RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 EP400Q96L91 3159 aa12.4□□□□□ -0.42
SNF8-211ENST00000512243 KRT27Q7Z3Y8 459 aa12.4□□□□□ -0.42
SNF8-211ENST00000512243 ARMC2Q8NEN0 867 aa12.4□□□□□ -0.42
SNF8-211ENST00000512243 DDX54Q8TDD1 881 aaKnown RBP12.4□□□□□ -0.42
SNF8-211ENST00000512243 MAP3K5Q99683 1374 aa12.4□□□□□ -0.42
SNF8-211ENST00000512243 NHSQ6T4R5 1651 aa12.39□□□□□ -0.43
SNF8-211ENST00000512243 ADAMTS7Q9UKP4 1686 aa12.39□□□□□ -0.43
SNF8-211ENST00000512243 HSP90AB1P08238 724 aaKnown RBP12.39□□□□□ -0.43
SNF8-211ENST00000512243 NFE2L2Q16236 605 aa12.39□□□□□ -0.43
SNF8-211ENST00000512243 MTHFSDQ2M296 383 aaKnown RBP12.39□□□□□ -0.43
SNF8-211ENST00000512243 NBPF14Q5TI25 921 aa12.39□□□□□ -0.43
SNF8-211ENST00000512243 BPHLQ86WA6 291 aaPredicted RBP12.39□□□□□ -0.43
SNF8-211ENST00000512243 IFNL2Q8IZJ0 200 aa12.39□□□□□ -0.43
SNF8-211ENST00000512243 PHACTR3Q96KR7 559 aa12.39□□□□□ -0.43
SNF8-211ENST00000512243 CYP27B1O15528 508 aa12.38□□□□□ -0.43
SNF8-211ENST00000512243 PHKG2P15735 406 aa12.38□□□□□ -0.43
SNF8-211ENST00000512243 NNTQ13423 1086 aa12.38□□□□□ -0.43
SNF8-211ENST00000512243 AKAP4Q5JQC9 854 aa12.38□□□□□ -0.43
SNF8-211ENST00000512243 MARCH10Q8NA82 808 aaPredicted RBP12.38□□□□□ -0.43
SNF8-211ENST00000512243 MAGEB6P1A0A0J9YX57 407 aa12.37□□□□□ -0.43
SNF8-211ENST00000512243 NR6A1Q15406 480 aa12.37□□□□□ -0.43
SNF8-211ENST00000512243 SIPA1L3O60292 1781 aaPredicted RBP12.37□□□□□ -0.43
SNF8-211ENST00000512243 BCL9O00512 1426 aa12.37□□□□□ -0.43
SNF8-211ENST00000512243 KDM6AO15550 1401 aaPredicted RBP12.37□□□□□ -0.43
SNF8-211ENST00000512243 GNAT3A8MTJ3 354 aa12.36□□□□□ -0.43
SNF8-211ENST00000512243 APAF1O14727 1248 aa12.36□□□□□ -0.43
SNF8-211ENST00000512243 CAPN5O15484 640 aaPredicted RBP12.36□□□□□ -0.43
SNF8-211ENST00000512243 BMP1P13497 986 aa12.36□□□□□ -0.43
SNF8-211ENST00000512243 TMPOP42166 694 aaKnown RBP12.36□□□□□ -0.43
SNF8-211ENST00000512243 LMOD3Q0VAK6 560 aa12.36□□□□□ -0.43
SNF8-211ENST00000512243 MPNDQ8N594 471 aa12.36□□□□□ -0.43
SNF8-211ENST00000512243 PCMTD1Q96MG8 357 aaPredicted RBP12.36□□□□□ -0.43
SNF8-211ENST00000512243 BTAF1O14981 1849 aa12.36□□□□□ -0.43
SNF8-211ENST00000512243 MRC1P22897 1456 aa12.35□□□□□ -0.43
SNF8-211ENST00000512243 TNS1Q9HBL0 1735 aaKnown RBP12.35□□□□□ -0.43
SNF8-211ENST00000512243 ADH1CP00326 375 aa12.35□□□□□ -0.43
SNF8-211ENST00000512243 RFC5P40937 340 aa12.35□□□□□ -0.43
SNF8-211ENST00000512243 SH3BP5LQ7L8J4 393 aa12.35□□□□□ -0.43
SNF8-211ENST00000512243 SH3RF1Q7Z6J0 888 aa12.35□□□□□ -0.43
SNF8-211ENST00000512243 RTF1Q92541 710 aaKnown RBP12.35□□□□□ -0.43
SNF8-211ENST00000512243 RRP7AQ9Y3A4 280 aaKnown RBP12.35□□□□□ -0.43
SNF8-211ENST00000512243 USP17L8P0C7I0 530 aa12.34□□□□□ -0.43
SNF8-211ENST00000512243 RIPK4P57078 832 aa12.34□□□□□ -0.43
SNF8-211ENST00000512243 FAM182BQ5T319 152 aa12.34□□□□□ -0.43
SNF8-211ENST00000512243 FAM196AQ6ZSG2 479 aa12.34□□□□□ -0.43
SNF8-211ENST00000512243 DCAF5Q96JK2 942 aa12.34□□□□□ -0.43
SNF8-211ENST00000512243 RNMTO43148 476 aaKnown RBP12.33□□□□□ -0.44
SNF8-211ENST00000512243 HTATSF1O43719 755 aaKnown RBP12.33□□□□□ -0.44
SNF8-211ENST00000512243 MPRIPQ6WCQ1 1025 aa12.33□□□□□ -0.44
SNF8-211ENST00000512243 EPS8L1Q8TE68 723 aa12.33□□□□□ -0.44
SNF8-211ENST00000512243 CDK15Q96Q40 435 aa12.33□□□□□ -0.44
SNF8-211ENST00000512243 HMX1Q9NP08 348 aaPredicted RBP12.33□□□□□ -0.44
SNF8-211ENST00000512243 PAPPAQ13219 1627 aa12.33□□□□□ -0.44
SNF8-211ENST00000512243 SNRPBP14678 240 aaKnown RBP12.32□□□□□ -0.44
SNF8-211ENST00000512243 ACSBG1Q96GR2 724 aa12.32□□□□□ -0.44
SNF8-211ENST00000512243 C1QTNF2Q9BXJ5 285 aa12.32□□□□□ -0.44
SNF8-211ENST00000512243 GOPCQ9HD26 462 aa12.32□□□□□ -0.44
SNF8-211ENST00000512243 FKBPLQ9UIM3 349 aa12.32□□□□□ -0.44
SNF8-211ENST00000512243 CEMIPQ8WUJ3 1361 aa12.31□□□□□ -0.44
SNF8-211ENST00000512243 ERVV-2B6SEH9 535 aa12.31□□□□□ -0.44
SNF8-211ENST00000512243 WDR4P57081 412 aaKnown RBP12.31□□□□□ -0.44
SNF8-211ENST00000512243 MCM10Q7L590 875 aa12.31□□□□□ -0.44
SNF8-211ENST00000512243 TRIM46Q7Z4K8 759 aa12.31□□□□□ -0.44
SNF8-211ENST00000512243 NGEFQ8N5V2 710 aa12.31□□□□□ -0.44
SNF8-211ENST00000512243 SYTL4Q96C24 671 aaPredicted RBP12.31□□□□□ -0.44
SNF8-211ENST00000512243 RGPD3A6NKT7 1758 aaPredicted RBP12.3□□□□□ -0.44
SNF8-211ENST00000512243 KDM3BQ7LBC6 1761 aa12.3□□□□□ -0.44
SNF8-211ENST00000512243 RGPD4Q7Z3J3 1758 aa12.3□□□□□ -0.44
SNF8-211ENST00000512243 SENP3-EIF4A1A0A087X0R7 540 aa12.3□□□□□ -0.44
SNF8-211ENST00000512243 NR3C2P08235 984 aa12.3□□□□□ -0.44
SNF8-211ENST00000512243 CABP4P57796 275 aa12.3□□□□□ -0.44
SNF8-211ENST00000512243 TEFQ10587 303 aa12.3□□□□□ -0.44
SNF8-211ENST00000512243 DCTN1Q14203 1278 aa12.3□□□□□ -0.44
SNF8-211ENST00000512243 GPKOWQ92917 476 aaPredicted RBP eCLIP12.3□□□□□ -0.44
SNF8-211ENST00000512243 LGR6Q9HBX8 967 aa12.3□□□□□ -0.44
SNF8-211ENST00000512243 TMOD3Q9NYL9 352 aa12.3□□□□□ -0.44
SNF8-211ENST00000512243 UBR2Q8IWV8 1755 aa12.29□□□□□ -0.44
SNF8-211ENST00000512243 TIMP2P16035 220 aa12.29□□□□□ -0.44
SNF8-211ENST00000512243 CCDC27Q2M243 656 aa12.29□□□□□ -0.44
SNF8-211ENST00000512243 IL17REQ8NFR9 667 aa12.29□□□□□ -0.44
SNF8-211ENST00000512243 TRIM47Q96LD4 638 aa12.29□□□□□ -0.44
SNF8-211ENST00000512243 SLC52A2Q9HAB3 445 aa12.29□□□□□ -0.44
SNF8-211ENST00000512243 SENP2Q9HC62 589 aa12.29□□□□□ -0.44
SNF8-211ENST00000512243 TRIM37O94972 964 aa12.28□□□□□ -0.44
SNF8-211ENST00000512243 FSHRP23945 695 aa12.28□□□□□ -0.44
SNF8-211ENST00000512243 GRM5P41594 1212 aa12.28□□□□□ -0.44
SNF8-211ENST00000512243 HNRNPUQ00839 825 aaKnown RBP eCLIP12.28□□□□□ -0.44
SNF8-211ENST00000512243 CALD1Q05682 793 aaKnown RBP12.28□□□□□ -0.44
SNF8-211ENST00000512243 ERFEQ4G0M1 354 aa12.28□□□□□ -0.44
SNF8-211ENST00000512243 ILDR2Q71H61 639 aa12.28□□□□□ -0.44
SNF8-211ENST00000512243 ARHGAP9Q9BRR9 750 aa12.28□□□□□ -0.44
SNF8-211ENST00000512243 THUMPD2Q9BTF0 503 aaKnown RBP12.28□□□□□ -0.44
SNF8-211ENST00000512243 LY75O60449 1722 aa12.28□□□□□ -0.44
SNF8-211ENST00000512243 KCNQ2O43526 872 aa12.27□□□□□ -0.45
SNF8-211ENST00000512243 PDXDC2PQ6P474 469 aa12.27□□□□□ -0.45
SNF8-211ENST00000512243 VASH1Q7L8A9 365 aaPredicted RBP12.27□□□□□ -0.45
SNF8-211ENST00000512243 ZFAND3Q9H8U3 227 aa12.27□□□□□ -0.45
SNF8-211ENST00000512243 NR5A1Q13285 461 aa12.26□□□□□ -0.45
SNF8-211ENST00000512243 SF3B2Q13435 895 aaKnown RBP12.26□□□□□ -0.45
SNF8-211ENST00000512243 WWC1Q8IX03 1113 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms