RNA–Protein interactions for RNA: ENST00000513064.1

CHD1-210, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-210ENST00000513064 CNTNAP5Q8WYK1 1306 aa8.36□□□□□ -1.07
CHD1-210ENST00000513064 J3QW42 95 aa8.36□□□□□ -1.07
CHD1-210ENST00000513064 KIF4AO95239 1232 aa8.36□□□□□ -1.07
CHD1-210ENST00000513064 CPB1P15086 417 aa8.36□□□□□ -1.07
CHD1-210ENST00000513064 HYAL2Q12891 473 aa8.36□□□□□ -1.07
CHD1-210ENST00000513064 PERM1Q5SV97 790 aa8.36□□□□□ -1.07
CHD1-210ENST00000513064 COL13A1Q5TAT6 717 aaPredicted RBP8.36□□□□□ -1.07
CHD1-210ENST00000513064 PODNQ7Z5L7 613 aa8.36□□□□□ -1.07
CHD1-210ENST00000513064 SNX29Q8TEQ0 813 aa8.36□□□□□ -1.07
CHD1-210ENST00000513064 CHRDQ9H2X0 955 aa8.36□□□□□ -1.07
CHD1-210ENST00000513064 PHF20L1A8MW92 1017 aa8.35□□□□□ -1.07
CHD1-210ENST00000513064 LILRB5O75023 590 aa8.35□□□□□ -1.07
CHD1-210ENST00000513064 CES1P23141 567 aa8.35□□□□□ -1.07
CHD1-210ENST00000513064 COL9A3Q14050 684 aaPredicted RBP8.35□□□□□ -1.07
CHD1-210ENST00000513064 HFE2Q6ZVN8 426 aa8.35□□□□□ -1.07
CHD1-210ENST00000513064 TTC9Q92623 222 aa8.35□□□□□ -1.07
CHD1-210ENST00000513064 PMEPA1Q969W9 287 aa8.35□□□□□ -1.07
CHD1-210ENST00000513064 LPIN3Q9BQK8 851 aa8.35□□□□□ -1.07
CHD1-210ENST00000513064 GNB5O14775 395 aa8.34□□□□□ -1.07
CHD1-210ENST00000513064 RGS9O75916 674 aaPredicted RBP8.34□□□□□ -1.07
CHD1-210ENST00000513064 ELMSAN1Q6PJG2 1045 aa8.34□□□□□ -1.07
CHD1-210ENST00000513064 SND1Q7KZF4 910 aaKnown RBP eCLIP8.34□□□□□ -1.07
CHD1-210ENST00000513064 SALL4Q9UJQ4 1053 aa8.34□□□□□ -1.07
CHD1-210ENST00000513064 FOXD3Q9UJU5 478 aaPredicted RBP8.34□□□□□ -1.07
CHD1-210ENST00000513064 PIK3R2O00459 728 aa8.33□□□□□ -1.08
CHD1-210ENST00000513064 PHACTR2O75167 634 aa8.33□□□□□ -1.08
CHD1-210ENST00000513064 EIF2AK2P19525 551 aaKnown RBP8.33□□□□□ -1.08
CHD1-210ENST00000513064 AFF1P51825 1210 aaKnown RBP8.33□□□□□ -1.08
CHD1-210ENST00000513064 C8orf86Q6ZUL3 223 aa8.33□□□□□ -1.08
CHD1-210ENST00000513064 TMC7Q7Z402 723 aa8.33□□□□□ -1.08
CHD1-210ENST00000513064 CEP120Q8N960 986 aa8.33□□□□□ -1.08
CHD1-210ENST00000513064 NUDT8Q8WV74 236 aa8.33□□□□□ -1.08
CHD1-210ENST00000513064 DMRTB1Q96MA1 342 aa8.33□□□□□ -1.08
CHD1-210ENST00000513064 JPH1Q9HDC5 661 aaPredicted RBP8.33□□□□□ -1.08
CHD1-210ENST00000513064 RNF225M0QZC1 329 aaPredicted RBP8.32□□□□□ -1.08
CHD1-210ENST00000513064 GPR182O15218 404 aa8.32□□□□□ -1.08
CHD1-210ENST00000513064 GHRHP01286 108 aa8.32□□□□□ -1.08
CHD1-210ENST00000513064 NEFLP07196 543 aa8.32□□□□□ -1.08
CHD1-210ENST00000513064 NID1P14543 1247 aa8.32□□□□□ -1.08
CHD1-210ENST00000513064 NCAPG2Q86XI2 1143 aa8.32□□□□□ -1.08
CHD1-210ENST00000513064 TMC1Q8TDI8 760 aa8.32□□□□□ -1.08
CHD1-210ENST00000513064 PLD4Q96BZ4 506 aa8.32□□□□□ -1.08
CHD1-210ENST00000513064 TRIM11Q96F44 468 aa8.32□□□□□ -1.08
CHD1-210ENST00000513064 SPACA7Q96KW9 195 aa8.32□□□□□ -1.08
CHD1-210ENST00000513064 SMG9Q9H0W8 520 aaKnown RBP8.32□□□□□ -1.08
CHD1-210ENST00000513064 ZFYVE28Q9HCC9 887 aa8.32□□□□□ -1.08
CHD1-210ENST00000513064 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.32□□□□□ -1.08
CHD1-210ENST00000513064 EREGO14944 169 aa8.31□□□□□ -1.08
CHD1-210ENST00000513064 MAPK1P28482 360 aa8.31□□□□□ -1.08
CHD1-210ENST00000513064 KCNMA1Q12791 1236 aa8.31□□□□□ -1.08
CHD1-210ENST00000513064 GRIK5Q16478 980 aa8.31□□□□□ -1.08
CHD1-210ENST00000513064 ILDR2Q71H61 639 aa8.31□□□□□ -1.08
CHD1-210ENST00000513064 ALKBH8Q96BT7 664 aaKnown RBP8.31□□□□□ -1.08
CHD1-210ENST00000513064 RBSNQ9H1K0 784 aa8.31□□□□□ -1.08
CHD1-210ENST00000513064 KANSL3Q9P2N6 904 aa8.31□□□□□ -1.08
CHD1-210ENST00000513064 IRS1P35568 1242 aa8.3□□□□□ -1.08
CHD1-210ENST00000513064 GSK3AP49840 483 aa8.3□□□□□ -1.08
CHD1-210ENST00000513064 NIF3L1Q9GZT8 377 aa8.3□□□□□ -1.08
CHD1-210ENST00000513064 ASB16Q96NS5 453 aa8.29□□□□□ -1.08
CHD1-210ENST00000513064 PLVAPQ9BX97 442 aa8.29□□□□□ -1.08
CHD1-210ENST00000513064 PBX4Q9BYU1 374 aa8.29□□□□□ -1.08
CHD1-210ENST00000513064 SUV39H2Q9H5I1 410 aa8.29□□□□□ -1.08
CHD1-210ENST00000513064 NOP53Q9NZM5 478 aaKnown RBP8.29□□□□□ -1.08
CHD1-210ENST00000513064 AMOTL2Q9Y2J4 779 aa8.29□□□□□ -1.08
CHD1-210ENST00000513064 TREHO43280 583 aa8.28□□□□□ -1.08
CHD1-210ENST00000513064 EDN3P14138 238 aa8.28□□□□□ -1.08
CHD1-210ENST00000513064 ATP11AP98196 1134 aa8.28□□□□□ -1.08
CHD1-210ENST00000513064 ORC1Q13415 861 aa8.28□□□□□ -1.08
CHD1-210ENST00000513064 DSC3Q14574 896 aa8.28□□□□□ -1.08
CHD1-210ENST00000513064 ZSCAN29Q8IWY8 852 aaPredicted RBP8.28□□□□□ -1.08
CHD1-210ENST00000513064 GZF1Q9H116 711 aaPredicted RBP8.28□□□□□ -1.08
CHD1-210ENST00000513064 DNAJC25Q9H1X3 360 aa8.28□□□□□ -1.08
CHD1-210ENST00000513064 RASSF4Q9H2L5 321 aa8.28□□□□□ -1.08
CHD1-210ENST00000513064 DZANK1Q9NVP4 752 aa8.28□□□□□ -1.08
CHD1-210ENST00000513064 NFKBIEO00221 500 aa8.27□□□□□ -1.09
CHD1-210ENST00000513064 COL8A1P27658 744 aa8.27□□□□□ -1.09
CHD1-210ENST00000513064 SPDYE3A6NKU9 549 aa8.26□□□□□ -1.09
CHD1-210ENST00000513064 EIF1AYO14602 144 aaKnown RBP8.26□□□□□ -1.09
CHD1-210ENST00000513064 CPNE3O75131 537 aaKnown RBP8.26□□□□□ -1.09
CHD1-210ENST00000513064 SMNDC1O75940 238 aaKnown RBP eCLIP8.26□□□□□ -1.09
CHD1-210ENST00000513064 BAG6P46379 1132 aa8.26□□□□□ -1.09
CHD1-210ENST00000513064 PLCB3Q01970 1234 aa8.26□□□□□ -1.09
CHD1-210ENST00000513064 RASSF7Q02833 373 aa8.26□□□□□ -1.09
CHD1-210ENST00000513064 PEAR1Q5VY43 1037 aaPredicted RBP8.26□□□□□ -1.09
CHD1-210ENST00000513064 MSL1Q68DK7 614 aa8.26□□□□□ -1.09
CHD1-210ENST00000513064 ALYREFQ86V81 257 aaKnown RBP8.26□□□□□ -1.09
CHD1-210ENST00000513064 GALNT12Q8IXK2 581 aa8.26□□□□□ -1.09
CHD1-210ENST00000513064 CACTIN-AS1Q8N1I8 211 aa8.26□□□□□ -1.09
CHD1-210ENST00000513064 POP1Q99575 1024 aaKnown RBP8.26□□□□□ -1.09
CHD1-210ENST00000513064 TRIM33Q9UPN9 1127 aa8.26□□□□□ -1.09
CHD1-210ENST00000513064 POLR3DP05423 398 aaPredicted RBP8.25□□□□□ -1.09
CHD1-210ENST00000513064 ACPPP15309 386 aa8.25□□□□□ -1.09
CHD1-210ENST00000513064 USPL1Q5W0Q7 1092 aa8.25□□□□□ -1.09
CHD1-210ENST00000513064 CEP135Q66GS9 1140 aa8.25□□□□□ -1.09
CHD1-210ENST00000513064 CSRNP1Q96S65 589 aa8.25□□□□□ -1.09
CHD1-210ENST00000513064 TRAPPC3LQ5T215 181 aa8.24□□□□□ -1.09
CHD1-210ENST00000513064 GDF6Q6KF10 455 aaPredicted RBP8.24□□□□□ -1.09
CHD1-210ENST00000513064 WFDC8Q8IUA0 241 aa8.24□□□□□ -1.09
CHD1-210ENST00000513064 OSMRQ99650 979 aa8.24□□□□□ -1.09
CHD1-210ENST00000513064 ZKSCAN3Q9BRR0 538 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms