RNA–Protein interactions for RNA: ENST00000512925.1

PFDN1-205, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 900 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-205ENST00000512925 TMC4Q7Z404 712 aa13.71□□□□□ -0.21
PFDN1-205ENST00000512925 DCPSQ96C86 337 aaKnown RBP13.71□□□□□ -0.21
PFDN1-205ENST00000512925 RTN4Q9NQC3 1192 aaKnown RBP13.71□□□□□ -0.21
PFDN1-205ENST00000512925 POLLQ9UGP5 575 aa13.71□□□□□ -0.21
PFDN1-205ENST00000512925 TRMT112Q9UI30 125 aaKnown RBP13.71□□□□□ -0.21
PFDN1-205ENST00000512925 LAMB2P55268 1798 aa13.71□□□□□ -0.22
PFDN1-205ENST00000512925 ASTN2O75129 1339 aaPredicted RBP13.7□□□□□ -0.22
PFDN1-205ENST00000512925 SH3TC1Q8TE82 1336 aa13.7□□□□□ -0.22
PFDN1-205ENST00000512925 RIMBP2O15034 1052 aa13.7□□□□□ -0.22
PFDN1-205ENST00000512925 RPS12P25398 132 aaKnown RBP13.7□□□□□ -0.22
PFDN1-205ENST00000512925 TCIRG1Q13488 830 aa13.7□□□□□ -0.22
PFDN1-205ENST00000512925 HSP90AB3PQ58FF7 597 aa13.7□□□□□ -0.22
PFDN1-205ENST00000512925 CELF1Q92879 486 aaKnown RBP13.7□□□□□ -0.22
PFDN1-205ENST00000512925 NSFL1CQ9UNZ2 370 aaKnown RBP13.7□□□□□ -0.22
PFDN1-205ENST00000512925 HPS5Q9UPZ3 1129 aa13.7□□□□□ -0.22
PFDN1-205ENST00000512925 ANKRD36CQ5JPF3 1778 aa13.7□□□□□ -0.22
PFDN1-205ENST00000512925 ECE2O60344 883 aa13.69□□□□□ -0.22
PFDN1-205ENST00000512925 GPSM2P81274 684 aa13.69□□□□□ -0.22
PFDN1-205ENST00000512925 RASAL3Q86YV0 1011 aa13.69□□□□□ -0.22
PFDN1-205ENST00000512925 XAGE3Q8WTP9 111 aa13.69□□□□□ -0.22
PFDN1-205ENST00000512925 DLG5Q8TDM6 1919 aa13.68□□□□□ -0.22
PFDN1-205ENST00000512925 TAF1P21675 1872 aa13.68□□□□□ -0.22
PFDN1-205ENST00000512925 LRRC37AA6NMS7 1700 aa13.68□□□□□ -0.22
PFDN1-205ENST00000512925 VIL1P09327 827 aaKnown RBP13.68□□□□□ -0.22
PFDN1-205ENST00000512925 AIMP1Q12904 312 aaKnown RBP13.68□□□□□ -0.22
PFDN1-205ENST00000512925 SF3B3Q15393 1217 aaKnown RBP13.68□□□□□ -0.22
PFDN1-205ENST00000512925 DOK7Q18PE1 504 aa13.68□□□□□ -0.22
PFDN1-205ENST00000512925 KIF4BQ2VIQ3 1234 aa13.68□□□□□ -0.22
PFDN1-205ENST00000512925 ZNF428Q96B54 188 aa13.68□□□□□ -0.22
PFDN1-205ENST00000512925 CDCA5Q96FF9 252 aa13.68□□□□□ -0.22
PFDN1-205ENST00000512925 GGA3Q9NZ52 723 aa13.68□□□□□ -0.22
PFDN1-205ENST00000512925 TSPYL4Q9UJ04 414 aa13.68□□□□□ -0.22
PFDN1-205ENST00000512925 POLR2AP24928 1970 aaKnown RBP13.68□□□□□ -0.22
PFDN1-205ENST00000512925 COL4A1P02462 1669 aa13.68□□□□□ -0.22
PFDN1-205ENST00000512925 C6orf229H3BNL8 230 aa13.67□□□□□ -0.22
PFDN1-205ENST00000512925 SULF1Q8IWU6 871 aa13.67□□□□□ -0.22
PFDN1-205ENST00000512925 TBC1D16Q8TBP0 767 aa13.67□□□□□ -0.22
PFDN1-205ENST00000512925 NEFMP07197 916 aa13.66□□□□□ -0.22
PFDN1-205ENST00000512925 PRR29P0C7W0 189 aa13.66□□□□□ -0.22
PFDN1-205ENST00000512925 ZNF296Q8WUU4 475 aaPredicted RBP13.66□□□□□ -0.22
PFDN1-205ENST00000512925 NECTIN2Q92692 538 aa13.66□□□□□ -0.22
PFDN1-205ENST00000512925 ZNF280AP59817 542 aaPredicted RBP13.65□□□□□ -0.22
PFDN1-205ENST00000512925 SCARF1Q14162 830 aa13.65□□□□□ -0.22
PFDN1-205ENST00000512925 PKN2Q16513 984 aaKnown RBP13.65□□□□□ -0.22
PFDN1-205ENST00000512925 ANGEL2Q5VTE6 544 aaKnown RBP13.65□□□□□ -0.22
PFDN1-205ENST00000512925 FAM89AQ96GI7 184 aa13.65□□□□□ -0.22
PFDN1-205ENST00000512925 EYA3Q99504 573 aa13.65□□□□□ -0.22
PFDN1-205ENST00000512925 ISCA1Q9BUE6 129 aa13.65□□□□□ -0.22
PFDN1-205ENST00000512925 BABAM1Q9NWV8 329 aa13.65□□□□□ -0.22
PFDN1-205ENST00000512925 TBC1D8O95759 1140 aa13.64□□□□□ -0.23
PFDN1-205ENST00000512925 PRKAR2AP13861 404 aaKnown RBP13.64□□□□□ -0.23
PFDN1-205ENST00000512925 FKBP1BP68106 108 aa13.64□□□□□ -0.23
PFDN1-205ENST00000512925 MOB2Q70IA6 237 aa13.64□□□□□ -0.23
PFDN1-205ENST00000512925 AKAP11Q9UKA4 1901 aa13.64□□□□□ -0.23
PFDN1-205ENST00000512925 RPS8P62241 208 aaKnown RBP13.63□□□□□ -0.23
PFDN1-205ENST00000512925 GMLQ99445 158 aa13.63□□□□□ -0.23
PFDN1-205ENST00000512925 ZC3H12CQ9C0D7 883 aaKnown RBP13.63□□□□□ -0.23
PFDN1-205ENST00000512925 PODXL2Q9NZ53 605 aa13.63□□□□□ -0.23
PFDN1-205ENST00000512925 ZNF609O15014 1411 aa13.63□□□□□ -0.23
PFDN1-205ENST00000512925 DDX60Q8IY21 1712 aaKnown RBP13.62□□□□□ -0.23
PFDN1-205ENST00000512925 MKI67P46013 3256 aaKnown RBP13.62□□□□□ -0.23
PFDN1-205ENST00000512925 SCN9AQ15858 1988 aa13.62□□□□□ -0.23
PFDN1-205ENST00000512925 TM4SF4P48230 202 aa13.62□□□□□ -0.23
PFDN1-205ENST00000512925 KRT24Q2M2I5 525 aa13.62□□□□□ -0.23
PFDN1-205ENST00000512925 NOM1Q5C9Z4 860 aaKnown RBP13.62□□□□□ -0.23
PFDN1-205ENST00000512925 RSBN1LQ6PCB5 846 aaPredicted RBP13.62□□□□□ -0.23
PFDN1-205ENST00000512925 AGBL3Q8NEM8 1001 aa13.62□□□□□ -0.23
PFDN1-205ENST00000512925 HDAC9Q9UKV0 1011 aa13.62□□□□□ -0.23
PFDN1-205ENST00000512925 SCAF8Q9UPN6 1271 aaKnown RBP13.62□□□□□ -0.23
PFDN1-205ENST00000512925 ATP5J2-PTCD1G3V325 749 aa13.61□□□□□ -0.23
PFDN1-205ENST00000512925 UBE2Q2LH0YL09 131 aa13.61□□□□□ -0.23
PFDN1-205ENST00000512925 GPR25O00155 361 aa13.61□□□□□ -0.23
PFDN1-205ENST00000512925 RIPK4P57078 832 aa13.61□□□□□ -0.23
PFDN1-205ENST00000512925 FBXO46Q6PJ61 603 aaPredicted RBP13.61□□□□□ -0.23
PFDN1-205ENST00000512925 ANKRD13DQ6ZTN6 518 aa13.61□□□□□ -0.23
PFDN1-205ENST00000512925 PLBD2Q8NHP8 589 aa13.61□□□□□ -0.23
PFDN1-205ENST00000512925 PITPNM2Q9BZ72 1349 aa13.61□□□□□ -0.23
PFDN1-205ENST00000512925 MAPK8IP3Q9UPT6 1336 aa13.61□□□□□ -0.23
PFDN1-205ENST00000512925 TRIM28Q13263 835 aaKnown RBP13.6□□□□□ -0.23
PFDN1-205ENST00000512925 RTL5Q5HYW3 569 aaPredicted RBP13.6□□□□□ -0.23
PFDN1-205ENST00000512925 PRAMEF18Q5VWM3 479 aa13.6□□□□□ -0.23
PFDN1-205ENST00000512925 R3HDMLQ9H3Y0 253 aa13.6□□□□□ -0.23
PFDN1-205ENST00000512925 MYOZ2Q9NPC6 264 aa13.6□□□□□ -0.23
PFDN1-205ENST00000512925 SEC31BQ9NQW1 1179 aa13.6□□□□□ -0.23
PFDN1-205ENST00000512925 CHPF2Q9P2E5 772 aa13.6□□□□□ -0.23
PFDN1-205ENST00000512925 HTTP42858 3142 aa13.59□□□□□ -0.23
PFDN1-205ENST00000512925 PAPPA2Q9BXP8 1791 aa13.59□□□□□ -0.23
PFDN1-205ENST00000512925 CHL1O00533 1208 aa13.59□□□□□ -0.23
PFDN1-205ENST00000512925 IRS4O14654 1257 aaPredicted RBP13.59□□□□□ -0.23
PFDN1-205ENST00000512925 USP17L8P0C7I0 530 aa13.59□□□□□ -0.23
PFDN1-205ENST00000512925 CFHR5Q9BXR6 569 aa13.59□□□□□ -0.23
PFDN1-205ENST00000512925 PNNQ9H307 717 aaKnown RBP13.59□□□□□ -0.23
PFDN1-205ENST00000512925 UFL1O94874 794 aa13.58□□□□□ -0.24
PFDN1-205ENST00000512925 NBPF9Q3BBW0 867 aa13.58□□□□□ -0.24
PFDN1-205ENST00000512925 GGA1Q9UJY5 639 aa13.58□□□□□ -0.24
PFDN1-205ENST00000512925 TMPOP42166 694 aaKnown RBP13.57□□□□□ -0.24
PFDN1-205ENST00000512925 HABP4Q5JVS0 413 aaKnown RBP13.57□□□□□ -0.24
PFDN1-205ENST00000512925 GCC1Q96CN9 775 aa13.57□□□□□ -0.24
PFDN1-205ENST00000512925 ANKIB1Q9P2G1 1089 aa13.57□□□□□ -0.24
PFDN1-205ENST00000512925 USP17L3A6NCW0 530 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms