RNA–Protein interactions for RNA: ENST00000515682.5

SH3TC1-225, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 4,293 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-225ENST00000515682 APOBRQ0VD83 1088 aa15.77■□□□□ 0.12
SH3TC1-225ENST00000515682 LRRFIP1Q32MZ4 808 aaKnown RBP15.77■□□□□ 0.12
SH3TC1-225ENST00000515682 NOM1Q5C9Z4 860 aaKnown RBP15.77■□□□□ 0.12
SH3TC1-225ENST00000515682 MRPS27Q92552 414 aaKnown RBP15.77■□□□□ 0.12
SH3TC1-225ENST00000515682 CASQ1P31415 396 aa15.77■□□□□ 0.12
SH3TC1-225ENST00000515682 AKAP4Q5JQC9 854 aa15.77■□□□□ 0.12
SH3TC1-225ENST00000515682 HOOK1Q9UJC3 728 aaKnown RBP15.77■□□□□ 0.12
SH3TC1-225ENST00000515682 HAND2P61296 217 aa15.77■□□□□ 0.11
SH3TC1-225ENST00000515682 CCDC85AQ96PX6 553 aaPredicted RBP15.77■□□□□ 0.11
SH3TC1-225ENST00000515682 ZSWIM6Q9HCJ5 1215 aa15.77■□□□□ 0.11
SH3TC1-225ENST00000515682 PRR36Q9H6K5 1346 aa15.77■□□□□ 0.11
SH3TC1-225ENST00000515682 RASSF8Q8NHQ8 419 aa15.77■□□□□ 0.11
SH3TC1-225ENST00000515682 NCOA5Q9HCD5 579 aaKnown RBP15.77■□□□□ 0.11
SH3TC1-225ENST00000515682 HMG20BQ9P0W2 317 aa15.77■□□□□ 0.11
SH3TC1-225ENST00000515682 U3KPZ7 1027 aaPredicted RBP15.77■□□□□ 0.11
SH3TC1-225ENST00000515682 ATP10DQ9P241 1426 aa15.76■□□□□ 0.11
SH3TC1-225ENST00000515682 DHX16O60231 1041 aaKnown RBP15.76■□□□□ 0.11
SH3TC1-225ENST00000515682 TMEM94Q12767 1356 aa15.76■□□□□ 0.11
SH3TC1-225ENST00000515682 UBASH3AP57075 661 aa15.76■□□□□ 0.11
SH3TC1-225ENST00000515682 CPLX3Q8WVH0 158 aa15.76■□□□□ 0.11
SH3TC1-225ENST00000515682 PTPDC1A2A3K4 754 aa15.76■□□□□ 0.11
SH3TC1-225ENST00000515682 AP5Z1O43299 807 aa15.76■□□□□ 0.11
SH3TC1-225ENST00000515682 ZSCAN12O43309 604 aa15.76■□□□□ 0.11
SH3TC1-225ENST00000515682 FTOQ9C0B1 505 aaKnown RBP eCLIP15.76■□□□□ 0.11
SH3TC1-225ENST00000515682 CTNNA3Q9UI47 895 aa15.76■□□□□ 0.11
SH3TC1-225ENST00000515682 SBNO1A3KN83 1393 aa15.76■□□□□ 0.11
SH3TC1-225ENST00000515682 RPAP1Q9BWH6 1393 aaPredicted RBP15.76■□□□□ 0.11
SH3TC1-225ENST00000515682 MARCKSP29966 332 aaPredicted RBP15.75■□□□□ 0.11
SH3TC1-225ENST00000515682 C11orf57Q6ZUT1 292 aaPredicted RBP15.75■□□□□ 0.11
SH3TC1-225ENST00000515682 NPHP4O75161 1426 aaPredicted RBP15.75■□□□□ 0.11
SH3TC1-225ENST00000515682 GOLIM4O00461 696 aa15.75■□□□□ 0.11
SH3TC1-225ENST00000515682 MCM6Q14566 821 aa15.75■□□□□ 0.11
SH3TC1-225ENST00000515682 CCDC144BQ3MJ40 725 aa15.75■□□□□ 0.11
SH3TC1-225ENST00000515682 CCDC144CPQ8IYA2 1237 aa15.75■□□□□ 0.11
SH3TC1-225ENST00000515682 MYD88Q99836 296 aa15.75■□□□□ 0.11
SH3TC1-225ENST00000515682 QRICH2Q9H0J4 1663 aa15.75■□□□□ 0.11
SH3TC1-225ENST00000515682 OTUD7BQ6GQQ9 843 aa15.75■□□□□ 0.11
SH3TC1-225ENST00000515682 FBXO38Q6PIJ6 1188 aa15.75■□□□□ 0.11
SH3TC1-225ENST00000515682 UTP14AQ9BVJ6 771 aaKnown RBP15.75■□□□□ 0.11
SH3TC1-225ENST00000515682 PNPLA6Q8IY17 1366 aa15.75■□□□□ 0.11
SH3TC1-225ENST00000515682 A0A0D9SFI3 127 aa15.74■□□□□ 0.11
SH3TC1-225ENST00000515682 USP27XA6NNY8 438 aa15.74■□□□□ 0.11
SH3TC1-225ENST00000515682 TDRD7Q8NHU6 1098 aaKnown RBP15.74■□□□□ 0.11
SH3TC1-225ENST00000515682 CARD6Q9BX69 1037 aa15.74■□□□□ 0.11
SH3TC1-225ENST00000515682 MYOM1P52179 1685 aa15.74■□□□□ 0.11
SH3TC1-225ENST00000515682 TULP4Q9NRJ4 1543 aa15.74■□□□□ 0.11
SH3TC1-225ENST00000515682 C10orf67Q8IYJ2 551 aa15.74■□□□□ 0.11
SH3TC1-225ENST00000515682 JMYQ8N9B5 988 aa15.74■□□□□ 0.11
SH3TC1-225ENST00000515682 NFATC2IPQ8NCF5 419 aa15.74■□□□□ 0.11
SH3TC1-225ENST00000515682 TM6SF1Q9BZW5 370 aa15.74■□□□□ 0.11
SH3TC1-225ENST00000515682 DDX41Q9UJV9 622 aaKnown RBP15.74■□□□□ 0.11
SH3TC1-225ENST00000515682 NEK11Q8NG66 645 aa15.74■□□□□ 0.11
SH3TC1-225ENST00000515682 CNNM1Q9NRU3 951 aa15.74■□□□□ 0.11
SH3TC1-225ENST00000515682 FAM160A1Q05DH4 1040 aa15.73■□□□□ 0.11
SH3TC1-225ENST00000515682 CCDC57Q2TAC2 916 aa15.73■□□□□ 0.11
SH3TC1-225ENST00000515682 PI4K2BQ8TCG2 481 aa15.73■□□□□ 0.11
SH3TC1-225ENST00000515682 TTC14Q96N46 770 aa15.73■□□□□ 0.11
SH3TC1-225ENST00000515682 C8orf37Q96NL8 207 aa15.73■□□□□ 0.11
SH3TC1-225ENST00000515682 ARFGAP3Q9NP61 516 aa15.73■□□□□ 0.11
SH3TC1-225ENST00000515682 ORC3Q9UBD5 711 aaPredicted RBP15.73■□□□□ 0.11
SH3TC1-225ENST00000515682 DHX8Q14562 1220 aaKnown RBP15.73■□□□□ 0.11
SH3TC1-225ENST00000515682 SAFBQ15424 915 aaKnown RBP eCLIP15.73■□□□□ 0.11
SH3TC1-225ENST00000515682 KLHL10Q6JEL2 608 aa15.73■□□□□ 0.11
SH3TC1-225ENST00000515682 CCDC12Q8WUD4 166 aaPredicted RBP15.73■□□□□ 0.11
SH3TC1-225ENST00000515682 GOLGA8BA8MQT2 603 aa15.73■□□□□ 0.11
SH3TC1-225ENST00000515682 SNRPA1P09661 255 aaKnown RBP15.73■□□□□ 0.11
SH3TC1-225ENST00000515682 EVCP57679 992 aa15.73■□□□□ 0.11
SH3TC1-225ENST00000515682 TSR1Q2NL82 804 aaKnown RBP15.73■□□□□ 0.11
SH3TC1-225ENST00000515682 NBPF6Q5VWK0 638 aa15.73■□□□□ 0.11
SH3TC1-225ENST00000515682 PPFIBP1Q86W92 1011 aa15.73■□□□□ 0.11
SH3TC1-225ENST00000515682 NBPF4Q96M43 638 aa15.73■□□□□ 0.11
SH3TC1-225ENST00000515682 ZBTB3Q9H5J0 574 aa15.73■□□□□ 0.11
SH3TC1-225ENST00000515682 BICDL1Q6ZP65 573 aa15.72■□□□□ 0.11
SH3TC1-225ENST00000515682 XPO4Q9C0E2 1151 aaKnown RBP15.72■□□□□ 0.11
SH3TC1-225ENST00000515682 ST7Q9NRC1 585 aa15.72■□□□□ 0.11
SH3TC1-225ENST00000515682 IL2RBP14784 551 aa15.72■□□□□ 0.11
SH3TC1-225ENST00000515682 CCDC191Q8NCU4 936 aa15.72■□□□□ 0.11
SH3TC1-225ENST00000515682 ACBD3Q9H3P7 528 aa15.72■□□□□ 0.11
SH3TC1-225ENST00000515682 BTG4Q9NY30 223 aa15.72■□□□□ 0.11
SH3TC1-225ENST00000515682 GRM8O00222 908 aa15.72■□□□□ 0.11
SH3TC1-225ENST00000515682 EPB41L2O43491 1005 aaKnown RBP15.72■□□□□ 0.11
SH3TC1-225ENST00000515682 FAM193AP78312 1265 aa15.72■□□□□ 0.11
SH3TC1-225ENST00000515682 TERF2Q15554 542 aa15.72■□□□□ 0.11
SH3TC1-225ENST00000515682 KIF4BQ2VIQ3 1234 aa15.72■□□□□ 0.11
SH3TC1-225ENST00000515682 KARSQ15046 597 aaKnown RBP15.71■□□□□ 0.11
SH3TC1-225ENST00000515682 KMT5BQ4FZB7 885 aa15.71■□□□□ 0.11
SH3TC1-225ENST00000515682 JAKMIP3Q5VZ66 844 aa15.71■□□□□ 0.11
SH3TC1-225ENST00000515682 KRBA2Q6ZNG9 492 aa15.71■□□□□ 0.11
SH3TC1-225ENST00000515682 ANKRD7Q92527 254 aa15.71■□□□□ 0.11
SH3TC1-225ENST00000515682 RNF216Q9NWF9 866 aaPredicted RBP15.71■□□□□ 0.11
SH3TC1-225ENST00000515682 DIP2CQ9Y2E4 1556 aa15.71■□□□□ 0.11
SH3TC1-225ENST00000515682 PIP4K2AP48426 406 aaPredicted RBP15.71■□□□□ 0.11
SH3TC1-225ENST00000515682 USP28Q96RU2 1077 aa15.71■□□□□ 0.11
SH3TC1-225ENST00000515682 SNRKQ9NRH2 765 aa15.71■□□□□ 0.11
SH3TC1-225ENST00000515682 ERLIN1O75477 346 aa15.71■□□□□ 0.11
SH3TC1-225ENST00000515682 TXLNBQ8N3L3 684 aa15.71■□□□□ 0.11
SH3TC1-225ENST00000515682 BICC1Q9H694 974 aaKnown RBP15.71■□□□□ 0.11
SH3TC1-225ENST00000515682 ATP5J2-PTCD1G3V325 749 aa15.71■□□□□ 0.1
SH3TC1-225ENST00000515682 EIF3JO75822 258 aaKnown RBP15.71■□□□□ 0.1
SH3TC1-225ENST00000515682 UBE3BQ7Z3V4 1068 aa15.71■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms