 ITGB5P18084 799 aa-0.47□□□□□ -2.48
SCARNA17-201ENST00000516183 LIG1P18858 919 aa-0.47□□□□□ -2.48
SCARNA17-201ENST00000516183 IRS1P35568 1242 aa-0.47□□□□□ -2.48
SCARNA17-201ENST00000516183 NR0B1P51843 470 aaKnown RBP-0.47□□□□□ -2.48
SCARNA17-201ENST00000516183 DLX5P56178 289 aa-0.47□□□□□ -2.48
SCARNA17-201ENST00000516183 ST5P78524 1137 aa-0.47□□□□□ -2.48
SCARNA17-201ENST00000516183 FMR1Q06787 632 aaKnown RBP eCLIP-0.47□□□□□ -2.48
SCARNA17-201ENST00000516183 ADAM15Q13444 863 aa-0.47□□□□□ -2.48
SCARNA17-201ENST00000516183 PDCD2Q16342 344 aaPredicted RBP-0.47□□□□□ -2.48
SCARNA17-201ENST00000516183 PRR4Q16378 134 aa-0.47□□□□□ -2.48
SCARNA17-201ENST00000516183 CTU2Q2VPK5 515 aaKnown RBP-0.47□□□□□ -2.48
SCARNA17-201ENST00000516183 NBPF9Q3BBW0 867 aa-0.47□□□□□ -2.48
SCARNA17-201ENST00000516183 PLK5Q496M5 336 aa-0.47□□□□□ -2.48
SCARNA17-201ENST00000516183 LHX8Q68G74 356 aa-0.47□□□□□ -2.48
SCARNA17-201ENST00000516183 FAM166AQ6J272 317 aa-0.47□□□□□ -2.48
SCARNA17-201ENST00000516183 LILRA6Q6PI73 481 aa-0.47□□□□□ -2.48
SCARNA17-201ENST00000516183 MICALCLQ6ZW33 695 aa-0.47□□□□□ -2.48
SCARNA17-201ENST00000516183 ZNF589Q86UQ0 364 aaPredicted RBP-0.47□□□□□ -2.48
SCARNA17-201ENST00000516183 CHERPQ8IWX8 916 aaKnown RBP-0.47□□□□□ -2.48
SCARNA17-201ENST00000516183 TMEFF1Q8IYR6 380 aa-0.47□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms