RNA–Protein interactions for RNA: ENST00000515533.1

CDC42SE2-212, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-212ENST00000515533 CAMTA2O94983 1202 aa11.85□□□□□ -0.51
CDC42SE2-212ENST00000515533 U2AF1L5P0DN76 240 aaPredicted RBP11.85□□□□□ -0.51
CDC42SE2-212ENST00000515533 PRELPP51888 382 aa11.85□□□□□ -0.51
CDC42SE2-212ENST00000515533 U2AF1Q01081 240 aaKnown RBP eCLIP11.85□□□□□ -0.51
CDC42SE2-212ENST00000515533 NKX2-3Q8TAU0 364 aa11.85□□□□□ -0.51
CDC42SE2-212ENST00000515533 CNKSR1Q969H4 720 aa11.85□□□□□ -0.51
CDC42SE2-212ENST00000515533 KDM3BQ7LBC6 1761 aa11.84□□□□□ -0.51
CDC42SE2-212ENST00000515533 KCNQ3O43525 872 aa11.84□□□□□ -0.51
CDC42SE2-212ENST00000515533 OSBPP22059 807 aa11.84□□□□□ -0.51
CDC42SE2-212ENST00000515533 ERFEQ4G0M1 354 aa11.84□□□□□ -0.51
CDC42SE2-212ENST00000515533 SOGA3Q5TF21 947 aa11.84□□□□□ -0.51
CDC42SE2-212ENST00000515533 TAOK3Q9H2K8 898 aa11.84□□□□□ -0.51
CDC42SE2-212ENST00000515533 ZNF652Q9Y2D9 606 aa11.84□□□□□ -0.51
CDC42SE2-212ENST00000515533 SNRPA1P09661 255 aaKnown RBP11.83□□□□□ -0.52
CDC42SE2-212ENST00000515533 PIP4K2AP48426 406 aaPredicted RBP11.83□□□□□ -0.52
CDC42SE2-212ENST00000515533 MCM10Q7L590 875 aa11.83□□□□□ -0.52
CDC42SE2-212ENST00000515533 NBPF5PQ86XG9 351 aaPredicted RBP11.83□□□□□ -0.52
CDC42SE2-212ENST00000515533 USP16Q9Y5T5 823 aa11.83□□□□□ -0.52
CDC42SE2-212ENST00000515533 NEFMP07197 916 aa11.82□□□□□ -0.52
CDC42SE2-212ENST00000515533 SRGNP10124 158 aa11.82□□□□□ -0.52
CDC42SE2-212ENST00000515533 PPP2R1AP30153 589 aa11.82□□□□□ -0.52
CDC42SE2-212ENST00000515533 STYK1Q6J9G0 422 aa11.82□□□□□ -0.52
CDC42SE2-212ENST00000515533 PRPF40BQ6NWY9 871 aaKnown RBP11.82□□□□□ -0.52
CDC42SE2-212ENST00000515533 CLEC4GQ6UXB4 293 aa11.82□□□□□ -0.52
CDC42SE2-212ENST00000515533 JMYQ8N9B5 988 aa11.82□□□□□ -0.52
CDC42SE2-212ENST00000515533 MASTLQ96GX5 879 aa11.82□□□□□ -0.52
CDC42SE2-212ENST00000515533 LTBP3Q9NS15 1303 aa11.82□□□□□ -0.52
CDC42SE2-212ENST00000515533 TTC13Q8NBP0 860 aa11.81□□□□□ -0.52
CDC42SE2-212ENST00000515533 NECTIN2Q92692 538 aa11.81□□□□□ -0.52
CDC42SE2-212ENST00000515533 PRAMEF22A3QJZ6 481 aa11.8□□□□□ -0.52
CDC42SE2-212ENST00000515533 HTATSF1O43719 755 aaKnown RBP11.8□□□□□ -0.52
CDC42SE2-212ENST00000515533 COPS2P61201 443 aa11.8□□□□□ -0.52
CDC42SE2-212ENST00000515533 DCTN1Q14203 1278 aa11.8□□□□□ -0.52
CDC42SE2-212ENST00000515533 SWT1Q5T5J6 900 aaKnown RBP11.8□□□□□ -0.52
CDC42SE2-212ENST00000515533 NIP7Q9Y221 180 aaKnown RBP eCLIP11.8□□□□□ -0.52
CDC42SE2-212ENST00000515533 GGCXP38435 758 aa11.79□□□□□ -0.52
CDC42SE2-212ENST00000515533 CCDC93Q567U6 631 aa11.79□□□□□ -0.52
CDC42SE2-212ENST00000515533 TPTE2Q6XPS3 522 aa11.79□□□□□ -0.52
CDC42SE2-212ENST00000515533 FAM177BA6PVY3 158 aa11.78□□□□□ -0.52
CDC42SE2-212ENST00000515533 POTECB2RU33 542 aa11.78□□□□□ -0.52
CDC42SE2-212ENST00000515533 NPR1P16066 1061 aa11.78□□□□□ -0.52
CDC42SE2-212ENST00000515533 GTF2E1P29083 439 aaPredicted RBP11.78□□□□□ -0.52
CDC42SE2-212ENST00000515533 TAF7Q15545 349 aaPredicted RBP11.78□□□□□ -0.52
CDC42SE2-212ENST00000515533 SLF2Q8IX21 1173 aa11.78□□□□□ -0.52
CDC42SE2-212ENST00000515533 IQCA1LA6NCM1 817 aa11.77□□□□□ -0.53
CDC42SE2-212ENST00000515533 DDNO94850 711 aaPredicted RBP11.77□□□□□ -0.53
CDC42SE2-212ENST00000515533 ZNF787Q6DD87 383 aa11.77□□□□□ -0.53
CDC42SE2-212ENST00000515533 NBPF10Q6P3W6 841 aaKnown RBP11.77□□□□□ -0.53
CDC42SE2-212ENST00000515533 PADI6Q6TGC4 694 aa11.77□□□□□ -0.53
CDC42SE2-212ENST00000515533 NBPF15Q8N660 670 aa11.77□□□□□ -0.53
CDC42SE2-212ENST00000515533 ANKRD36CQ5JPF3 1778 aa11.77□□□□□ -0.53
CDC42SE2-212ENST00000515533 FKBP4Q02790 459 aaKnown RBP eCLIP11.76□□□□□ -0.53
CDC42SE2-212ENST00000515533 COL13A1Q5TAT6 717 aaPredicted RBP11.76□□□□□ -0.53
CDC42SE2-212ENST00000515533 PNISRQ8TF01 805 aaKnown RBP11.76□□□□□ -0.53
CDC42SE2-212ENST00000515533 TMUB1Q9BVT8 246 aa11.76□□□□□ -0.53
CDC42SE2-212ENST00000515533 NPDC1Q9NQX5 325 aaPredicted RBP11.76□□□□□ -0.53
CDC42SE2-212ENST00000515533 HSPA1AP0DMV8 641 aaKnown RBP11.75□□□□□ -0.53
CDC42SE2-212ENST00000515533 HSPA1BP0DMV9 641 aaKnown RBP11.75□□□□□ -0.53
CDC42SE2-212ENST00000515533 ALDH1B1P30837 517 aa11.75□□□□□ -0.53
CDC42SE2-212ENST00000515533 RTKN2Q8IZC4 609 aa11.75□□□□□ -0.53
CDC42SE2-212ENST00000515533 NGEFQ8N5V2 710 aa11.75□□□□□ -0.53
CDC42SE2-212ENST00000515533 NYXQ9GZU5 481 aa11.75□□□□□ -0.53
CDC42SE2-212ENST00000515533 WDR70Q9NW82 654 aa11.75□□□□□ -0.53
CDC42SE2-212ENST00000515533 MIS18AQ9NYP9 233 aa11.75□□□□□ -0.53
CDC42SE2-212ENST00000515533 TRPM7Q96QT4 1865 aa11.74□□□□□ -0.53
CDC42SE2-212ENST00000515533 KLRG2A4D1S0 409 aaPredicted RBP11.74□□□□□ -0.53
CDC42SE2-212ENST00000515533 HLFQ16534 295 aa11.74□□□□□ -0.53
CDC42SE2-212ENST00000515533 KIF6Q6ZMV9 814 aa11.74□□□□□ -0.53
CDC42SE2-212ENST00000515533 TNS4Q8IZW8 715 aa11.74□□□□□ -0.53
CDC42SE2-212ENST00000515533 C7orf43Q8WVR3 580 aa11.74□□□□□ -0.53
CDC42SE2-212ENST00000515533 ZNF775Q96BV0 537 aaPredicted RBP11.74□□□□□ -0.53
CDC42SE2-212ENST00000515533 PNNQ9H307 717 aaKnown RBP11.74□□□□□ -0.53
CDC42SE2-212ENST00000515533 ZNF277Q9NRM2 450 aaPredicted RBP11.74□□□□□ -0.53
CDC42SE2-212ENST00000515533 MAPK8IP3Q9UPT6 1336 aa11.74□□□□□ -0.53
CDC42SE2-212ENST00000515533 LAMB2P55268 1798 aa11.74□□□□□ -0.53
CDC42SE2-212ENST00000515533 LDHDQ86WU2 507 aa11.73□□□□□ -0.53
CDC42SE2-212ENST00000515533 ADAMTSL1Q8N6G6 1762 aa11.73□□□□□ -0.53
CDC42SE2-212ENST00000515533 TAF1DQ9H5J8 278 aaPredicted RBP11.73□□□□□ -0.53
CDC42SE2-212ENST00000515533 RRP7AQ9Y3A4 280 aaKnown RBP11.73□□□□□ -0.53
CDC42SE2-212ENST00000515533 ABCC12Q96J65 1359 aa11.72□□□□□ -0.53
CDC42SE2-212ENST00000515533 MAP3K15Q6ZN16 1313 aa11.72□□□□□ -0.53
CDC42SE2-212ENST00000515533 ZNF541Q9H0D2 1346 aa11.72□□□□□ -0.53
CDC42SE2-212ENST00000515533 ERVV-1B6SEH8 477 aa11.72□□□□□ -0.53
CDC42SE2-212ENST00000515533 MYL6BP14649 208 aa11.72□□□□□ -0.53
CDC42SE2-212ENST00000515533 IARSP41252 1262 aaKnown RBP11.72□□□□□ -0.53
CDC42SE2-212ENST00000515533 NFE2L2Q16236 605 aa11.72□□□□□ -0.53
CDC42SE2-212ENST00000515533 EAPPQ56P03 285 aaPredicted RBP11.72□□□□□ -0.53
CDC42SE2-212ENST00000515533 OLFM4Q6UX06 510 aa11.72□□□□□ -0.53
CDC42SE2-212ENST00000515533 NUTM1Q86Y26 1132 aa11.72□□□□□ -0.53
CDC42SE2-212ENST00000515533 RPGRQ92834 1020 aaKnown RBP11.72□□□□□ -0.53
CDC42SE2-212ENST00000515533 MKRN1Q9UHC7 482 aaKnown RBP11.72□□□□□ -0.53
CDC42SE2-212ENST00000515533 JDP2Q8WYK2 163 aa11.71□□□□□ -0.53
CDC42SE2-212ENST00000515533 HACL1Q9UJ83 578 aa11.71□□□□□ -0.53
CDC42SE2-212ENST00000515533 RIC1Q4ADV7 1423 aa11.7□□□□□ -0.54
CDC42SE2-212ENST00000515533 TAF1P21675 1872 aa11.7□□□□□ -0.54
CDC42SE2-212ENST00000515533 IBTKQ9P2D0 1353 aaPredicted RBP11.7□□□□□ -0.54
CDC42SE2-212ENST00000515533 RNF123Q5XPI4 1314 aa11.7□□□□□ -0.54
CDC42SE2-212ENST00000515533 GPTP24298 496 aa11.7□□□□□ -0.54
CDC42SE2-212ENST00000515533 SLC4A3P48751 1232 aa11.7□□□□□ -0.54
CDC42SE2-212ENST00000515533 EIF4A1P60842 406 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms