RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 EIF2AK2P19525 551 aaKnown RBP11.22□□□□□ -0.61
TRAPPC11-210ENST00000513600 COL8A1P27658 744 aa11.22□□□□□ -0.61
TRAPPC11-210ENST00000513600 EHHADHQ08426 723 aa11.22□□□□□ -0.61
TRAPPC11-210ENST00000513600 NSUN5Q96P11 429 aaKnown RBP11.22□□□□□ -0.61
TRAPPC11-210ENST00000513600 LPIN3Q9BQK8 851 aa11.22□□□□□ -0.61
TRAPPC11-210ENST00000513600 RBSNQ9H1K0 784 aa11.22□□□□□ -0.61
TRAPPC11-210ENST00000513600 TMEM63CQ9P1W3 806 aa11.22□□□□□ -0.61
TRAPPC11-210ENST00000513600 GNEQ9Y223 722 aaKnown RBP11.22□□□□□ -0.61
TRAPPC11-210ENST00000513600 GHRHP01286 108 aa11.21□□□□□ -0.61
TRAPPC11-210ENST00000513600 HYAL2Q12891 473 aa11.21□□□□□ -0.61
TRAPPC11-210ENST00000513600 J3QW42 95 aa11.2□□□□□ -0.62
TRAPPC11-210ENST00000513600 AFF1P51825 1210 aaKnown RBP11.2□□□□□ -0.62
TRAPPC11-210ENST00000513600 CCDC87Q9NVE4 849 aa11.2□□□□□ -0.62
TRAPPC11-210ENST00000513600 ECM1Q16610 540 aa11.19□□□□□ -0.62
TRAPPC11-210ENST00000513600 TRAIPQ9BWF2 469 aa11.19□□□□□ -0.62
TRAPPC11-210ENST00000513600 SMG9Q9H0W8 520 aaKnown RBP11.19□□□□□ -0.62
TRAPPC11-210ENST00000513600 PRRT3Q5FWE3 981 aa11.18□□□□□ -0.62
TRAPPC11-210ENST00000513600 GJD3Q8N144 294 aa11.18□□□□□ -0.62
TRAPPC11-210ENST00000513600 PMEPA1Q969W9 287 aa11.18□□□□□ -0.62
TRAPPC11-210ENST00000513600 PLD4Q96BZ4 506 aa11.18□□□□□ -0.62
TRAPPC11-210ENST00000513600 SPACA7Q96KW9 195 aa11.18□□□□□ -0.62
TRAPPC11-210ENST00000513600 BRPF3Q9ULD4 1205 aa11.18□□□□□ -0.62
TRAPPC11-210ENST00000513600 A6NHS1 94 aa11.17□□□□□ -0.62
TRAPPC11-210ENST00000513600 ARHGAP4P98171 946 aa11.17□□□□□ -0.62
TRAPPC11-210ENST00000513600 TRAPPC3LQ5T215 181 aa11.17□□□□□ -0.62
TRAPPC11-210ENST00000513600 KCTD17Q8N5Z5 321 aa11.17□□□□□ -0.62
TRAPPC11-210ENST00000513600 KIF4AO95239 1232 aa11.16□□□□□ -0.62
TRAPPC11-210ENST00000513600 SPATA31C1P0DKV0 1188 aa11.16□□□□□ -0.62
TRAPPC11-210ENST00000513600 KCNA1Q09470 495 aa11.16□□□□□ -0.62
TRAPPC11-210ENST00000513600 TRIM28Q13263 835 aaKnown RBP11.16□□□□□ -0.62
TRAPPC11-210ENST00000513600 GRIK5Q16478 980 aa11.16□□□□□ -0.62
TRAPPC11-210ENST00000513600 COL13A1Q5TAT6 717 aaPredicted RBP11.16□□□□□ -0.62
TRAPPC11-210ENST00000513600 CNTN3Q9P232 1028 aa11.16□□□□□ -0.62
TRAPPC11-210ENST00000513600 KRBA1A5PL33 1030 aa11.15□□□□□ -0.62
TRAPPC11-210ENST00000513600 SOWAHDA6NJG2 315 aa11.15□□□□□ -0.62
TRAPPC11-210ENST00000513600 NDUFB5O43674 189 aa11.15□□□□□ -0.62
TRAPPC11-210ENST00000513600 CYP2E1P05181 493 aaPredicted RBP11.15□□□□□ -0.62
TRAPPC11-210ENST00000513600 CES1P23141 567 aa11.15□□□□□ -0.62
TRAPPC11-210ENST00000513600 MSL1Q68DK7 614 aa11.15□□□□□ -0.62
TRAPPC11-210ENST00000513600 NCAPG2Q86XI2 1143 aa11.14□□□□□ -0.63
TRAPPC11-210ENST00000513600 C1orf127Q8N9H9 656 aa11.14□□□□□ -0.63
TRAPPC11-210ENST00000513600 TNFRSF21O75509 655 aa11.13□□□□□ -0.63
TRAPPC11-210ENST00000513600 ILDR2Q71H61 639 aa11.13□□□□□ -0.63
TRAPPC11-210ENST00000513600 WFDC8Q8IUA0 241 aa11.13□□□□□ -0.63
TRAPPC11-210ENST00000513600 SNX29Q8TEQ0 813 aa11.13□□□□□ -0.63
TRAPPC11-210ENST00000513600 CITED4Q96RK1 184 aa11.13□□□□□ -0.63
TRAPPC11-210ENST00000513600 PATL2C9JE40 543 aaKnown RBP11.12□□□□□ -0.63
TRAPPC11-210ENST00000513600 PHACTR2O75167 634 aa11.12□□□□□ -0.63
TRAPPC11-210ENST00000513600 RAC1P63000 192 aa11.12□□□□□ -0.63
TRAPPC11-210ENST00000513600 PLA2G4EQ3MJ16 856 aa11.12□□□□□ -0.63
TRAPPC11-210ENST00000513600 DMRTC2Q8IXT2 367 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC11-210ENST00000513600 CACTIN-AS1Q8N1I8 211 aa11.12□□□□□ -0.63
TRAPPC11-210ENST00000513600 CHRDQ9H2X0 955 aa11.12□□□□□ -0.63
TRAPPC11-210ENST00000513600 SALL4Q9UJQ4 1053 aa11.12□□□□□ -0.63
TRAPPC11-210ENST00000513600 A0A0A0MRY4 1105 aa11.11□□□□□ -0.63
TRAPPC11-210ENST00000513600 IGHA1P01876 353 aa11.11□□□□□ -0.63
TRAPPC11-210ENST00000513600 PDE3BQ13370 1112 aa11.11□□□□□ -0.63
TRAPPC11-210ENST00000513600 CEP120Q8N960 986 aa11.11□□□□□ -0.63
TRAPPC11-210ENST00000513600 KANSL3Q9P2N6 904 aa11.11□□□□□ -0.63
TRAPPC11-210ENST00000513600 SMNDC1O75940 238 aaKnown RBP eCLIP11.1□□□□□ -0.63
TRAPPC11-210ENST00000513600 DTWD1Q8N5C7 304 aa11.1□□□□□ -0.63
TRAPPC11-210ENST00000513600 FAM229AH3BQW9 127 aa11.09□□□□□ -0.63
TRAPPC11-210ENST00000513600 ATP11AP98196 1134 aa11.09□□□□□ -0.63
TRAPPC11-210ENST00000513600 GDF6Q6KF10 455 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC11-210ENST00000513600 PBX4Q9BYU1 374 aa11.09□□□□□ -0.63
TRAPPC11-210ENST00000513600 RASSF4Q9H2L5 321 aa11.09□□□□□ -0.63
TRAPPC11-210ENST00000513600 FOXD3Q9UJU5 478 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC11-210ENST00000513600 IVNS1ABPQ9Y6Y0 642 aa11.09□□□□□ -0.63
TRAPPC11-210ENST00000513600 APBA3O96018 575 aa11.08□□□□□ -0.64
TRAPPC11-210ENST00000513600 NEFLP07196 543 aa11.08□□□□□ -0.64
TRAPPC11-210ENST00000513600 CEP135Q66GS9 1140 aa11.08□□□□□ -0.64
TRAPPC11-210ENST00000513600 GPAT2Q6NUI2 795 aa11.08□□□□□ -0.64
TRAPPC11-210ENST00000513600 NACC1Q96RE7 527 aa11.08□□□□□ -0.64
TRAPPC11-210ENST00000513600 BIN2Q9UBW5 565 aaPredicted RBP11.08□□□□□ -0.64
TRAPPC11-210ENST00000513600 TRIM33Q9UPN9 1127 aa11.08□□□□□ -0.64
TRAPPC11-210ENST00000513600 PDIA4P13667 645 aaKnown RBP11.07□□□□□ -0.64
TRAPPC11-210ENST00000513600 ELNP15502 786 aa11.07□□□□□ -0.64
TRAPPC11-210ENST00000513600 BAG6P46379 1132 aa11.07□□□□□ -0.64
TRAPPC11-210ENST00000513600 FMR1NBQ8N0W7 255 aaPredicted RBP11.07□□□□□ -0.64
TRAPPC11-210ENST00000513600 IL22RA1Q8N6P7 574 aa11.07□□□□□ -0.64
TRAPPC11-210ENST00000513600 FAM129BQ96TA1 746 aa11.07□□□□□ -0.64
TRAPPC11-210ENST00000513600 ZFYVE28Q9HCC9 887 aa11.07□□□□□ -0.64
TRAPPC11-210ENST00000513600 EREGO14944 169 aa11.06□□□□□ -0.64
TRAPPC11-210ENST00000513600 ITGB2P05107 769 aa11.06□□□□□ -0.64
TRAPPC11-210ENST00000513600 MUC3BQ9H195 1237 aa11.06□□□□□ -0.64
TRAPPC11-210ENST00000513600 AMOTL2Q9Y2J4 779 aa11.06□□□□□ -0.64
TRAPPC11-210ENST00000513600 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.06□□□□□ -0.64
TRAPPC11-210ENST00000513600 C1QTNF9BB2RNN3 333 aa11.05□□□□□ -0.64
TRAPPC11-210ENST00000513600 MSTNO14793 375 aa11.05□□□□□ -0.64
TRAPPC11-210ENST00000513600 EDN3P14138 238 aa11.05□□□□□ -0.64
TRAPPC11-210ENST00000513600 CD163Q86VB7 1156 aa11.05□□□□□ -0.64
TRAPPC11-210ENST00000513600 FBXO11Q86XK2 927 aa11.05□□□□□ -0.64
TRAPPC11-210ENST00000513600 TMC1Q8TDI8 760 aa11.05□□□□□ -0.64
TRAPPC11-210ENST00000513600 RBCK1Q9BYM8 510 aa11.05□□□□□ -0.64
TRAPPC11-210ENST00000513600 GRIK4Q16099 956 aa11.04□□□□□ -0.64
TRAPPC11-210ENST00000513600 FAM177BA6PVY3 158 aa11.03□□□□□ -0.64
TRAPPC11-210ENST00000513600 C9orf172C9J069 976 aa11.03□□□□□ -0.64
TRAPPC11-210ENST00000513600 CHRNA4P43681 627 aa11.03□□□□□ -0.64
TRAPPC11-210ENST00000513600 DMRTB1Q96MA1 342 aa11.03□□□□□ -0.64
TRAPPC11-210ENST00000513600 SRA1Q9HD15 236 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms