RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 LCE1DQ5T752 114 aa7.24□□□□□ -1.25
CLDND1-228ENST00000513873 ZNF468Q5VIY5 522 aaPredicted RBP7.24□□□□□ -1.25
CLDND1-228ENST00000513873 BHMTQ93088 406 aa7.24□□□□□ -1.25
CLDND1-228ENST00000513873 ANO2Q9NQ90 1003 aa7.24□□□□□ -1.25
CLDND1-228ENST00000513873 NEURL1BA8MQ27 555 aa7.23□□□□□ -1.25
CLDND1-228ENST00000513873 C2CD2LO14523 706 aa7.23□□□□□ -1.25
CLDND1-228ENST00000513873 OPLAHO14841 1288 aa7.23□□□□□ -1.25
CLDND1-228ENST00000513873 ALAS2P22557 587 aa7.23□□□□□ -1.25
CLDND1-228ENST00000513873 PCBP4P57723 403 aaKnown RBP7.23□□□□□ -1.25
CLDND1-228ENST00000513873 ZNF211Q13398 564 aaPredicted RBP7.23□□□□□ -1.25
CLDND1-228ENST00000513873 MCTP1Q6DN14 999 aa7.23□□□□□ -1.25
CLDND1-228ENST00000513873 SYT9Q86SS6 491 aa7.23□□□□□ -1.25
CLDND1-228ENST00000513873 GPR152Q8TDT2 470 aa7.23□□□□□ -1.25
CLDND1-228ENST00000513873 KIF13AQ9H1H9 1805 aa7.22□□□□□ -1.25
CLDND1-228ENST00000513873 H3BRB1 525 aa7.22□□□□□ -1.25
CLDND1-228ENST00000513873 HYAL3O43820 417 aaPredicted RBP7.22□□□□□ -1.25
CLDND1-228ENST00000513873 XYLBO75191 536 aa7.22□□□□□ -1.25
CLDND1-228ENST00000513873 MPSTP25325 297 aa7.22□□□□□ -1.25
CLDND1-228ENST00000513873 SERPINB4P48594 390 aa7.22□□□□□ -1.25
CLDND1-228ENST00000513873 MTMR3Q13615 1198 aa7.22□□□□□ -1.25
CLDND1-228ENST00000513873 AEBP1Q8IUX7 1158 aa7.22□□□□□ -1.25
CLDND1-228ENST00000513873 FBXO41Q8TF61 875 aa7.22□□□□□ -1.25
CLDND1-228ENST00000513873 NACC1Q96RE7 527 aa7.22□□□□□ -1.25
CLDND1-228ENST00000513873 SLC30A3Q99726 388 aa7.22□□□□□ -1.25
CLDND1-228ENST00000513873 GSX2Q9BZM3 304 aa7.22□□□□□ -1.25
CLDND1-228ENST00000513873 IGFLR1Q9H665 355 aa7.22□□□□□ -1.25
CLDND1-228ENST00000513873 TUT1Q9H6E5 874 aaKnown RBP7.22□□□□□ -1.25
CLDND1-228ENST00000513873 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.22□□□□□ -1.25
CLDND1-228ENST00000513873 ERCC6L2Q5T890 1561 aa7.21□□□□□ -1.25
CLDND1-228ENST00000513873 UBAP1LF5GYI3 381 aa7.21□□□□□ -1.26
CLDND1-228ENST00000513873 ICMTO60725 284 aa7.21□□□□□ -1.26
CLDND1-228ENST00000513873 SIN3BO75182 1162 aa7.21□□□□□ -1.26
CLDND1-228ENST00000513873 EIF1AXP47813 144 aaKnown RBP7.21□□□□□ -1.26
CLDND1-228ENST00000513873 DNM1Q05193 864 aaKnown RBP7.21□□□□□ -1.26
CLDND1-228ENST00000513873 TBC1D8BQ0IIM8 1120 aa7.21□□□□□ -1.26
CLDND1-228ENST00000513873 PCSK7Q16549 785 aa7.21□□□□□ -1.26
CLDND1-228ENST00000513873 KRT25Q7Z3Z0 450 aa7.21□□□□□ -1.26
CLDND1-228ENST00000513873 TXNDC2Q86VQ3 553 aa7.21□□□□□ -1.26
CLDND1-228ENST00000513873 HOMEZQ8IX15 550 aa7.21□□□□□ -1.26
CLDND1-228ENST00000513873 USP20Q9Y2K6 914 aa7.21□□□□□ -1.26
CLDND1-228ENST00000513873 AQRO60306 1485 aaKnown RBP eCLIP7.21□□□□□ -1.261e-6■■■■□ 26.1
CLDND1-228ENST00000513873 SYNJ1O43426 1573 aa7.2□□□□□ -1.26
CLDND1-228ENST00000513873 ABCC8Q09428 1581 aa7.2□□□□□ -1.26
CLDND1-228ENST00000513873 ZBTB39O15060 712 aa7.2□□□□□ -1.26
CLDND1-228ENST00000513873 SASH3O75995 380 aa7.2□□□□□ -1.26
CLDND1-228ENST00000513873 NFKB1P19838 968 aa7.2□□□□□ -1.26
CLDND1-228ENST00000513873 USP5P45974 858 aa7.2□□□□□ -1.26
CLDND1-228ENST00000513873 RAB44Q7Z6P3 723 aaPredicted RBP7.2□□□□□ -1.26
CLDND1-228ENST00000513873 UBE2OQ9C0C9 1292 aaKnown RBP7.2□□□□□ -1.26
CLDND1-228ENST00000513873 BIN2Q9UBW5 565 aaPredicted RBP7.2□□□□□ -1.26
CLDND1-228ENST00000513873 GNEQ9Y223 722 aaKnown RBP7.2□□□□□ -1.26
CLDND1-228ENST00000513873 GAPVD1Q14C86 1478 aa7.19□□□□□ -1.26
CLDND1-228ENST00000513873 TOPBP1Q92547 1522 aa7.19□□□□□ -1.26
CLDND1-228ENST00000513873 RARAP10276 462 aa7.19□□□□□ -1.26
CLDND1-228ENST00000513873 NPR3P17342 541 aa7.19□□□□□ -1.26
CLDND1-228ENST00000513873 MZF1P28698 734 aaPredicted RBP7.19□□□□□ -1.26
CLDND1-228ENST00000513873 C8orf34Q49A92 452 aa7.19□□□□□ -1.26
CLDND1-228ENST00000513873 TTC39BQ5VTQ0 682 aaPredicted RBP7.19□□□□□ -1.26
CLDND1-228ENST00000513873 ATCAYQ86WG3 371 aa7.19□□□□□ -1.26
CLDND1-228ENST00000513873 EDEM1Q92611 657 aa7.19□□□□□ -1.26
CLDND1-228ENST00000513873 NUDT16Q96DE0 195 aaKnown RBP7.19□□□□□ -1.26
CLDND1-228ENST00000513873 BRPF3Q9ULD4 1205 aa7.19□□□□□ -1.26
CLDND1-228ENST00000513873 TARBP1Q13395 1621 aaKnown RBP7.19□□□□□ -1.26
CLDND1-228ENST00000513873 NDUFB5O43674 189 aa7.18□□□□□ -1.26
CLDND1-228ENST00000513873 EGFRP00533 1210 aa7.18□□□□□ -1.26
CLDND1-228ENST00000513873 NLRP13Q86W25 1043 aa7.18□□□□□ -1.26
CLDND1-228ENST00000513873 TRIM11Q96F44 468 aa7.18□□□□□ -1.26
CLDND1-228ENST00000513873 IVNS1ABPQ9Y6Y0 642 aa7.18□□□□□ -1.26
CLDND1-228ENST00000513873 WIZO95785 1651 aa7.18□□□□□ -1.26
CLDND1-228ENST00000513873 ELOA3CA0A087WX78 387 aaPredicted RBP7.17□□□□□ -1.26
CLDND1-228ENST00000513873 ELOA3DA6NLF2 546 aaPredicted RBP7.17□□□□□ -1.26
CLDND1-228ENST00000513873 MAP3K6O95382 1288 aa7.17□□□□□ -1.26
CLDND1-228ENST00000513873 PSAPP07602 524 aa7.17□□□□□ -1.26
CLDND1-228ENST00000513873 H2AFB1P0C5Y9 115 aa7.17□□□□□ -1.26
CLDND1-228ENST00000513873 H2AFB2P0C5Z0 115 aa7.17□□□□□ -1.26
CLDND1-228ENST00000513873 TARSP26639 723 aaKnown RBP7.17□□□□□ -1.26
CLDND1-228ENST00000513873 EHHADHQ08426 723 aa7.17□□□□□ -1.26
CLDND1-228ENST00000513873 ELOA3BQ3SY89 546 aa7.17□□□□□ -1.26
CLDND1-228ENST00000513873 FAM26DQ5JW98 314 aa7.17□□□□□ -1.26
CLDND1-228ENST00000513873 ELOA3Q8NG57 546 aa7.17□□□□□ -1.26
CLDND1-228ENST00000513873 HCN2Q9UL51 889 aa7.17□□□□□ -1.26
CLDND1-228ENST00000513873 KCNMB2Q9Y691 235 aa7.17□□□□□ -1.26
CLDND1-228ENST00000513873 TOP2AP11388 1531 aaKnown RBP7.17□□□□□ -1.26
CLDND1-228ENST00000513873 SOWAHDA6NJG2 315 aa7.16□□□□□ -1.26
CLDND1-228ENST00000513873 PDGFAP04085 211 aa7.16□□□□□ -1.26
CLDND1-228ENST00000513873 PDE12Q6L8Q7 609 aaKnown RBP7.16□□□□□ -1.26
CLDND1-228ENST00000513873 ZNF438Q7Z4V0 828 aa7.16□□□□□ -1.26
CLDND1-228ENST00000513873 TMC1Q8TDI8 760 aa7.16□□□□□ -1.26
CLDND1-228ENST00000513873 TNFRSF25Q93038 417 aa7.16□□□□□ -1.26
CLDND1-228ENST00000513873 POLIQ9UNA4 740 aa7.16□□□□□ -1.26
CLDND1-228ENST00000513873 ADARB2-AS1A8MUL3 147 aa7.15□□□□□ -1.26
CLDND1-228ENST00000513873 ELNP15502 786 aa7.15□□□□□ -1.26
CLDND1-228ENST00000513873 ADH7P40394 386 aa7.15□□□□□ -1.26
CLDND1-228ENST00000513873 DHX32Q7L7V1 743 aaKnown RBP7.15□□□□□ -1.26
CLDND1-228ENST00000513873 FCHSD1Q86WN1 690 aa7.15□□□□□ -1.26
CLDND1-228ENST00000513873 RBSNQ9H1K0 784 aa7.15□□□□□ -1.26
CLDND1-228ENST00000513873 KLF15Q9UIH9 416 aa7.15□□□□□ -1.26
CLDND1-228ENST00000513873 LMTK3Q96Q04 1460 aa7.15□□□□□ -1.27
CLDND1-228ENST00000513873 NEFLP07196 543 aa7.14□□□□□ -1.27
CLDND1-228ENST00000513873 GRNP28799 593 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms