RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 SBNO2Q9Y2G9 1366 aa6.93□□□□□ -1.3
HTT-211ENST00000513326 N4BP2Q86UW6 1770 aaPredicted RBP6.92□□□□□ -1.3
HTT-211ENST00000513326 UBR3Q6ZT12 1888 aa6.92□□□□□ -1.3
HTT-211ENST00000513326 RPIAP49247 311 aa6.92□□□□□ -1.3
HTT-211ENST00000513326 TRIM32Q13049 653 aa6.92□□□□□ -1.3
HTT-211ENST00000513326 ERFEQ4G0M1 354 aa6.92□□□□□ -1.3
HTT-211ENST00000513326 TTC21AQ8NDW8 1320 aa6.92□□□□□ -1.3
HTT-211ENST00000513326 C4BP0C0L5 1744 aa6.92□□□□□ -1.3
HTT-211ENST00000513326 USP31Q70CQ4 1352 aa6.92□□□□□ -1.3
HTT-211ENST00000513326 KTN1Q86UP2 1357 aaKnown RBP6.92□□□□□ -1.3
HTT-211ENST00000513326 KCPQ6ZWJ8 1503 aa6.91□□□□□ -1.3
HTT-211ENST00000513326 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.91□□□□□ -1.3
HTT-211ENST00000513326 PIK3CDO00329 1044 aa6.91□□□□□ -1.3
HTT-211ENST00000513326 PDIA4P13667 645 aaKnown RBP6.91□□□□□ -1.3
HTT-211ENST00000513326 WNT7BP56706 349 aa6.91□□□□□ -1.3
HTT-211ENST00000513326 C4orf48Q5BLP8 95 aa6.91□□□□□ -1.3
HTT-211ENST00000513326 PLA2G2CQ5R387 149 aa6.91□□□□□ -1.3
HTT-211ENST00000513326 PHTF2Q8N3S3 785 aa6.91□□□□□ -1.3
HTT-211ENST00000513326 SLC10A4Q96EP9 437 aa6.91□□□□□ -1.3
HTT-211ENST00000513326 C1QTNF2Q9BXJ5 285 aa6.91□□□□□ -1.3
HTT-211ENST00000513326 CD2BP2O95400 341 aaKnown RBP6.9□□□□□ -1.3
HTT-211ENST00000513326 HSPA1AP0DMV8 641 aaKnown RBP6.9□□□□□ -1.3
HTT-211ENST00000513326 HSPA1BP0DMV9 641 aaKnown RBP6.9□□□□□ -1.3
HTT-211ENST00000513326 SKIP12755 728 aa6.9□□□□□ -1.3
HTT-211ENST00000513326 RNF135Q8IUD6 432 aa6.9□□□□□ -1.3
HTT-211ENST00000513326 PLEKHM2Q8IWE5 1019 aa6.9□□□□□ -1.3
HTT-211ENST00000513326 TRMT44Q8IYL2 757 aaKnown RBP6.9□□□□□ -1.3
HTT-211ENST00000513326 USHBP1Q8N6Y0 703 aa6.9□□□□□ -1.3
HTT-211ENST00000513326 CDV3Q9UKY7 258 aaKnown RBP6.9□□□□□ -1.3
HTT-211ENST00000513326 PALLDQ8WX93 1383 aa6.9□□□□□ -1.31
HTT-211ENST00000513326 USP47Q96K76 1375 aa6.9□□□□□ -1.31
HTT-211ENST00000513326 A0A0G2JLW4 131 aa6.89□□□□□ -1.31
HTT-211ENST00000513326 LZTS3O60299 673 aaPredicted RBP6.89□□□□□ -1.31
HTT-211ENST00000513326 VARSP26640 1264 aaKnown RBP6.89□□□□□ -1.31
HTT-211ENST00000513326 PDE4CQ08493 712 aa6.89□□□□□ -1.31
HTT-211ENST00000513326 NBPF20Q3BBV1 942 aa6.89□□□□□ -1.31
HTT-211ENST00000513326 MAP7D1Q3KQU3 841 aa6.89□□□□□ -1.31
HTT-211ENST00000513326 C9orf131Q5VYM1 1079 aa6.89□□□□□ -1.31
HTT-211ENST00000513326 LINC00116Q8NCU8 138 aa6.89□□□□□ -1.31
HTT-211ENST00000513326 ZCRB1Q8TBF4 217 aaKnown RBP6.89□□□□□ -1.31
HTT-211ENST00000513326 FAM174AQ8TBP5 190 aa6.89□□□□□ -1.31
HTT-211ENST00000513326 VRTNQ9H8Y1 702 aa6.89□□□□□ -1.31
HTT-211ENST00000513326 BCS1LQ9Y276 419 aa6.89□□□□□ -1.31
HTT-211ENST00000513326 EVC2Q86UK5 1308 aa6.89□□□□□ -1.31
HTT-211ENST00000513326 PKD1L3Q7Z443 1732 aa6.89□□□□□ -1.31
HTT-211ENST00000513326 KIF13BQ9NQT8 1826 aa6.89□□□□□ -1.31
HTT-211ENST00000513326 BRCA1P38398 1863 aaKnown RBP6.88□□□□□ -1.31
HTT-211ENST00000513326 MAP2P11137 1827 aaKnown RBP6.88□□□□□ -1.31
HTT-211ENST00000513326 C10orf71Q711Q0 1435 aa6.88□□□□□ -1.31
HTT-211ENST00000513326 USP17L3A6NCW0 530 aa6.88□□□□□ -1.31
HTT-211ENST00000513326 USP17L4A6NCW7 530 aa6.88□□□□□ -1.31
HTT-211ENST00000513326 USP17L5A8MUK1 530 aa6.88□□□□□ -1.31
HTT-211ENST00000513326 MMP10P09238 476 aa6.88□□□□□ -1.31
HTT-211ENST00000513326 RNF20Q5VTR2 975 aa6.88□□□□□ -1.31
HTT-211ENST00000513326 USP17L2Q6R6M4 530 aa6.88□□□□□ -1.31
HTT-211ENST00000513326 ARHGAP27Q6ZUM4 889 aa6.88□□□□□ -1.31
HTT-211ENST00000513326 USP17L1Q7RTZ2 530 aa6.88□□□□□ -1.31
HTT-211ENST00000513326 PLPP7Q8NBV4 271 aa6.88□□□□□ -1.31
HTT-211ENST00000513326 RETREG2Q8NC44 543 aa6.88□□□□□ -1.31
HTT-211ENST00000513326 IP6K1Q92551 441 aa6.88□□□□□ -1.31
HTT-211ENST00000513326 MAP3K19Q56UN5 1328 aa6.87□□□□□ -1.31
HTT-211ENST00000513326 DPEP1P16444 411 aa6.87□□□□□ -1.31
HTT-211ENST00000513326 SKOR1P84550 965 aa6.87□□□□□ -1.31
HTT-211ENST00000513326 ITPK1Q13572 414 aa6.87□□□□□ -1.31
HTT-211ENST00000513326 MPRIPQ6WCQ1 1025 aa6.87□□□□□ -1.31
HTT-211ENST00000513326 RRAGCQ9HB90 399 aa6.87□□□□□ -1.31
HTT-211ENST00000513326 ITGB4P16144 1822 aa6.87□□□□□ -1.31
HTT-211ENST00000513326 A0A1W2PP64 1363 aa6.86□□□□□ -1.31
HTT-211ENST00000513326 ATG7O95352 703 aa6.86□□□□□ -1.31
HTT-211ENST00000513326 KCNA3P22001 575 aa6.86□□□□□ -1.31
HTT-211ENST00000513326 HOXC9P31274 260 aa6.86□□□□□ -1.31
HTT-211ENST00000513326 FSTL1Q12841 308 aa6.86□□□□□ -1.31
HTT-211ENST00000513326 NBPF6Q5VWK0 638 aa6.86□□□□□ -1.31
HTT-211ENST00000513326 LIAT1Q6ZQX7 453 aa6.86□□□□□ -1.31
HTT-211ENST00000513326 DEPDC4Q8N2C3 294 aa6.86□□□□□ -1.31
HTT-211ENST00000513326 EHBP1Q8NDI1 1231 aa6.86□□□□□ -1.31
HTT-211ENST00000513326 NBPF4Q96M43 638 aa6.86□□□□□ -1.31
HTT-211ENST00000513326 TRAIPQ9BWF2 469 aa6.86□□□□□ -1.31
HTT-211ENST00000513326 ESPNB1AK53 854 aa6.85□□□□□ -1.31
HTT-211ENST00000513326 CYP27B1O15528 508 aa6.85□□□□□ -1.31
HTT-211ENST00000513326 NCOA4Q13772 614 aa6.85□□□□□ -1.31
HTT-211ENST00000513326 EML3Q32P44 896 aa6.85□□□□□ -1.31
HTT-211ENST00000513326 CDCA8Q53HL2 280 aa6.85□□□□□ -1.31
HTT-211ENST00000513326 RC3H1Q5TC82 1133 aaKnown RBP6.85□□□□□ -1.31
HTT-211ENST00000513326 TRAF7Q6Q0C0 670 aa6.85□□□□□ -1.31
HTT-211ENST00000513326 C16orf71Q8IYS4 520 aaPredicted RBP6.85□□□□□ -1.31
HTT-211ENST00000513326 FLAD1Q8NFF5 587 aa6.85□□□□□ -1.31
HTT-211ENST00000513326 SLC12A5Q9H2X9 1139 aa6.85□□□□□ -1.31
HTT-211ENST00000513326 DOLKQ9UPQ8 538 aa6.85□□□□□ -1.31
HTT-211ENST00000513326 MAP4K5Q9Y4K4 846 aa6.85□□□□□ -1.31
HTT-211ENST00000513326 NSD3Q9BZ95 1437 aa6.84□□□□□ -1.31
HTT-211ENST00000513326 TNRC6CQ9HCJ0 1690 aaKnown RBP6.84□□□□□ -1.31
HTT-211ENST00000513326 ATP5J2-PTCD1G3V325 749 aa6.84□□□□□ -1.31
HTT-211ENST00000513326 SLC19A1P41440 591 aa6.84□□□□□ -1.31
HTT-211ENST00000513326 RASSF7Q02833 373 aa6.84□□□□□ -1.31
HTT-211ENST00000513326 RRS1Q15050 365 aaKnown RBP6.84□□□□□ -1.31
HTT-211ENST00000513326 PIGBQ92521 554 aa6.84□□□□□ -1.31
HTT-211ENST00000513326 KCTD15Q96SI1 283 aaPredicted RBP6.84□□□□□ -1.31
HTT-211ENST00000513326 RNF181Q9P0P0 153 aa6.84□□□□□ -1.31
HTT-211ENST00000513326 MKRN1Q9UHC7 482 aaKnown RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms