RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 RPTORQ8N122 1335 aa12.81□□□□□ -0.36
CLCN3-208ENST00000512813 EYSQ5T1H1 3165 aa12.81□□□□□ -0.36
CLCN3-208ENST00000512813 PIEZO1Q92508 2521 aa12.81□□□□□ -0.36
CLCN3-208ENST00000512813 CACNA1AO00555 2505 aa12.8□□□□□ -0.36
CLCN3-208ENST00000512813 PTPN12Q05209 780 aaKnown RBP12.8□□□□□ -0.36
CLCN3-208ENST00000512813 TEFQ10587 303 aa12.8□□□□□ -0.36
CLCN3-208ENST00000512813 MTHFSDQ2M296 383 aaKnown RBP12.8□□□□□ -0.36
CLCN3-208ENST00000512813 LRIT3Q3SXY7 679 aa12.8□□□□□ -0.36
CLCN3-208ENST00000512813 DBNDD1Q9H9R9 158 aa12.8□□□□□ -0.36
CLCN3-208ENST00000512813 NUP98P52948 1817 aa12.8□□□□□ -0.36
CLCN3-208ENST00000512813 PRUNE2Q8WUY3 3088 aa12.79□□□□□ -0.36
CLCN3-208ENST00000512813 NBPF26B4DH59 902 aa12.79□□□□□ -0.36
CLCN3-208ENST00000512813 BBOX1O75936 387 aa12.79□□□□□ -0.36
CLCN3-208ENST00000512813 BMP8BP34820 402 aa12.79□□□□□ -0.36
CLCN3-208ENST00000512813 IL13P35225 146 aa12.79□□□□□ -0.36
CLCN3-208ENST00000512813 ZNF280AP59817 542 aaPredicted RBP12.79□□□□□ -0.36
CLCN3-208ENST00000512813 ARHGEF6Q15052 776 aa12.79□□□□□ -0.36
CLCN3-208ENST00000512813 NBPF10Q6P3W6 841 aaKnown RBP12.79□□□□□ -0.36
CLCN3-208ENST00000512813 STAP2Q9UGK3 403 aa12.79□□□□□ -0.36
CLCN3-208ENST00000512813 UBN2Q6ZU65 1347 aa12.79□□□□□ -0.36
CLCN3-208ENST00000512813 TAF1P21675 1872 aa12.78□□□□□ -0.36
CLCN3-208ENST00000512813 LAMA2P24043 3122 aaKnown RBP12.78□□□□□ -0.36
CLCN3-208ENST00000512813 NF2P35240 595 aa12.78□□□□□ -0.36
CLCN3-208ENST00000512813 NKX2-3Q8TAU0 364 aa12.78□□□□□ -0.36
CLCN3-208ENST00000512813 SH3TC2Q8TF17 1288 aa12.78□□□□□ -0.36
CLCN3-208ENST00000512813 NECTIN2Q92692 538 aa12.78□□□□□ -0.36
CLCN3-208ENST00000512813 SCN9AQ15858 1988 aa12.78□□□□□ -0.36
CLCN3-208ENST00000512813 ECE2O60344 883 aa12.77□□□□□ -0.37
CLCN3-208ENST00000512813 NTSR2O95665 410 aa12.77□□□□□ -0.37
CLCN3-208ENST00000512813 ZBTB48P10074 688 aaPredicted RBP12.77□□□□□ -0.37
CLCN3-208ENST00000512813 WASHC4Q2M389 1173 aa12.77□□□□□ -0.37
CLCN3-208ENST00000512813 LDLRAD1Q5T700 205 aa12.77□□□□□ -0.37
CLCN3-208ENST00000512813 PRAMEF18Q5VWM3 479 aa12.77□□□□□ -0.37
CLCN3-208ENST00000512813 NLRP3Q96P20 1036 aa12.77□□□□□ -0.37
CLCN3-208ENST00000512813 GDF15Q99988 308 aa12.77□□□□□ -0.37
CLCN3-208ENST00000512813 KCNQ5Q9NR82 932 aa12.77□□□□□ -0.37
CLCN3-208ENST00000512813 VIL1P09327 827 aaKnown RBP12.76□□□□□ -0.37
CLCN3-208ENST00000512813 SUSD4Q5VX71 490 aa12.76□□□□□ -0.37
CLCN3-208ENST00000512813 ARMC9Q7Z3E5 817 aa12.76□□□□□ -0.37
CLCN3-208ENST00000512813 SSC5DA1L4H1 1573 aa12.76□□□□□ -0.37
CLCN3-208ENST00000512813 LAMB2P55268 1798 aa12.76□□□□□ -0.37
CLCN3-208ENST00000512813 ANKRD36CQ5JPF3 1778 aa12.76□□□□□ -0.37
CLCN3-208ENST00000512813 ERVV-1B6SEH8 477 aa12.75□□□□□ -0.37
CLCN3-208ENST00000512813 KCNQ3O43525 872 aa12.75□□□□□ -0.37
CLCN3-208ENST00000512813 GJA8P48165 433 aa12.75□□□□□ -0.37
CLCN3-208ENST00000512813 OTUD7BQ6GQQ9 843 aa12.75□□□□□ -0.37
CLCN3-208ENST00000512813 IL17REQ8NFR9 667 aa12.75□□□□□ -0.37
CLCN3-208ENST00000512813 SYMPKQ92797 1274 aaKnown RBP12.75□□□□□ -0.37
CLCN3-208ENST00000512813 SCAF8Q9UPN6 1271 aaKnown RBP12.75□□□□□ -0.37
CLCN3-208ENST00000512813 EVI5O60447 810 aa12.74□□□□□ -0.37
CLCN3-208ENST00000512813 SNRPA1P09661 255 aaKnown RBP12.74□□□□□ -0.37
CLCN3-208ENST00000512813 MTFR1Q15390 333 aa12.74□□□□□ -0.37
CLCN3-208ENST00000512813 GUCD1Q96NT3 240 aa12.74□□□□□ -0.37
CLCN3-208ENST00000512813 MYOZ2Q9NPC6 264 aa12.74□□□□□ -0.37
CLCN3-208ENST00000512813 CEMIPQ8WUJ3 1361 aa12.73□□□□□ -0.37
CLCN3-208ENST00000512813 MAP3K15Q6ZN16 1313 aa12.73□□□□□ -0.37
CLCN3-208ENST00000512813 GPTP24298 496 aa12.73□□□□□ -0.37
CLCN3-208ENST00000512813 BCAMP50895 628 aa12.73□□□□□ -0.37
CLCN3-208ENST00000512813 TMC4Q7Z404 712 aa12.73□□□□□ -0.37
CLCN3-208ENST00000512813 AGBL3Q8NEM8 1001 aa12.73□□□□□ -0.37
CLCN3-208ENST00000512813 WNK4Q96J92 1243 aa12.73□□□□□ -0.37
CLCN3-208ENST00000512813 PSME4Q14997 1843 aa12.73□□□□□ -0.37
CLCN3-208ENST00000512813 SYNGAP1Q96PV0 1343 aa12.72□□□□□ -0.37
CLCN3-208ENST00000512813 FARP2O94887 1054 aaPredicted RBP12.72□□□□□ -0.37
CLCN3-208ENST00000512813 GJB1P08034 283 aa12.72□□□□□ -0.37
CLCN3-208ENST00000512813 HMOX1P09601 288 aa12.72□□□□□ -0.37
CLCN3-208ENST00000512813 GRAPQ13588 217 aa12.72□□□□□ -0.37
CLCN3-208ENST00000512813 SLC10A5Q5PT55 438 aa12.72□□□□□ -0.37
CLCN3-208ENST00000512813 GRAPLQ8TC17 118 aaPredicted RBP12.72□□□□□ -0.37
CLCN3-208ENST00000512813 SNX27Q96L92 541 aa12.72□□□□□ -0.37
CLCN3-208ENST00000512813 BDP1A6H8Y1 2624 aa12.72□□□□□ -0.37
CLCN3-208ENST00000512813 BTBD11A6QL63 1104 aa12.71□□□□□ -0.37
CLCN3-208ENST00000512813 GNAT3A8MTJ3 354 aa12.71□□□□□ -0.37
CLCN3-208ENST00000512813 TNFRSF10AO00220 468 aa12.71□□□□□ -0.37
CLCN3-208ENST00000512813 RIMBP2O15034 1052 aa12.71□□□□□ -0.37
CLCN3-208ENST00000512813 DOK7Q18PE1 504 aa12.71□□□□□ -0.37
CLCN3-208ENST00000512813 FAM109BQ6ICB4 259 aaPredicted RBP12.71□□□□□ -0.37
CLCN3-208ENST00000512813 RSBN1LQ6PCB5 846 aaPredicted RBP12.71□□□□□ -0.37
CLCN3-208ENST00000512813 ZNF34Q8IZ26 560 aa12.71□□□□□ -0.37
CLCN3-208ENST00000512813 TDHQ8IZJ6 230 aa12.71□□□□□ -0.37
CLCN3-208ENST00000512813 ALPK3Q96L96 1907 aa12.7□□□□□ -0.38
CLCN3-208ENST00000512813 ZSWIM8A7E2V4 1837 aa12.7□□□□□ -0.38
CLCN3-208ENST00000512813 TESPA1A2RU30 521 aaPredicted RBP12.7□□□□□ -0.38
CLCN3-208ENST00000512813 PRKG1Q13976 671 aa12.7□□□□□ -0.38
CLCN3-208ENST00000512813 PPP1R42Q7Z4L9 355 aa12.7□□□□□ -0.38
CLCN3-208ENST00000512813 SLC10A4Q96EP9 437 aa12.7□□□□□ -0.38
CLCN3-208ENST00000512813 GMLQ99445 158 aa12.7□□□□□ -0.38
CLCN3-208ENST00000512813 PTPN18Q99952 460 aa12.7□□□□□ -0.38
CLCN3-208ENST00000512813 ANGEL1Q9UNK9 670 aaKnown RBP12.7□□□□□ -0.38
CLCN3-208ENST00000512813 IRS2Q9Y4H2 1338 aa12.69□□□□□ -0.38
CLCN3-208ENST00000512813 TMEM265A0A087WTH1 108 aa12.69□□□□□ -0.38
CLCN3-208ENST00000512813 USP17L8P0C7I0 530 aa12.69□□□□□ -0.38
CLCN3-208ENST00000512813 PRMT2P55345 433 aa12.69□□□□□ -0.38
CLCN3-208ENST00000512813 MAP3K11Q16584 847 aa12.69□□□□□ -0.38
CLCN3-208ENST00000512813 NBPF9Q3BBW0 867 aa12.69□□□□□ -0.38
CLCN3-208ENST00000512813 PARP10Q53GL7 1025 aa12.69□□□□□ -0.38
CLCN3-208ENST00000512813 DDX46Q7L014 1031 aaKnown RBP12.69□□□□□ -0.38
CLCN3-208ENST00000512813 EYA3Q99504 573 aa12.69□□□□□ -0.38
CLCN3-208ENST00000512813 POLLQ9UGP5 575 aa12.69□□□□□ -0.38
CLCN3-208ENST00000512813 C6orf229H3BNL8 230 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms