RNA–Protein interactions for RNA: ENST00000516052.1

SCARNA20.2-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 116 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.2-201ENST00000516052 ZNF276Q8N554 614 aa-0.42□□□□□ -2.48
SCARNA20.2-201ENST00000516052 GPR150Q8NGU9 434 aa-0.42□□□□□ -2.48
SCARNA20.2-201ENST00000516052 MPLKIPQ8TAP9 179 aa-0.42□□□□□ -2.48
SCARNA20.2-201ENST00000516052 SH3RF3Q8TEJ3 882 aaPredicted RBP-0.42□□□□□ -2.48
SCARNA20.2-201ENST00000516052 USP33Q8TEY7 942 aa-0.42□□□□□ -2.48
SCARNA20.2-201ENST00000516052 LINC01599Q8WXQ3 324 aa-0.42□□□□□ -2.48
SCARNA20.2-201ENST00000516052 TRIM52Q96A61 297 aa-0.42□□□□□ -2.48
SCARNA20.2-201ENST00000516052 ZG16BQ96DA0 208 aa-0.42□□□□□ -2.48
SCARNA20.2-201ENST00000516052 CHFRQ96EP1 664 aa-0.42□□□□□ -2.48
SCARNA20.2-201ENST00000516052 ZNF845Q96IR2 970 aaPredicted RBP-0.42□□□□□ -2.48
SCARNA20.2-201ENST00000516052 ZNF668Q96K58 619 aaPredicted RBP-0.42□□□□□ -2.48
SCARNA20.2-201ENST00000516052 CNTNAP3BQ96NU0 1288 aa-0.42□□□□□ -2.48
SCARNA20.2-201ENST00000516052 CEP89Q96ST8 783 aa-0.42□□□□□ -2.48
SCARNA20.2-201ENST00000516052 SLC38A3Q99624 504 aa-0.42□□□□□ -2.48
SCARNA20.2-201ENST00000516052 SRSF8Q9BRL6 282 aaKnown RBP-0.42□□□□□ -2.48
SCARNA20.2-201ENST00000516052 RUSC1Q9BVN2 902 aa-0.42□□□□□ -2.48
SCARNA20.2-201ENST00000516052 SSBP3Q9BWW4 388 aaPredicted RBP-0.42□□□□□ -2.48
SCARNA20.2-201ENST00000516052 CNTNAP3Q9BZ76 1288 aa-0.42□□□□□ -2.48
SCARNA20.2-201ENST00000516052 IRF2BPLQ9H1B7 796 aa-0.42□□□□□ -2.48
SCARNA20.2-201ENST00000516052 TSPYL2Q9H2G4 693 aaPredicted RBP-0.42□□□□□ -2.48
SCARNA20.2-201ENST00000516052 IKZF4Q9H2S9 585 aa-0.42□□□□□ -2.48
SCARNA20.2-201ENST00000516052 ZCCHC4Q9H5U6 513 aa-0.42□□□□□ -2.48
SCARNA20.2-201ENST00000516052 C10orf95Q9H7T3 257 aa-0.42□□□□□ -2.48
SCARNA20.2-201ENST00000516052 ATP13A2Q9NQ11 1180 aa-0.42□□□□□ -2.48
SCARNA20.2-201ENST00000516052 SPINK5Q9NQ38 1064 aaPredicted RBP-0.42□□□□□ -2.48
SCARNA20.2-201ENST00000516052 PRDM9Q9NQV7 894 aa-0.42□□□□□ -2.48
SCARNA20.2-201ENST00000516052 ADARB2Q9NS39 739 aaKnown RBP-0.42□□□□□ -2.48
SCARNA20.2-201ENST00000516052 MBNL3Q9NUK0 354 aaKnown RBP-0.42□□□□□ -2.48
SCARNA20.2-201ENST00000516052 TXLNGQ9NUQ3 528 aa-0.42□□□□□ -2.48
SCARNA20.2-201ENST00000516052 DLGAP2Q9P1A6 1054 aa-0.42□□□□□ -2.48
SCARNA20.2-201ENST00000516052 ZNF219Q9P2Y4 722 aaPredicted RBP-0.42□□□□□ -2.48
SCARNA20.2-201ENST00000516052 FBLN5Q9UBX5 448 aa-0.42□□□□□ -2.48
SCARNA20.2-201ENST00000516052 ZRANB1Q9UGI0 708 aa-0.42□□□□□ -2.48
SCARNA20.2-201ENST00000516052 SUSD2Q9UGT4 822 aa-0.42□□□□□ -2.48
SCARNA20.2-201ENST00000516052 ERRFI1Q9UJM3 462 aaPredicted RBP-0.42□□□□□ -2.48
SCARNA20.2-201ENST00000516052 TINAGQ9UJW2 476 aa-0.42□□□□□ -2.48
SCARNA20.2-201ENST00000516052 ADAM29Q9UKF5 820 aa-0.42□□□□□ -2.48
SCARNA20.2-201ENST00000516052 RNF112Q9ULX5 631 aa-0.42□□□□□ -2.48
SCARNA20.2-201ENST00000516052 FZD1Q9UP38 647 aa-0.42□□□□□ -2.48
SCARNA20.2-201ENST00000516052 TRPC6Q9Y210 931 aa-0.42□□□□□ -2.48
SCARNA20.2-201ENST00000516052 COLQQ9Y215 455 aaPredicted RBP-0.42□□□□□ -2.48
SCARNA20.2-201ENST00000516052 TCAF1Q9Y4C2 921 aa-0.42□□□□□ -2.48
SCARNA20.2-201ENST00000516052 HRH3Q9Y5N1 445 aa-0.42□□□□□ -2.48
SCARNA20.2-201ENST00000516052 SMAD5-AS1Q9Y6J3 95 aa-0.42□□□□□ -2.48
SCARNA20.2-201ENST00000516052 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP-0.42□□□□□ -2.48
SCARNA20.2-201ENST00000516052 CARMIL2Q6F5E8 1435 aa-0.42□□□□□ -2.48
SCARNA20.2-201ENST00000516052 SACSQ9NZJ4 4579 aa-0.42□□□□□ -2.48
SCARNA20.2-201ENST00000516052 CFAP46Q8IYW2 2715 aa-0.42□□□□□ -2.48
SCARNA20.2-201ENST00000516052 PKD1L2Q7Z442 2459 aa-0.42□□□□□ -2.48
SCARNA20.2-201ENST00000516052 ZNF804BA4D1E1 1349 aa-0.42□□□□□ -2.48
SCARNA20.2-201ENST00000516052 APOBP04114 4563 aaKnown RBP-0.42□□□□□ -2.48
SCARNA20.2-201ENST00000516052 ZNFX1Q9P2E3 1918 aaKnown RBP-0.42□□□□□ -2.48
SCARNA20.2-201ENST00000516052 CSMD1Q96PZ7 3565 aa-0.42□□□□□ -2.48
SCARNA20.2-201ENST00000516052 LRBAP50851 2863 aa-0.43□□□□□ -2.48
SCARNA20.2-201ENST00000516052 TRIOO75962 3097 aa-0.43□□□□□ -2.48
SCARNA20.2-201ENST00000516052 ATMQ13315 3056 aa-0.43□□□□□ -2.48
SCARNA20.2-201ENST00000516052 CEP295Q9C0D2 2601 aa-0.43□□□□□ -2.48
SCARNA20.2-201ENST00000516052 PKD1P98161 4303 aa-0.43□□□□□ -2.48
SCARNA20.2-201ENST00000516052 ALMS1Q8TCU4 4167 aa-0.43□□□□□ -2.48
SCARNA20.2-201ENST00000516052 ACACBO00763 2458 aa-0.43□□□□□ -2.48
SCARNA20.2-201ENST00000516052 PRKDCP78527 4128 aaKnown RBP-0.43□□□□□ -2.48
SCARNA20.2-201ENST00000516052 FREM2Q5SZK8 3169 aa-0.43□□□□□ -2.48
SCARNA20.2-201ENST00000516052 A0A0A6YYK5 440 aaPredicted RBP-0.43□□□□□ -2.48
SCARNA20.2-201ENST00000516052 KIR2DL5BA0A0G2JN68 375 aa-0.43□□□□□ -2.48
SCARNA20.2-201ENST00000516052 KIR2DL5BA0A0G2JPC4 375 aa-0.43□□□□□ -2.48
SCARNA20.2-201ENST00000516052 ANTXRLA6NF34 631 aa-0.43□□□□□ -2.48
SCARNA20.2-201ENST00000516052 MANSC4A6NHS7 340 aaPredicted RBP-0.43□□□□□ -2.48
SCARNA20.2-201ENST00000516052 B9A039 149 aa-0.43□□□□□ -2.48
SCARNA20.2-201ENST00000516052 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP-0.43□□□□□ -2.48
SCARNA20.2-201ENST00000516052 TGFBR3LH3BV60 316 aa-0.43□□□□□ -2.48
SCARNA20.2-201ENST00000516052 MASP2O00187 686 aa-0.43□□□□□ -2.48
SCARNA20.2-201ENST00000516052 ARVCFO00192 962 aa-0.43□□□□□ -2.48
SCARNA20.2-201ENST00000516052 OIP5O43482 229 aa-0.43□□□□□ -2.48
SCARNA20.2-201ENST00000516052 ABLIM3O94929 683 aa-0.43□□□□□ -2.48
SCARNA20.2-201ENST00000516052 PAPLNO95428 1278 aa-0.43□□□□□ -2.48
SCARNA20.2-201ENST00000516052 TSPAN15O95858 294 aa-0.43□□□□□ -2.48
SCARNA20.2-201ENST00000516052 P0C879 139 aa-0.43□□□□□ -2.48
SCARNA20.2-201ENST00000516052 CGB3P0DN86 165 aa-0.43□□□□□ -2.48
SCARNA20.2-201ENST00000516052 THRBP10828 461 aa-0.43□□□□□ -2.48
SCARNA20.2-201ENST00000516052 CDK4P11802 303 aa-0.43□□□□□ -2.48
SCARNA20.2-201ENST00000516052 HGFP14210 728 aa-0.43□□□□□ -2.48
SCARNA20.2-201ENST00000516052 ZNF37AP17032 561 aaPredicted RBP-0.43□□□□□ -2.48
SCARNA20.2-201ENST00000516052 BMP7P18075 431 aa-0.43□□□□□ -2.48
SCARNA20.2-201ENST00000516052 COL8A2P25067 703 aa-0.43□□□□□ -2.48
SCARNA20.2-201ENST00000516052 GRNP28799 593 aaKnown RBP-0.43□□□□□ -2.48
SCARNA20.2-201ENST00000516052 GATA4P43694 442 aa-0.43□□□□□ -2.48
SCARNA20.2-201ENST00000516052 NKX2-1P43699 371 aaPredicted RBP-0.43□□□□□ -2.48
SCARNA20.2-201ENST00000516052 C21orf58P58505 322 aa-0.43□□□□□ -2.48
SCARNA20.2-201ENST00000516052 PRR20EP86478 221 aa-0.43□□□□□ -2.48
SCARNA20.2-201ENST00000516052 PRR20CP86479 221 aa-0.43□□□□□ -2.48
SCARNA20.2-201ENST00000516052 PRR20DP86480 221 aa-0.43□□□□□ -2.48
SCARNA20.2-201ENST00000516052 PRR20BP86481 221 aa-0.43□□□□□ -2.48
SCARNA20.2-201ENST00000516052 PRR20AP86496 221 aa-0.43□□□□□ -2.48
SCARNA20.2-201ENST00000516052 SRSF11Q05519 484 aaKnown RBP-0.43□□□□□ -2.48
SCARNA20.2-201ENST00000516052 FMR1Q06787 632 aaKnown RBP eCLIP-0.43□□□□□ -2.48
SCARNA20.2-201ENST00000516052 MESP2Q0VG99 397 aa-0.43□□□□□ -2.48
SCARNA20.2-201ENST00000516052 FHL2Q14192 279 aa-0.43□□□□□ -2.48
SCARNA20.2-201ENST00000516052 KIF22Q14807 665 aa-0.43□□□□□ -2.48
SCARNA20.2-201ENST00000516052 VPS72Q15906 364 aa-0.43□□□□□ -2.48
SCARNA20.2-201ENST00000516052 SWI5Q1ZZU3 235 aa-0.43□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms